Nyctereutes procyonoides (raccoon dog): 129496042
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Entry
129496042 CDS
T09008
Symbol
DICER1
Name
(RefSeq) endoribonuclease Dicer isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
129496042 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npo03036
]
129496042 (DICER1)
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
129496042 (DICER1)
microRNA pathway
RISC loading complex
129496042 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
ResIII
DEAD
Cas3-like_C_2
DSRM_2
Motif
Other DBs
NCBI-GeneID:
129496042
NCBI-ProteinID:
XP_055159928
LinkDB
All DBs
Position
Unknown
AA seq
1923 aa
AA seq
DB search
MKSPALQPLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNT
IVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDLK
VGEYSNLEVNASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHLA
ILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATDL
VVLDRYTSQPCEIVVDCGPFTDRSGLYGRLLVELEEALNFINDCNISVHSKERDSTLISK
QILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCE
EHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDE
DEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFIT
GHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLP
TEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGETD
IEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELPD
GTFYSTLYLPINSPLRASIVGPPMSCVRLAERVVALICCEKLHKIGELDDHLMPVGKETV
KYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTTP
LPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLSL
QMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDI
EKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKF
PSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKR
KAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTASDAGV
GVRSLPVDFRYPNLDFGWKKSIDSKSFISVANSSSAENENYCKHSTIVVPENAARQGANR
TSSLENHDQMSVNCRMLFSESPGKLQIEVATDLTAINGLSYNKNLANGSYDLANRDFCQG
NQLNYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANKSTSDGSPTTA
AMPGTTEAVRALKDKMGSEQSPCPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYVVNQDKSNTDKWEKDEMTKDCMLANGKLDEDFEEDDEEEEDLMWRAPKEDADYE
DDFLEYDQEHIKFIDNMLMGSGAFVKKISLSPFSTTDSAYEWKMPKKSSLGSMPFSSDFE
DFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSI
ADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVMKRTDREKTMCPPRENFSSQQKNLSG
GRAAASVASLRPSVLKDLEYGCLKIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKN
KAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSAL
VNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKE
EDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLE
MEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQV
PNS
NT seq
5772 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagccctgctttgcagcccctcagcatggcaggcctgcagctcatgacccctgcc
tcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgataac
atttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataatacc
atagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaagag
ctgtcctatcagatcaggggagacttcaacagaaatggaaaaaggacggtgttcttggtc
aactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcattcagatctcaag
gttggggaatactcaaacctagaagtaaatgcatcttggacaaaagagaaatggaaccaa
gagtttactaagcaccaggttctcgttatgacttgctatgtcgccttgaatgttttgaaa
aatggttacttatccctgtcagacattaaccttttggtgtttgatgagtgtcatcttgca
atcctagaccacccctaccgagaaattatgaagctctgtgaaaattgtccatcgtgtcct
cgtattttgggactcactgcttccattttaaatgggaaatgcgatcccgaggaattggaa
gaaaagattcagaaactggagaaaattctgaagagtaatgctgaaactgcaactgacctg
gtggtattggacagatacacttctcaaccgtgtgagattgtggtggactgtgggccgttc
acggacagaagtggcctctatggcagactgctggtggagctagaggaagcacttaacttt
atcaacgactgtaacatatctgtgcattcgaaagaaagagattctactctaatttctaaa
cagatactgtcagactgtcgtgcggtattggtagtcctgggcccctggtgtgcagataaa
gtagctgggatgatggtaagagaactgcaaaagtatatcaaacatgaacaggaagagctg
cacaggaaatttctattgtttacagacaccttcctaaggaaaatacatgcactatgtgaa
gagcacttctctcctgcctcacttgacctgaaatttgtaactcctaaagtaataaaactg
cttgaaatcctacgcaaatataaaccgtacgagcgacagcagtttgaaagtgtcgagtgg
tataataataggaatcaggataattatgtgtcttggagtgattctgaggatgatgatgag
gatgaagaaattgaagaaaaagagaagccagagaccaactttccttctccatttaccaat
attttatgtggaatcatttttgtggaaagaagatatacggccgttgtcttaaacagattg
ataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttataact
ggacatggcattggaaagaatcagcctcggaacaaacagatggaagcagaattcagaaaa
caggaagaggtacttaggaaatttcgagcacatgagaccaaccttctcattgcaacaagt
attgtggaagagggtgttgatataccaaaatgcaacttggtggttcgatttgatttgccc
