Nyctereutes procyonoides (raccoon dog): 129494991
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Entry
129494991 CDS
T09008
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129494991 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npo03041
]
129494991 (DDX46)
Enzymes [BR:
npo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129494991 (DDX46)
Spliceosome [BR:
npo03041
]
Complex A
U2 snRNP components
U2 related factors
129494991 (DDX46)
Complex B
129494991 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
129494991
NCBI-ProteinID:
XP_055158237
LinkDB
All DBs
Position
Unknown
AA seq
1031 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKAENRSRS
KEKTDSGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL
AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE
YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
QPTNKGRYKVL
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgagtcacgccactatcgaaagcgatcggcatcaagggggcgctctggaagt
cgttctagaagtcgctcaccctcagacaaaagaagtaaacgtggagatgacagacggtct
agaagcagagatagagatagaaggagagagaggtctcgtagcagagataaaagaagatct
cggtcaagagaccggaagcgcctgaggcgttccagaagtagagagagagacagaagtcga
gagcgaagaagatctcgaagtcgagacaggagacgctcaaggagtagaagccgaggccgg
cgatccagatcctccagtcctggcaataaaagcaagaaagctgagaataggtctagatcc
aaagagaaaacagatagtggggaaagttctaaagagaagaaaaaggacaaagatgacaag
gaggatgaaaaagaaaaagatgctggcaattttgatcagaataagctggaagaagaaatg
agaaagcgaaaagaaagagttgaaaagtggcgagaagagcaacgtaaaaaggccatggaa
aacataggagaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagttta
gaagatgatgatgatgatgaagatgatcctgcggaagctgaaaaggaaggaaatgaaatg
gaaggtgaggagttagatccattagatgcttacatggaagaagtaaaagaagaagtaaag
aagtttaatatgagaagtgtgaaaggtggtgggggaaacgaaaagaagtctgggcctaca
gtcaccaaagttgtcactgttgtaacaaccaaaaaagcagtggtagattctgataagaag
aaaggtgaactgatggagaatgaccaggatgccatggagtattcttcagaggaggaagaa
gttgatcttcagacggctcttacaggctatcagacaaaacagagaaagcttctagaacca
gtggaccatggaaaaattgaatatgaaccattcagaaaaaacttttatgttgaagttcca
gaattagcaaaaatgtctcaagaagaggtaaatgtatttcggttggaaatggagggcatc
actgtcaagggaaaaggttgtcccaaaccaattaaatcttgggtccagtgtggaatttcc
atgaagatcttaaattctctcaaaaagcatggctatgaaaagcccacaccaattcagacc
caggcgattcctgctataatgtccggacgagatttgattggtattgccaagacaggaagt
ggaaagaccattgcttttctgttacccatgtttagacacatcatggatcagaggtcatta
gaagaaggagaggggccaatagctgtcatcatgactccaactcgagaactggctttacaa
attactaaagaatgtaagaagttttcgaagaccctgggacttagagtggtttgtgtttat
ggaggaacaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtt
tgcacacctggtcgaatgattgacatgttagcagctaacagtggtcgtgtcacgaatctt
cgaagagtgacatatgttgttttagatgaagcagacagaatgtttgacatgggttttgaa
ccacaggtcatgcgcattgtggataatgtccgtcctgatcgacagacagttatgttttca
gctacttttcccagagctatggaggctttggctcgcagaatcctgagtaaacccattgaa
gtgcaggttggaggcaggagtgtggtttgctcagatgtagagcaacaagtgattgtgatt
gaagaagaaaagaaattcttgaagttgcttgagcttcttggccattatcaagaatcagga
tcggttattatatttgtggataagcaagaacatgctgatggtcttctgaaagatttaatg
agagcatcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagc
atcataaatgactttaagaatgggacgtgcaaacttctcgtagctacttctgttgctgcc
cgaggtctagatgtgaaacatctgattcttgtagtaaattacagctgccccaaccattat
gaggattatgtgcacagagcaggacggactggaagagcaggcaataaaggttatgcatat
acttttatcacagaagatcaagctcgctatgccggtgacataattaaagcgcttgaatta
tcaggaactgcagtgcctccggatctggagaaactttggagtgatttcaaagatcaacag
aaagctgaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagttt
gatgaaacagaacaagctttggctaacgagaggaagaagttgcaaaaagcggctcttggt
ctgcaagactcagatgatgaggatgctgcagttgatattgatgaacaaattgaaagcatg
tttaattcaaagaagagagttaaagacatggctgctcctggaacatctagcgtccctgct
ccaactgcaggaaatgctgagaaattagaaattgctaagagattggctcttagaatcaat
gctcagaagaatttgggcattgagtctcaggatgtgatgcaacaggctaccaatgcaatt
ctcagaggtggcaccatcctggctcccactgtgtctgccaaaaccattgcagagcaactt
gctgaaaagatcaatgccaagctcaattatgtgcctttggagaaacaagaagaggaaaga
caggatggtggacaaaatgagtcttttaagagatatgaggaagaattagagatcaatgac
ttcccacagactgctagatggaaagttacctctaaggaagctctgcaaagaatcagtgaa
tattctgaagctgcaattacaatcagaggaacgtatttcccacctggcaaagaacctaag
gaaggagagcggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcagaaa
gcaaaggcagaaatcaccaggcttataaaagaagaactgattcggctgcaaaattcatac
caaccaacaaataaaggaagatacaaagtcttataa
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