Nyctereutes procyonoides (raccoon dog): 129495597
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Entry
129495597 CDS
T09008
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04140
Autophagy - animal
npo04148
Efferocytosis
npo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129495597 (VPS16)
04148 Efferocytosis
129495597 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129495597 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npo04131
]
129495597 (VPS16)
Membrane trafficking [BR:
npo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129495597 (VPS16)
Hops complex
129495597 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
129495597
NCBI-ProteinID:
XP_055159241
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SIRPVLEIYSASGLPLASLLWKSGPVVSLGWSAEEELLCVQEDGVVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGLAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TTLCQDRVAHILLAVGPDLYLLDHAACSAVTLPGLAPGVSSFLQMAISFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDAPESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPVASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHRPDMQKSLLRAASFGKCFLDKFPPDSFVR
MCQDLRVLNAIRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGHFVDLSLHDTVTTLILGGHSKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcaaactggaacccgctcggggactctgccttttaccggaaatat
gagttgtacagcatggactgggacctgaaggaggaactcagggactgcttggtagctgct
gcaccctatggaggccctattgctctattgaggaacccatggcggaaggagaaggctgcc
agcatacggccagtgcttgagatctactctgcttctggcctgcctctggccagtctgctg
tggaagagtgggcccgtggtgtccctcggctggtcagctgaggaggagctgctctgcgtg
caggaagatggtgtagtactggtttatggacttcatggtgacttccggagacacttcagc
atgggcaatgaggtgctccagaaccgagttctagatgcccggatcttccatactgagttt
ggttcagggttggctatcctcactggggcccaccgcttcaccctcagtgccaacgtggga
gatcttaagcttcgccggatgccagaggtgccaggtctgcagagtgcaccctcatgctgg
accacactgtgccaggaccgagttgcacacattcttctggctgtggggcctgatctctac
ctcctcgaccacgcagcctgctccgcagtgacgctccctggcctggccccaggagtgagc
agcttcctgcagatggctatctccttcacctaccgacacctggcactcttcacagacaca
ggctacatctggatggggacagcatcactcaaggagaagctgtgtgagttcaactgcaac
attcgggcccccccgaagcagatggtctggtgcagccgtcctcgcagcaaagagagggct
gtcgtggtggcgtgggagaggcgtctaatggtggtgggtgatgcacccgagagcatccaa
tttgtgctggatgaagactcctacctggtgcctgagctggatggggtccgcatcttctct
cgtagcacccacgagttcctgcatgaggttccagtggccagcgaggagatcttcaaaatt
gcctcaatggcccccggggcactgttgttggaggcccagaaagagtatgagaaagagagc
cagaaggcagatgagtacctacgggagatccaggagctgggccagctgacccaggccgtg
cagcagtgcattgaggctgcgggacatgagcaccggccagacatgcagaagagtctgctc
agggcggcctcctttggaaagtgtttcctcgacaaatttccacctgacagcttcgtgcgc
atgtgtcaggacctgcgtgtgctcaatgccattcgggactatcacatcggaatccccctc
acttatagccaatataagcagctcaccatccaggtgctgctggacagacttgtgttgcgg
aggctttaccccctggcgattcagatttgcgagtacctgcgccttcctgaagtgcagggt
gtcagcaggatcctggcccactgggcctgctataaggtgcaacagaaagacgtgtctgac
gaggatgttgctcgggccattaaccagaaactgggggacacgccaggcgtctcttactct
gacattgctgcacgggcctatggatgtggccgcacagagctggccatcaagctgctggag
tatgagccacgctctggggagcaggtaccccttctcctaaagatgaagaggagcaaactg
gcactgagcaaggctattgagagtggagacactgatctggtgttcacggtattgctgcac
ctgaagaatgagctcaaccgaggagattttttcatgactcttcggaaccagcccatggcc
ctgagtttgtaccgacaattctgcaaacatcaggagctagagacactgaaggacctttac
aatcaggatgacaaccaccaggagctgggcagcttccacatccgagccagctatgctgca
gaggagcgtattgaggggcgagtcgcagctctgcagacagcagccgatgccttctacaag
gccaagaacgagtttgcagccaaggccacggaggatcaaatgcggctcctgcggctgcag
cggcgcctggaagatgagctggggggccactttgtggacctgtctctgcacgacacagtc
accaccctcatcctgggcggccacagcaagcgtgcagagcagctggcacgtgacttccgc
attccggacaagaggctctggtggctgaagctgaccgccctggcagatctggaagattgg
gaggagctagaaaaattttctaagagcaagaaatcgcccattggctacctgccctttgtc
gagatctgcatgaagcaacacaacaagtatgaggccaagaagtatgcctcccgagtgggt
cccgaacagaaggtcaaggccttgcttcttgttggggatgtggctcaggctgcagatgtg
gccattgagcatcggaacgaagcagagctgagcctcgtattgtcccactgcactggagcc
acagatggggctacagccgataaaattcagcgggctagggcacaagcccagaagaagtga
DBGET
integrated database retrieval system
