Nyctereutes procyonoides (raccoon dog): 129495394
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Entry
129495394 CDS
T09008
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129495394
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npo03041
]
129495394
Spliceosome [BR:
npo03041
]
Complex A
U1 snRNP components
U1 related factors
129495394
Complex B
129495394
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
129495394
NCBI-ProteinID:
XP_055158821
LinkDB
All DBs
Position
Unknown
AA seq
998 aa
AA seq
DB search
MQATPSEAEAGGQSPQSCVSEAHSDWTAGKPVSLLAPLVSPRSAGQPLTFGPGGRQPLRS
LLVGMCSGSGRRRSSLSPTMRPGTGAERGGLMMGHPGMHYAPMGMHPMGQRANMPPVPHG
MMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQASMQPALPPGVNNMDVAAGTASGAK
SMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQ
TKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTE
IPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASASTSASNTVGGTGPVVPEPEVTSIVA
TVVDNENTVTISTEEQAQLTSTPAVQDQSMEVSSNTGEETAKQETVSDFTPKKEEEESQP
AKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNA
YKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAISERD
RLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTF
AEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDELHE
HGQLHSMSSWMELYPTISSDIRFTNMLGQPVFSLGSTALDLFKFYVEDLKARYHDEKKII
KDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEE
ARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFMHV
LEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRSASEHSSS
AESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQRSESKHKSP
KKKTGKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcgacgccgagcgaggctgaggctgggggccaatcgccgcagagctgcgtgtcg
gaggcgcactctgattggacagcggggaagcccgtcagcctgttggccccgctggtctcg
ccccgcagcgcagggcagcctttaacctttggccccggcgggcgccagccactcagatcg
ctgcttgttggtatgtgcagcggcagtggccgccggcggagcagtctgagcccgacgatg
aggccggggacgggagccgagcgtggaggcctcatgatgggccaccctggcatgcattat
gccccgatgggcatgcaccccatgggccagagagccaacatgcctcctgtacctcacgga
atgatgccgcaaatgatgccccctatgggagggccgccaatgggacaaatgcctggaatg
atgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttccatgcagcct
gccttaccgccaggagtaaataatatggatgtagcagcaggtacagcatctggtgcaaaa
tcaatgtggactgagcataaatcacctgatggaaggacttattactataatactgaaaca
aaacagtccacttgggagaaaccagatgatctgaaaacaccggctgagcaacttttatct
aaatgtccctggaaggaatacaaatctgactctggaaagccttactattataattctcaa
actaaagaatcccgctgggctaaacctaaggaacttgaggatcttgaaggataccagaat
accattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatcaaagccgaa
gaaagcagtaagcaagaagagtgcaccacaacatcaacagccccggttcctacaacagaa
attccgaccaccatgagcaccatggctgctgcggaagccgctgctgctgttgttgctgca
gccgcagctgctgctgctgctgcggctgcagccaatgccagtgcttccacctctgcttca
aatactgttggtggaactggtccagttgttcctgagcctgaggttacttcaattgttgct
actgttgtagataacgagaatacagtgacaatttcaactgaagaacaagcacaacttact
agtactcctgctgttcaggatcagagtatggaagtatccagtaatactggagaagaaacg
gctaagcaagaaactgtatccgattttactccaaaaaaagaagaggaggaaagccaacca
gcaaaaaaaacctatacttggaatacaaaggaggaagcaaagcaagcatttaaagaatta
ttgaaagaaaagcgggtaccttctaatgcttcatgggaacaagctatgaaaatgatcatt
aatgacccaagatacagtgctttagcaaagttgagtgagaaaaagcaggcttttaatgct
tacaaagtccagacagaaaaagaagaaaaagaagaggcaagatcaaaatacaaagaggcc
aaggaatcctttcaacgtttccttgaaaatcatgagaaaatgacttccacaaccagatac
aaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatcagaacgtgat
cgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaaggagcaagca
aagcagttacgaaagagaaattgggaagccttaaaaaatatacttgacaacatggctaat
gtaacatactctactacctggtctgaagcccaacagtatctgatggataatccaactttt
gcagaagatgaggaattacaaaacatggataaagaagatgcattaatttgctttgaagaa
cacatccgagctttagaaaaggaagaagaagaagaaaaacagaaaagtttgctgagagaa
aggagacgacagcggaaaaatagagaatcttttcagatatttttagatgaactgcatgaa
catggacaactgcattctatgtcatcttggatggaattgtacccaacaattagttccgac
attaggtttactaatatgcttggtcagccggttttttcattaggatctactgcacttgac
cttttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaaaataata
aaagacattctaaaggataaaggatttgtagttgaagtaaatactacttttgaagacttt
gtggccataatcagttcaactaaaagatccaccacattagatgctggaaacattaagttg
gctttcaacagtttactagaaaaggcagaagcccgtgaacgcgaacgagaaaaagaggag
gctcggaagatgaaacgaaaagaatctgcatttaagagtatgttgaaacaagctactcct
ccaatagaattggatgctgtctgggaagatatccgggagagatttgtaaaagagccagca
tttgaggacataactctagagtctgaaagaaaacgaatatttaaagattttatgcatgtg
cttgagcatgaatgtcaacatcatcattcaaagaacaagaaacattctaaaaaatctaaa
aaacatcacaggaaacgttcccgctctagatcgggatcagattcagatgatgacgacagc
cattcaaagaaaaaaagacagcgatcagagtctcggtctgcctcagaacattcttctagt
gctgaatctgagagaagttacaagaagtcaaaaaagcataagaagaaaagcaagaagagg
agacataaatctgactctccagagtcagatgctgagcgagagaaggataaaaaagaaaaa
gaccgagaaagtgaaaaagatagaactagacaaagatcagaatcaaaacacaaatcacct
aagaaaaagactggaaaggattctgggaattgggatacttctggcagtgaactgagcgaa
ggggaattggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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