Nyctereutes procyonoides (raccoon dog): 129496214
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Entry
129496214 CDS
T09008
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4
KO
K15615
homeobox protein SIX4
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
129496214 (SIX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
npo03000
]
129496214 (SIX4)
Transcription factors [BR:
npo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
129496214 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
HTH_TSHZ3
Motif
Other DBs
NCBI-GeneID:
129496214
NCBI-ProteinID:
XP_055160254
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MSSSSPTGQIASAADIKQENGMESASEGQEAPQEVAGGAAAGLSPPAPAPFPLEPGDAAA
AAAAAAAARVSAEEGAAAAANQVQLHSELLGRHHHAAAAAAAAAAAAAAAAAQTPLAFSP
DHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILE
SHSFESANHPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCF
KEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSES
DGNPSTEDESSKGHEDLSPHPLSGSSDSVTNLSLPSHMEPVYMQQIGNAKISLSSSGVLL
NGSLVPASTSPVFLNGNSFIQGPNGVILNGLNVGNTQAVSLNPPKMASNIVSNGISMSDI
LGSTSQDVKEFKVLQSSSANSAATTSYSPSAPVSFPGLIPSTEVKREGIQTVASQDGGSV
VTFTTPVQINQYGIVQIPNSGTNSQFLNGSIGFSPLQLPSVSVAASQGNLSVNASTSDGS
TFTSESTTVQQGKVFLSSLAPSAVVYTVPNSGQTMGSVKQEGLERSLVFSQLMPVNQNAQ
INANLSSENISGSGLHPLASLVNVSPTHNFPLTPPTLLNPTELNPDLADSQPMSAPVASK
STVTSVSSTNYATLQNCSLITGQDLLSVPMTQTSLGEIVPTAEDQVGHPSPAVHQDFVRE
HRLVLQSVANIKENFLNSEGKATSNLMMLDSKSKYVLEGMVETVCEDLETDKKDLAKLQT
VQLDEDMQDL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagatcgcaagtgcggcggacatcaagcaggagaat
gggatggagagcgcctcggaagggcaggaggcgccccaagaagtggcggggggcgcggcg
gcggggctgagccccccggctccagcccctttccccctggagccgggggacgccgcggcc
gccgccgccgccgccgccgccgccagggtgagcgcggaggaaggggcagcggcggcggcg
aatcaggtacaactccactcggaacttctgggcaggcaccaccacgccgcggccgccgca
gccgcagccgccgccgccgccgccgccgccgccgcgcagaccccgctggccttctcgccc
gaccacgtcgcctgcgtgtgcgaggcgctgcagcaggggggcaacctggaccgcctggcc
cggttcctgtggtccctgccccagagcgacctgctacgtggcaacgagagcctgctgaag
gcgcgggcgctggtggccttccaccagggcatctaccccgagctctacagcatcctcgag
agccacagcttcgagtcggccaaccacccgctgctgcagcagctctggtacaaggcgcgc
tacaccgaggccgagcgagcccgcggccggcccctgggcgccgtggacaagtaccggctg
cgcaggaaattcccgctgccccgcaccatctgggacggcgaggagacggtgtattgtttc
aaggagaagtcgcgcaacgcgctcaaggagctctacaagcagaatcgctacccttcgccc
gccgagaagcggcacctggccaagatcaccggcctctccctcacccaggtcagcaactgg
ttcaagaaccgccggcagcgcgatcggaacccctcggagacccagtccaaaagtgagtca
gatggcaatcccagcactgaagatgaatccagcaagggccatgaggacttgtctcctcat
ccactctccggttcatcggatagtgtcaccaacctcagccttcccagtcacatggagcca
gtatacatgcaacaaattggaaatgctaagatctcattaagctcttctggagttttgttg
aacggaagcttggtgcctgcaagtacttcacctgtctttcttaatggtaattctttcatt
cagggacccaatggagtcatccttaatggattaaatgtgggaaatacacaggcagtgtca
ctgaacccaccaaaaatggcgtcaaacattgtgagcaatggtatatccatgagtgacata
ctggggtctacctcccaggatgtgaaggaattcaaagtcctccagagttcttcagctaac
tcagcagccaccacttcctacagccccagtgcccctgtgtcattcccagggctgataccc
agcactgaggtaaaaagagaaggcattcaaacggtggcttcccaggatggaggctctgtg
gtgacttttactacaccagtgcaaattaaccagtatggcattgtccagattcccaattcc
gggacaaacagccagttccttaatgggagcattggattctctccactgcagctgccttct
gtttcggtagcagcttcacaaggtaatctttcagtaaacgcaagcacttcagatgggagc
acatttacaagtgagtccaccacagtccagcaaggaaaggttttcttgagttctcttgct
cccagtgctgtggtatacactgttccaaattcaggccagactatgggatctgttaaacag
gagggcttggagaggagcctggtattttctcagttgatgcctgtcaatcagaatgcacaa
ataaatgcaaacctgtcttctgaaaatatctcggggagcggcctccatccactggcctca
ttagttaacgtatccccaactcacaattttcccctgactccccccaccttattaaatccc
accgagctaaatcccgaccttgctgatagccagccaatgtctgcacctgtggcaagcaaa
tctactgtgacatctgtcagcagcactaactatgcaactcttcagaactgttcccttatt
accggtcaagatctcttgtccgtccccatgacccagacctcccttggggaaattgttcct
acggccgaagaccaggtgggtcacccttccccggcagtgcaccaggattttgtcagagaa
catcgtttggttctgcaatcagtagctaatataaaagagaatttcttaaattctgagggc
aaagccacgagcaacttaatgatgctggactcaaaatccaagtacgtcctagagggcatg
gtcgagactgtctgtgaagacctggaaacagacaaaaaagaccttgccaagctccaaact
gtccaattggatgaagatatgcaagacttataa
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