Nyctereutes procyonoides (raccoon dog): 129494892
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Entry
129494892 CDS
T09008
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04512
ECM-receptor interaction
npo04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129494892 (FREM1)
04518 Integrin signaling
129494892 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
npo04091
]
129494892 (FREM1)
Lectins [BR:
npo04091
]
C-Type lectins
Lecticans
129494892 (FREM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
IGF2_C
1-cysPrx_C
Motif
Other DBs
NCBI-GeneID:
129494892
NCBI-ProteinID:
XP_055158091
LinkDB
All DBs
Position
Unknown
AA seq
2183 aa
AA seq
DB search
MSSPNWSGHSALLLLLLLLLLNWASPSFISLNRGVRVMKGSSAFLSGDDLKFAIPKEKDA
CKVEVVMNEPMTQRVGKLTPQVFDCHFLPNEVKYIHNGCPILDEDTVKLRLYRFTETDTF
TETFILRVYLLEPDCNIIRKSNNVLEVSEFYGLSGAIDKNLLRFDYERTAGLECTVRLDP
VGSRLPAHGQVVLLEPRPEKPRGDQPHSFFPKSQLGTELRCPGGSCALGLKKMGSVNVSC
EEFLLMGLHYQHTDPPSPNIDYISIQVDLTDGRSKIVYKSESAWLPVYIRPGIPNQIPRA
AFMAMFTLEVDQFILTSLTTSVLDCEEDETPKSLLVFNITKAPLQGYVTHLWDHTRPVSS
FTWKDLSDLQIAYQPPNSSHSVRRHYEVEVEVYDFFFERSVPITVHISIRTADTNAPRVS
WNTGLSLLEGQSRAITWEQFQIVDNDDIHAVQLVTVGGLHHGRLTLRGGKGFLFTVADLQ
AGVVRYHHDDSDSTKDFVIFRIFDGHHSIRHKFPINILPKDDSPPFLISNVVIELEEGQT
ILIQSSMLRASDMDSSDDYIYFNITKPPQAGEIMKKPGPGLIGYPVPGFLQRDLFNGIIY
YRHFGGEVFEDSFEFVLWDSHEPPNFSVPQVVTIHITPVDDQLPKEAPGVSRHLVVKETE
VAYITKKHLHFIDTEYNRELLYTITTPPFFSFGHRHLDAGKLIMVDSISKLTKNSAARGL
RSFTQHAVNHMKVAYKPPMQDMGLNPGYVQFAFSISNQRGGTLHGICFNITILPVDNQVP
KVFTNPLRVAEGAQCVISTENVLISDVDTKLDSIYLSLQRLPQCGRVELEGFPLNIGDIF
SWGDLHALKVRYQHDGSEILQDDIFLEVTDGTNSAEFILHIEVFPVNDELPILKTDLIPM
IHCSEGEEVVITSEYIFATDVDSDDLKLMFVIAQKPQHGVVRKAGVTVDQFSQGDVISGA
VTYKHTGGEIGLVPCFDTITLVVSDEEAGPFVNGCCYNGPHPSIPLHESFPVYDLNITVH
PVDNQSPSIAIGTMFVVDEGFSAAVTINHLSATDPDTATDDLEFVLVSPPQFGYLENTLP
SAGFEKSNMGISIASFPWRAMKALHINYVQARHLRMEPTADQFMVYVTDGKQRSLEIPFY
IIINPMNDEAPDFVVQNITVCEGQMKELESSTINAADLDVPKDPLLFSITHKPRHGLLIN
RVLSKDFPQNKQSVNPDQKHELVQNFSLELLKNGMKLMYVHDDSETLADDFTIQLSDGKH
KILKTISVEITPVNDEKPMLSKKAEITMKMGETRIISSAVLSAIDKDSPREKIYYLFERL
PQNGQLQLKTGRDWVPLYPGMKCTQEEVDLNLLRYAHTGAMDSQDQDSFTFYLWDGDNRS
PAFDCHITIKDMGKGDIVILVKPLVVSKGDRGFLTTTTLLAVDGTDKPEELLYVITSPPR
YGQVQYVRYPGVPITSFSQMDIAGQTVCYVHKSKAAVSRDTFRFIVSNGLQTKHGVFEII
LETMDRALPVVTRNRGLRLDEGTTGLLSPDILQLTDPDTPAENLTFMLAQLPQHGQLYLR
GTVLLQHNFTQQDVDSRNVAYRHLGGDSQVDCFTFVATDRTNQGFVVDGRVGQEPVSFTI
QVDQLDKTAPHITHLHSPSQVVLLKNGCYGIYLTSHVLKASDPDTNDDLIIFKILRGPQH
GHLENTTTGEFIHEKFVQKDLNSKTILYIINPSLEVNSDIMEFQIMDPTGNSATPQILEL
