Nyctereutes procyonoides (raccoon dog): 129494754
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Entry
129494754 CDS
T09008
Symbol
TOPORS
Name
(RefSeq) E3 ubiquitin-protein ligase Topors
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npo04121
]
129494754 (TOPORS)
03036 Chromosome and associated proteins [BR:
npo03036
]
129494754 (TOPORS)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
npo03037
]
129494754 (TOPORS)
Enzymes [BR:
npo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129494754 (TOPORS)
Ubiquitin system [BR:
npo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129494754 (TOPORS)
UBL E3 ligases
129494754 (TOPORS)
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
129494754 (TOPORS)
Cilium and associated proteins [BR:
npo03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
129494754 (TOPORS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI_Topors
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
RING_XB3-XBAT31
Rad50_zn_hook
TRI4_N
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
129494754
NCBI-ProteinID:
XP_055157751
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MGSQQPPGSPLSREEGEAPPPAPAPEGRRRSRRVRLRGSCRHRPSFLGRRELGSSAPAGP
APVSSEIMASAAKEFKMDNFSPKAGTSKLQQTVPADASPDSKCPICLDRFDNVSYLDRCL
HKFCFRCVQEWSKNKAECPLCKQPFDSIFHSVRAEDDFKEYVLRPSYNGSFATPDVPRFR
YRTTMTRDRSASVYSPNSTMSRRTTTPPDSGVLFEGLGISTRPRNGEIPQLMRQIAVRRP
TTADERSLRKIQEQDIINFRRTLYRAGARVRNIEDGGRCRDISAEFFRRNPACLHRLVPW
LKRELTVLFGAHGSLVNIVQHIIMSNVTRYDLESREFVSDLRPFLLNRTEHFIHEFISFA
RSPFNMAAFDQHANYDCPAPSYEEGSHSDSSVITISPDEAETQELDINVTTVSQAPWDDE
TPGPSYSSSEQVHAAMSSLLNTSDSSDEELVTGRATSQIQGVQTNEDLNNDSDSSSDNCV
IVGFVKPLAERTPELVELSSDSEELGSYEKMETVKTQEQSYSSGDSDVSRCSSPHSVLGK
DEQINKGQCGSGKRIKSKKEEKHSTSLSSPRDLSSSIRGDRVYSPYNRRHRRRGRSRSSD
SRSQSRSGHDQKSRRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRSQTLS
LSSESTSRSRSRSSDHGKRRSRSRNRDRYYLRNNYGSRYKWEYTYYSRNKDRDGYESSYR
RRTLSRAHYSRQSSSPEFRIQSFSERTNARKKNNHSERKYYYYERHRSRSLSSNRSKTAS
TGPDWVRNEKPGGKRKYKTRHLEGTNEVAQPSREFASKVKESHYQKSSSKLDGNHKNESD
SFSDSRSSDRETKHKRRKRRTRSLSVEIVYEGKATDTTRHHKKKKKKHKKKHKKHHGDNG
SRSPVVITIDSDSDKDSEVKEDTECDNSGPQDPLQNEFLPPPLEPFEAKDVVTIEDEFGI
LDKECTISTLNDNLNNANKTVDDIPPQAASVEQTLDVREESTFASDLENQPSNVAIHTEP
SRQLPSPRTSLMSVSLGRDHDMS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgcagcagccgccggggtctccgctgtctcgcgaggagggtgaagcgcccccg
cctgctcccgcgcctgagggccggcggcgaagtcgccgggtacgccttcgcggatcctgc
cgtcatcgacctagctttctgggccgccgggagcttggctcgagcgcgccagccgggcct
gcgccggtatcctccgagataatggcatcagctgctaaggaatttaaaatggacaacttt
tcacctaaagctggtactagcaaattgcaacagacagtaccagctgatgcatctcctgat
tctaagtgtcctatatgtttggatagatttgataatgtgtcttacttagatcgctgttta
cataagttctgttttcgctgtgtacaggagtggtcaaaaaacaaagctgaatgtccacta
tgtaaacagccctttgattctattttccattctgtgagggcagaagatgacttcaaggag