acagagtatcgatcctatgttcaatctaagggaagagcaagggcaccgatctctaattat
ataatgttagcagatacagacaaaataaaaagttttgaagaagaccttaaaacatacaaa
gctattgaaaagatcttaagaaacaagtgttccaagtcagttgacactggtgagactgac
attgaacctgttgtggatgatgatgacgtgttcccaccatatgtgttgaggcctgatgat
ggtggtccacgagtcacaatcaacacggccattggacacatcaatagatactgtgctaga
ttaccaagtgatccgtttactcatctagctcctaaatgtagaacccgagagttgcctgat
ggtacattttattcaactctttatctgccaattaactcacctctccgagcctccattgtt
ggtccaccaatgagctgtgtacgattggcggaaagagtcgtagctctcatttgctgtgaa
aaactgcacaaaattggtgaactggatgaccatttgatgccagttgggaaagagaccgtt
aaatatgaagaagagcttgatttacatgatgaagaagagaccagtgttccaggaagacca
ggttccacaaaacgaagacagtgctacccaaaagcaattccagaatgtttaagggatagc
tatcccaaacctgatcagccctgttacctgtatgtgataggaatggttctgacgacgccc
ttacctgatgaactcaacttcagaaggcgcaagctctatccccctgaggataccacacga
tgctttggaatactaacagccaaacctatacctcagatcccgcactttcctgtgtacacg
cgctctggagaggttaccatatccattgagttgaagaagtctggtttcacattgtctcta
caaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcggctt
gaaaaacctgcactagaatttaaacccacagacgctgattcagcatactgtgttctacct
cttaatgttgtgaatgactccagcactttggacattgactttaaattcatggaagatatt
gagaaatctgaagctcgcataggcattcccagtaccaagtattcaaaagaaacacctttt
gtttttaaattagaagattaccaggatgcagttatcattccaagataccgtaattttgat
cagcctcatcgattctatgtagctgatgtgtacactgatcttaccccactgagtaaattt
ccttcccctgagtatgaaacttttgcagaatattataaaacaaaatacaaccttgacctg
accaatctcaaccagccactgctggatgtggaccacacatcttcaagacttaatcttttg
acacctcgtcatttgaatcagaaggggaaagcgcttcctcttagcagtgctgaaaagaga
aaagccaagtgggaaagtctgcagaataaacagatactggttccagagctctgtgctata
cacccaattccagcgtcactgtggagaaaagcagtctgtctccctagtatactctatcgc
cttcactgccttttgaccgcagaggagctaagagcccagacggccagcgatgctggcgtg
ggagtccgatcacttcccgtggattttagataccctaacctagactttgggtggaaaaaa
tctattgacagcaaatctttcatctcagttgctaactcctcttcagctgaaaatgaaaat
tactgtaagcacagcacaattgtcgtccctgaaaatgctgcacgtcaaggtgctaataga
acctcctctctagaaaatcatgaccaaatgtctgtgaactgcagaatgttattcagtgag
tcacctggtaagctccagattgaagttgcaacagatcttacagcaattaatggtctttct
tataataaaaatcttgccaatggcagttatgatttagctaacagagacttttgccaagga
aatcagctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccatt
cagaatttatacaattacgagaaccagcccaagcccagcgatgaatgtactctactgagt
aataaataccttgatggaaatgctaacaaatctacctcagatggaagtcccacgacggcc
gcaatgcctggtactaccgaagctgttcgagcgctcaaggacaagatgggttctgagcag
agcccttgtcctgggtactcctcgaggactcttggcccaaatcctggacttattctgcag
gctttgaccctttcaaatgctagtgatggatttaacctggagcggcttgaaatgctcggt
gactcctttttaaagcatgccatcaccacatatctattttgcacttatcctgatgctcat
gagggccgcctttcatatatgagaagcaaaaaggtcagcaactgtaatctgtatcggctt
ggaaaaaagaagggactgcccagccgcatggtggtatcaatatttgatccccctgtgaat
tggcttcctcctggttatgtagtaaaccaagacaaaagtaacacagataaatgggaaaaa
gatgaaatgacaaaagactgcatgttggctaatggcaagctggacgaggactttgaggag
gacgacgaggaggaggaggatctaatgtggagggctccgaaggaggacgccgattatgaa
gatgatttcctggagtatgatcaggaacatatcaaatttatagataacatgttaatggga
tcaggagcttttgtaaagaaaatttctctctctcctttttcaaccactgattctgcatac
gaatggaaaatgcccaaaaaatcctccttaggtagtatgccattttcgtcagattttgag
gattttgactatagctcttgggatgccatgtgctatctggatcctagcaaagctgtggaa
gaggatgactttgtggtggggttctggaatccatcagaagaaaactgtggtgttgacacg
gggaaacagtccatttcttacgacttgcacactgagcagtgtattgcggacaaaagcata
gccgactgtgtggaagccctgctgggctgctatttaaccagctgcggcgagagggctgct
cagctcttcctctgctcactggggctcaaggtgctcccggtcatgaaaaggactgatcgg
gaaaagaccatgtgccctcctagggagaatttcagcagccaacaaaagaacctttcaggg
ggccgcgctgctgcctctgtggccagtttacgtccctctgtgttgaaagacttggagtat
ggctgtttgaagattccaccgaggtgtatgtttgatcatccggacgcagataaaacactg
aatcaccttatatcgggttttgagaattttgaaaagaaaatcaactacagattcaagaat
aaggcttatcttctacaggcttttacccatgcctcctaccactacaatactattactgat
tgttaccagcgcctggagttcctgggagatgcgatcttggactacctcataaccaagcac
ctttacgaagacccacggcagcactccccgggcgtcctgaccgacctgcggtccgcactg
gtcaacaacaccatcttcgcgtcgctggcggtcaagtacgactaccacaagtacttcaaa
gccgtctcccccgagctcttccatgtcatcgacgacttcgtgcagttccagctggagaag
aatgagatgcagggcatggactccgagcttaggaggtctgaggaggacgaagagaaagaa
gaggacattgaagttccaaaggccatgggggacatttttgagtcgcttgctggtgccatt
tacatggatagtgggatgtcactggagatggtttggcaggtgtactatcctatgatgcgg
ccgctgatagaaaaattttctgcaaacgtgccccgttcccctgtgcgagaattgcttgaa
atggaaccagaaactgccaaatttagcccggctgagaggacatatgacggcaaggtcaga
gtcacggtggaagtggtagggaaggggaaatttaaaggcgtcggccggagctacaggatc
gccaagtctgcagcagcaagaagagccctacgcagcctcaaagccaatcaacctcaggtt
cccaacagctga
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integrated database retrieval system