KWSHIEWSQTEFEVCESVGMLPLEITRRGYSMDSAFVSVKVNQVSATVGKDFTLTPSKLI
QFDPGMSTKMWNIAITYDGLEEDDEAFEVILNSPVNAVLGTKTKAAVKILDSKGGQCHPS
YSFNPNKHNAREKGIWHPLSPGSSSSTTSGSFHLERRPLPSSKRPAVTRGDTGQGFDSAD
PSRMKLRTQGNGKTVLPSSVYRNGTDIIYHYNGMVSQKLEGDSSPSRKRKAKVAITSQPQ
KTSQVAALPQADKMESTSDSHFSRQDRLPSIPKDCTPELKGLLHFHESLRKLYKCDGITW
KAWSPQTEEVEGEACPAGWHHHSGYCHSLVTEQKGTWSTAAQACKEHHQGSLVTVLSRQH
MRWLWDISGRRPFWIGLNDQVHAGHWEWIGGEPVTFTNWRKGPPQRLKRGKDCVLAQRQG
KWQAQDCRKGKPYNYVCSRKLQM
NT seq
6552 nt
NT seq
+upstream
nt +downstream
nt
atgagctctccgaattggagtgggcacagtgccttgctgttgttgctgctgctgcttctc
ctaaactgggccagtccctccttcatcagccttaaccgcggggtcagggtgatgaagggc
agctctgccttcctgtcgggagatgacctgaagtttgccatccccaaagaaaaagatgct
tgcaaagtggaagttgtgatgaacgagccaatgacccaaagggttgggaaactcactcca
caggtctttgactgccatttccttcccaatgaagtaaagtatattcacaatggttgcccg
attcttgatgaagatacagtgaagcttagactttacagatttactgagacagataccttc
acggaaacctttatcctgcgggtctatctcctggaaccagactgtaacatcatccgtaag
agtaacaatgtactggaggtgtcagaattctacggcctgtccggagccattgataagaac
ctgctcagatttgattacgagaggacggctggcctggagtgtacggtcaggctggatcct
gtggggagccggctgccagcccacggtcaggtggtcctgctggagcctcggccagagaaa
cctcggggagatcagccacacagttttttccctaagtctcaactgggaacagagctgagg
tgtccaggtggaagctgtgccctgggactgaagaaaatgggaagtgtcaacgtgagctgt
gaggagttcctgttgatggggcttcattatcaacacacagatcccccttctcccaacatc
gactacatctccatccaggtggacctcacagatggcaggagcaaaatcgtatacaagtca
gagagtgcgtggttgcccgtctatatcagacctggcattcctaatcagattccaagggct
gcgttcatggccatgtttactctggaagtggatcagttcatcctgacctctttgactaca
tccgttctggattgtgaagaggacgagaccccaaagtccttgctggtgtttaacattact
aaagcgccactccagggctacgtgactcatctctgggatcacaccagaccggtctcctca
ttcacctggaaagatctcagtgacctgcagatagcctatcagccaccgaatagcagccat
tctgtgcggagacattacgaggtggaggtggaggtttatgacttcttctttgaaaggagt
gtgcctattacggtccacatctccatcagaacagcagatacaaatgccccgagagtgtcc
tggaacacaggtctgagtcttctagaggggcagtctcgggccatcacttgggaacagttt
cagattgtcgacaatgatgacatccatgctgtccagctggtcaccgtgggcggcctgcac
catggacgacttacactaagaggcggcaaaggatttctcttcactgtggctgaccttcag
gctggagttgttcgctatcatcatgatgatagtgactccaccaaagattttgtgatcttc
aggatattcgatggccatcacagcatccgccataagtttcccatcaacattttgcccaaa
gatgatagtcccccatttctcataagcaatgttgtgattgaactggaggaagggcagacc
atactgatccagagttctatgctgagagcatcagacatggactccagtgatgactacatc
tactttaatatcacgaaacctcctcaggctggagagatcatgaagaagccagggccagga
ctgataggctatcctgtccctggcttccttcagagggatctatttaatggcatcatttac
tatcgtcactttggtggagaggtctttgaagactcttttgaatttgtcctgtgggacagc
