Nyctereutes procyonoides (raccoon dog): 129497348
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Entry
129497348 CDS
T09008
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03250
Viral life cycle - HIV-1
npo04623
Cytosolic DNA-sensing pathway
npo05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
129497348 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
129497348 (SAMHD1)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
129497348 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npo03400
]
129497348 (SAMHD1)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129497348 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
SAM_1
HD
HD_assoc_2
SAM_Ste50p
PDEase_I
MipZ
Motif
Other DBs
NCBI-GeneID:
129497348
NCBI-ProteinID:
XP_055162155
LinkDB
All DBs
Position
Unknown
AA seq
627 aa
AA seq
DB search
MQGADSDQPFKRPRCDGSPRTPPNTRSAAAGRSSGPELRPDHQSWGPEQVCCFLKRSGFA
DPRLLERFRENKITGLTLLHLNEADLERLGISTLGDRKKLQACIQQLSEIHVDAMKVIND
PIHGHIELHPLLIRIIDTPQFQRLRYIKQLGGSYYIFPGASHNRFEHSLGVGYLAGCLVR
ALREKQPELQISGRDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPNVKWTHEQGSVMM
FEHLVNSNGLKAVMEQYGLIPEEDICFIKEQITGPLETPIKDSLWPYKGRPKEKSFLYEI
VANKRNGIDVDKWDYFARDCHHLGIQNNFDYQRFLKFARVCEVDNRKRICTRDKEVGNLY
DMFHTRNTLHRRAYQHKVGNIIDTMITDAFLKADPYIEITGAEGKKYHISTAIDDMEAFT
KLTDNIFLEILYSSDPNLNEAREILKKIEYRDLYKYVGETKPKGKIRIERENYKSLPEEI
ARAKPSDIPLEAELKAEDLIVDVINMDYGMEDKNPIDHVRFYCKSDLSKAVMITKDQVSE
FLPERFAEQLIRVYCKKTDANTLFAVKQHFVHWCLIRDFTKPQDGDVVAPLITPRKAEWN
NVDSAQSPDHFRERSKFKLRLFQDDSM
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagggagctgactcggaccagcccttcaagcggccccgatgcgatggcagtccaaga
accccgccaaacacccgttccgcggcggcggggcggtcctcgggccccgaactccgcccc
gaccaccagagctggggcccggagcaggtgtgctgcttcctaaagcgcagcggcttcgct
gatccccgactactggaacgcttccgagaaaataaaatcacaggtctaacattgctccac
cttaatgaggctgatcttgaaagacttggaataagtaccttgggtgacagaaagaagctc
caagcttgtatccaacaactgagtgaaattcatgttgatgcaatgaaggtaattaatgat
cctatccatggccacattgaactccaccctctcctcatccgaatcatcgacacacctcaa
tttcagcggcttcgatatatcaaacagttgggaggcagttactacatttttccaggtgct
tcgcacaatcgatttgagcacagtctaggtgtagggtatctagcaggatgtctggttcgt
gcactgcgtgagaagcaaccagagctgcagataagtggacgagatgtgctctgtgttcag
attgctggcctttgtcatgatctcggtcatgggccattttctcatatgtttgatggaaga
tttattccacttgctcgcccaaatgtgaaatggacgcatgaacagggctcagtgatgatg
tttgagcacctggttaattctaatggactaaaagcggtcatggaacagtatggtcttatc
cctgaggaagatatttgctttatcaaggaacaaattacaggaccacttgaaacaccaatc
aaagattctttgtggccttataaaggacgtcccaaagagaaaagcttcctttatgagata
gtggccaataaaagaaatggcattgatgtggacaaatgggattattttgccagggactgc
catcatcttggaatacaaaataattttgattaccagcgctttcttaaatttgctcgtgtc
tgtgaagtagataataggaaacgtatttgcactagagataaggaggttgggaatctgtat
gacatgttccatactcgtaacactttgcaccgcagagcttatcaacacaaagttggcaac
atcattgatacaatgattacagatgctttcctcaaagcagacccctacatagagattaca
ggggctgaaggaaagaagtatcacatttctacagcaattgatgacatggaagccttcact
aagctaacagataacatttttctggagattttatattcttctgatcctaacctgaatgaa
gcacgagagattttaaaaaaaatcgaataccgtgatctatacaagtatgtgggtgagact
aagccaaagggaaaaataagaattgaaagggaaaactataaaagccttccagaggaaatt
gccagggctaaacctagtgacataccactagaagctgaactgaaggctgaagatttaata
gtggatgttatcaacatggattatggaatggaagacaagaatccaattgatcatgttcgc
ttctattgtaagagtgacctcagcaaagcagtcatgattactaaagatcaggtttcagaa
tttttgccagagagatttgcagagcagctaattcgtgtatactgtaagaagactgatgca
aacacattgtttgctgtgaaacaacatttcgttcattggtgcttaatcagagacttcacc
aagccgcaggatggtgatgtggtggccccacttataacacctcgaaaagcggagtggaat
aacgtggattcagcccagagcccagatcacttccgagaaaggtccaaatttaaactccgg
ctttttcaggatgactcaatgtga
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