Nyctereutes procyonoides (raccoon dog): 129494860
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Entry
129494860 CDS
T09008
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03440
Homologous recombination
npo03450
Non-homologous end-joining
npo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129494860 (RAD50)
03450 Non-homologous end-joining
129494860 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
129494860 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npo03032
]
129494860 (RAD50)
03400 DNA repair and recombination proteins [BR:
npo03400
]
129494860 (RAD50)
DNA replication proteins [BR:
npo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
129494860 (RAD50)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
129494860 (RAD50)
BRCA1-C complex
129494860 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
129494860 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
ABC_tran
AAA_29
DUF2703
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
129494860
NCBI-ProteinID:
XP_055158032
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYVCTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLRFRDVNGELIAVQRAMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQINSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFSERHIKNFHKLVRERQEREAEIASQLMNDFAE
KETLKQEQIDEIRDKKTGLGRIIELKSEILSKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEVLKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDITIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKMELNRKLIQDQQEQIQYLKSTTNELKSEKLQISTNLQRRQQMEEQTVELSTEVQS
LSREIKDAKEQLSPLETILEKFQQEKEELINKKNKSNKIAQDKMNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNQVIAQLSECEKHKENINKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVTCNVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattttgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaacggggcg
gggaagacgaccatcattgaatgtctaaaatatgtttgtactggcgattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcggtttcgtgatgtcaatggagaacttatagctgtgcagagagctatg
gtgtgtactcagaaaagcaaaaagacggaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggtgtttccaagtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgagggaaaggccctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacacttcggcaggtacgtcagacacaaggt
cagaaagtaaaagaatgtcaaacagaattaaaatatttgaagcaaaataaggaaaaagct
tgtgagatacgtgatcagattaatagtaaggaagcccagttaacatcatcaaaggaaatt
gtgaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctctctaaaataatgagacttgacaatgaaattaaagccttggatagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaagggact
gatgagcaactaaatgacctatatcataatcaccagagaacagtaagggagaaagaaagg
agactggtagactgtcagcgtgaactggaaaagttaaataaagaatcaaggcttctcaat
caggaaaaatcagaactccttgttgagcagggtcgtctacagctacaagcagatcggcat
caagaacatatccgagctagagattcattaattcaatctttggcaacacagctagaattg
gacggctttgagcgtggaccattcagtgaaagacatattaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcagaaattgccagccaactgatgaatgactttgcagaa
aaagagactctgaaacaagaacagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaagtaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcagacaggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagttcta
aaaacagaagtaataagccttcaaaacgagaaagcagacctagataggaccctgcgtaaa
ttggaccaggagatggaacagttaaaccatcatacaacaacacgcacccagatggaaatg
ctgaccaaagacaaagctgacaaagatgaacaaattagaaaaataaaatctcgacacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagactggccaaattgaacaaagaa
ctagcttcggctgagcaaaataaaaatcatataaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggactttgaaagt
gatttagacaggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggct
ggagctacagcagtttactctcaattcattactcagctaacggatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcaaacagaagctgaattacaggaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactcaagtcaacagaatcagaactaaag
aaaaaagaaaagcggcgtgatgaaatgctgggacttgtccctatgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcgcttaaagaatgacatagaggaacaggaaacgctcttaggcacaataatgcct
gaagaagaaagtgctaaagtttgtctgacagatattacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctgcaaggactagac
ttggatagaactgttcaacaagtaaaccaggaaaaacaagaaaaacaacacaaattagat
acagtttccagtaagatggaattgaatcgtaagcttatacaggaccagcaggaacagatt
caatacctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatccactaat
ttacaacgtcgtcagcaaatggaggaacagactgtggaattatccactgaagttcagtcc
ttatccagagagataaaggatgctaaagagcagttaagccctttggaaacaatattggag
aagttccaacaggaaaaagaagaattaatcaacaaaaaaaataaaagcaacaaaatagca
caggataaaatgaatgatatcaaagaaaaggttaaaaatattcatggttatatgaaagac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaactt
aatcaagtaatagctcaactaagtgaatgtgagaaacacaaagaaaatataaataaagaa
atgggaatcatgagacaagatattgatacacagaagatccaagagagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcaataggacgacagaaaggt
tacgaggaagaaattattcattttaaaagagaacttcgagaacctcaatttcgggatgca
gaggaaaagtacagggaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctcgacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaaatg
gaggaaatcaacaaaattatacgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtctgatgccgatgaaaatgtatccgcttctgataaaaggcgg
aattataactaccgcgtggtgatgctaaaaggagacacagctttggatatgagaggacga
tgcagtgctggacaaaaggtactggcctcactcatcattcgtctggcgttagctgaaaca
ttctgcttgaactgtggcatccttgccttggatgagccaacaacaaatcttgaccgagaa
aacattgagtctcttgcacatgctcttgttgagataattaagagtcgctcacagcagcgt
aacttccagcttctggtcatcactcacgatgaagattttgtagagctcttaggccgctct
gaatatgtggagaaattctacaggattaagaagaacatcgatcagtgctcagagattgtg
acatgtaatgttagctccctgggttcttacgttcattaa
DBGET
integrated database retrieval system