catgaacctccaaatttctcagtgccacaggtggtgaccatccatatcactccagtggat
gaccaacttccaaaggaggctcctggagtttctcggcatttggttgtcaaggaaactgag
gtggcctacataactaagaaacatctacattttatagatacagaatataacagggagctt
ctctacacgataacgacacctccgtttttctctttcggccacagacatctggatgctggg
aaattaattatggtggatagcatttcaaagctaactaaaaattctgcagcccgagggctg
agatcattcactcagcatgctgtaaaccacatgaaagtggcctacaagccacccatgcaa
gatatgggcctcaatccaggatatgttcagtttgcattttccatcagtaaccagcgtgga
ggcactttgcatgggatctgctttaacatcacaattcttccagtggacaatcaagttcct
aaggtgtttaccaaccccctaagagtggctgagggagctcaatgtgtcatcagcacagaa
aatgttctgatttctgatgtggataccaaactggacagcatctacctctccctacaaaga
ctgcctcagtgtggaagagtggagctggaaggatttcctctaaacataggagacatattt
tcttggggagacctccatgccttaaaagttaggtatcagcatgatggatctgagatactt
caggatgacatattcttggaggtcacagatggcacgaattcagcagaatttattctacac
attgaggtattccctgtaaatgatgagctaccaatcctaaagactgacctcattcccatg
atacattgctcagagggcgaagaggtagtcatcacctctgaatacatttttgctactgat
gtggacagtgatgacttgaaactgatgtttgtgattgctcaaaagcctcaacatggggtg
gtgaggaaggctggagtcacagtggatcagttctctcagggagatgtcatctcgggggct
gtgacatacaaacacacgggtggtgagattggcctggtgccttgttttgataccattaca
ttggtggtttcggatgaagaagctggcccttttgtgaatggctgttgctacaatgggcct
catccatctattcctcttcatgagtcctttccagtgtatgacctcaacatcacagtacat
ccagtggacaaccagtcaccttcaatcgcaattggtaccatgtttgtggtagatgagggt
ttctccgcagccgttaccattaaccatttgtccgccactgaccctgacactgcaacagat
gacttggaatttgttttggtttctcctccccagtttggctaccttgaaaacacacttcct
tctgcaggttttgaaaaaagcaatatgggcataagcatagcttcgttcccgtggagagcc
atgaaggctttgcacattaactatgtgcaggctaggcatctaaggatggaaccgacggct
gaccagttcatggtgtatgtcacagatgggaagcaacgctccttggagataccattttac
attataatcaaccccatgaatgatgaagctcctgactttgtagtgcagaatattactgtg
tgtgagggtcagatgaaagaactggaatcctccaccatcaatgcagctgatctggatgtt
cccaaagaccccttgctgttcagcatcactcataaaccacgccatggcctcctcatcaac
agggtgcttagcaaagactttcctcaaaataagcagtctgtcaaccctgaccagaagcac
gaacttgttcagaacttttccttggaacttctcaagaatggaatgaagttgatgtatgtg
catgatgactcagagactcttgctgatgactttacaatccagttgtcagatgggaaacat
aagatattaaaaaccatttcagtagagatcaccccagttaatgatgagaaaccaatgctg
agcaagaaggctgaaattacaatgaaaatgggtgaaactcgaattatttctagtgctgtt
ctttcagccatagataaagactcacccagggagaagatttactatttatttgaaaggctt
ccacaaaatgggcaacttcaacttaagacagggagggactgggtccctctctaccctggc
atgaagtgcactcaggaagaagtggatttgaacttgctgagatatgcacacaccggggca
atggattcccaggaccaagacagctttaccttctacctctgggatggtgacaacagatca
ccggcatttgactgtcacatcaccatcaaggatatgggaaaaggtgatattgtcatcctt
gtgaaaccgctggtggtgtctaaaggtgatcgaggtttcttgacgaccaccactctcctt