tatgtcctaaggccttcatataatggttcttttgcaacccctgatgttccacgatttcgc
tatcgtacaactatgacaagagatcgaagtgcttctgtttattcacctaatagtactatg
agtagaagaacaacaactccaccagatagtggagtactatttgaggggttaggcatttca
acaagacctagaaatggtgaaattcctcaacttatgagacagattgcagtaaggaggcca
actactgcagatgaaagatctttgcggaaaattcaagaacaggatattattaattttaga
cgaactctttatcgtgctggcgcccgtgttagaaatattgaagatggtggtcgctgcagg
gatatttcagctgaatttttccgtagaaatccagcttgccttcacagattagtcccctgg
ctaaaacgtgaacttacagttctttttggagctcatggatctttagtgaatattgtccag
cacatcatcatgagtaatgttactcgctatgacttggaaagtcgggaatttgtgtctgac
ttaagaccatttctgcttaatcggactgagcattttatacatgaatttatcagttttgct
cgatctccttttaacatggcagcttttgaccagcatgctaattatgattgccctgctcct
tcatatgaagaaggtagccattctgattcttcagtcataacaatatctcctgatgaagct
gagactcaagagttagatatcaatgtaaccactgttagtcaggcaccgtgggatgatgaa
actccagggccatcttactcaagctcagaacaggtacacgctgccatgtcttccctttta
aatacttctgatagttcagatgaagaacttgtaacaggaagagccacatctcagatacaa
ggagtacaaactaatgaagacctcaataatgacagtgattcttcttcagataattgtgtc
attgttgggtttgttaaaccactagctgagaggaccccagaacttgttgaactgtcctct
gattctgaggagttaggctcttatgagaaaatggagactgtgaagacacaagaacagtct
tatagttctggtgatagtgatgttagtagatgctcatctccacactctgtccttggaaag
gatgagcaaataaataaaggtcaatgtggttctggtaaaagaatcaagtcaaagaaagaa
gagaagcactctacatcattgtcatctcccagagacctgagctcgtctatcagaggagac
agggtatattccccatataaccgtagacacaggaggaggggaagatcaagaagttcagat
tctcgttcccagagtagaagtgggcatgatcagaagagtcgtagaaagcatcatgggaag
aaaaggatgaaaagcaaaaggtccaggagcagggagagtagcagacctagaggtagaagg
gacaagaagagatcaagaactagagacagcagttggtcaagaagaagtcagactctctct
ctcagtagcgaaagcacaagcagatcaagatctcgtagcagtgatcatggtaaaagaaga
tcacggagcagaaatagagatcgttattatttaagaaataattatggaagcaggtataag
tgggagtatacttactatagtagaaacaaggacagggatggctatgaatcatcttatagg
aggaggactctgtccagagctcattattccagacaatcttcaagtccagaatttagaatt
cagtccttttctgaaagaacaaatgctaggaaaaaaaataatcacagtgaaaggaagtat
tactactatgaaaggcacagatcaagaagcttgtccagtaatagatcaaaaactgcatct
acagggcctgactgggtaagaaatgaaaagcccggagggaaacgaaaatacaaaacacgg
catttggagggtactaatgaagtggctcaaccttctcgtgagtttgcttctaaagtaaag
gaaagtcattaccaaaagtcctcatcaaaattggatggcaaccataaaaatgagagtgac
agcttttcagacagccgatcatcagacagagagacaaaacacaaaaggagaaaaaggagg
acccggagcctaagtgtagagatagtttatgagggcaaagctactgatacaactaggcat
cataaaaagaaaaagaagaagcacaagaagaagcataagaaacatcatggggacaatggt
tcacgttcgccagttgtaattaccattgacagtgatagtgataaggattctgaagtaaag
gaagatacagaatgtgacaatagtggtcctcaggaccctctacaaaatgagtttttgcct
cctcccttggaaccatttgaagctaaagatgtagttacaatagaagatgaatttggcatc
ctagacaaggagtgtactatttccacacttaatgacaacttgaataatgccaacaaaact
gtggatgatattccaccccaggcagcttcagttgaacagactcttgatgtaagagaagag
agtacttttgcctctgatttggagaaccagcccagtaatgttgctattcacactgagcca
tcaaggcagttgccgtctccacggacatcgttaatgtcagtatctcttggtagagaccac
gatatgtcttaa
DBGET
integrated database retrieval system