gctgtggatggaacagacaaacccgaggaactactctatgtcatcacctcccctccacgg
tatggccaggtccagtatgtccgctatcctggagttcccattacaagcttcagccaaatg
gacatagcaggacagacagtctgctatgtacataagagtaaggcagctgtctcccgtgac
accttcagattcatcgtcagcaatggcctgcagaccaaacatggggtgtttgagatcata
ctggagaccatggacagagccttacccgtggtgaccaggaacagggggctgagactggac
gaagggaccacgggcctgctctcccctgacatcctccagctgaccgaccctgacacccca
gcggagaacctcaccttcatgttggcccagctcccacaacacggccagctttacctgcgg
gggacagtgctgcttcaacacaacttcacccagcaggacgtggacagcagaaatgtggcc
tataggcacttgggaggagactcccaggtggactgctttacgtttgtggccactgataga
acgaaccaaggcttcgttgtggatgggagagtgggacaagaacctgtatcattcaccatc
caggttgaccagttggacaaaacagccccccacatcacacatttgcattccccttctcaa
gtggtgctcctgaaaaatggctgttacgggatttacctcacttcccatgtgctgaaggca
tcggaccctgacaccaatgatgatctgatcatctttaagattttacgaggcccccaacat
ggacatctggagaacacaaccacaggtgaatttatccatgagaaatttgtccaaaaggac
ttaaacagtaagaccattctttacatcataaacccatctttggaagtgaattcagatatc
atggaattccaaatcatggaccccacagggaactctgctactcctcaaattttggaacta
aaatggtctcatattgagtggtcacagacggaatttgaggtctgcgagagtgtgggcatg
ttgcccttggaaattaccagaaggggatattccatggactcagccttcgtgagcgtaaag
gtcaaccaggtgtcagctacagttggaaaagacttcactctgactccatctaaactgatt
cagtttgacccaggaatgtcaactaagatgtggaatatagcaattacctatgacggatta
gaggaagacgatgaggcctttgaagtaattctgaactcccctgtgaatgcagttcttggc
accaagacaaaagctgcagtgaaaattttggactcaaaaggaggacagtgtcatccttca
tattccttcaacccaaacaagcacaatgcaagggagaagggcatttggcacccgctgtcc
ccagggtcttcctcatccaccacttctggttcctttcatctggaaagaagaccccttcca
tcttccaagcggccagcagtcactaggggagacaccgggcagggctttgattctgcagat
ccgtctcgtatgaagcttaggacccaagggaatggcaaaacagttcttccatcctctgtt
tatagaaatggaaccgacatcatctatcattataatggaatggtttcccagaagctggag
ggagacagttctccgtctcgcaaaaggaaggccaaagtagccatcaccagtcagccacaa
aagacaagccaagtggcagcgctgcctcaagcagataagatggaatccacaagtgactca
cacttttccagacaggaccgattgccctcaattccaaaggactgcacaccggaattaaag
ggacttctccacttccacgaaagcctccggaaactgtacaagtgtgatggaattacctgg
aaagcctggagcccccaaaccgaggaggtggaaggtgaagcctgcccagctgggtggcac
catcattcaggctactgccactctttggtcacagagcagaagggcacctggagcactgct
gcccaagcttgcaaggaacatcaccaaggcagccttgtaactgttctctccaggcagcac
atgcgatggctttgggacatcagtggaagaaggcccttctggataggtttgaatgaccaa
gtgcatgctggccactgggagtggattggcggggaacctgtcaccttcaccaactggagg
aaagggccccctcaacgtttaaagcgtggcaaggactgtgttttggctcaaagacaaggg
aaatggcaagcgcaggactgtaggaagggcaaaccttacaattacgtgtgctccaggaaa
ctccagatgtaa
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integrated database retrieval system
