Nyctereutes procyonoides (raccoon dog): 129498193
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Entry
129498193 CDS
T09008
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npo04131
]
129498193 (VPS50)
Membrane trafficking [BR:
npo04131
]
Protein recycling
Others
EARP complex
129498193 (VPS50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
129498193
NCBI-ProteinID:
XP_055163421
LinkDB
All DBs
Position
Unknown
AA seq
963 aa
AA seq
DB search
MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCSGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNIGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISR
LMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSIL
QLHEFKFMEQSRSPSVSPSKQPASTSSKTVTLFEQYCSDGNPFEIQANHKDEETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDMEVSADPTATLTAAEERKEKVPSPHLSHLVVLTSGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDALLKEFEQFNRRLNEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDIDR
PKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccgacagggtctgaaaagccctccagagagcctt
agtgatcttggtgccattgagagtctccgggtccctggaaaggaggaattccgagaactt
cgagaacagcctagtgaccctcaagctgaacaagaactaattaatagtattgaacaagta
tatttttctacggactcatttgatattgttaaatatgagctggagaaactccctcccgtc
ctcaacttgcaagaattagaggagtacagagacaaattgaaacaacagcaagctgcagtc
tctaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtaaaggaacttgaa
agagttacctcattgcagacaggtcttcagttagctgctgttatctgcacaaatgggagg
agacacttgaatattgccaaggaaggtttcactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgctgattggacttctgaaatctctgagaactataaaaacattg
caaagaaccgatgtgcgcttaagtgaaatgcttgaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagccgctagcacttttaaacattatagttgcataagt
gaattgaattcaaagcttcaagatactttagaacaaattgaggaacagttggatgtagct
ctttccaaaatctgtaagaattttgacattaaccattacactaaggttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggatcaacttcacatgcactttactcaagcc
attcataatactgtatttcaagttgttcttggttatgtggagctatgttcaggaaacaca
gatacaaaattccaaaagctgcagtataaggatctctgtacacatgttacaccagacagc
tatattccatgtcttgctgacctatgcaaagcattgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgacaatgaggatactacttctgcttctgaaggg
agtaatattggtactgaagaaactaattttgatcgtggctacataaaaaagaaattagaa
catggacttacacgaatatggcaggatgtccagctaaaagtaaaaacctacttgcttgga
acagatttgtctatatttaaatatgatgatttcatctttgttttggatataatcagcagg
ttgatgcaagttggagaagaattttgtggtagcaaatctgaagttttgcaagaatccatt
agaaaacaaagtgtcaattattttaagaactaccatagaacacggcttgatgaactgaga
atgtttctagagaatgagacctgggagctttgtcctgttaagtcaaatttcagcatcctg
caacttcatgaatttaaattcatggaacagtctcgttccccatcagtttcacccagtaaa
cagccagcttcaacttcctcaaaaacagtgaccttgtttgagcagtactgtagtgatggg
aatccctttgaaatccaggccaaccacaaagatgaagaaacagaagatgtcctggcttct
aatgggtatgaatctgatgagcaagaaaaaagtgcctatcaggagtatgacagcgacagt
gatgttcctgaggaactgaaacgagattatgtggatgagcaaacgggtgatgcacctgtg
aaaagcgtttctagagaaactctaaaaagcaggaagaaatcagattatagtctaaataaa
gtgaatgcacccatcttaaccaatacaacattgaatgtaataagacttgttggtaaatat
atgcagatgatgaacattcttaagccaattgcctttgatgttatccatttcatgtctcag
ctatttgattattacttgtatgcaatatataccttttttggtcggaatgattcactggaa
tccacaggactaggccttagtagtagtagattaagaacaactcttaacagaatacaagaa
agccttattgatatggaagtttcagctgatcctaccgccacccttaccgcagcagaagag
agaaaagagaaggtaccaagcccacacctcagtcacctagtggttttgacatctggggat
acgttatatgggctggcagaaagagtggtagccacagaatccttggtattcttggctgaa
cagtttgagttccttcagcctcatctggatgctgtgatgcctgcagtcaaaaagcccttt
ctccagcagttttattctcagacagtttcaactgccagtgaactacgcaaaccaatttat
tggatcgtagccggtaaagctattgattatgaacagatgctgctcctaatggctaatgtg
aagtgggatgtaaaagaaattatgtcacagcacaacatctatgtagatgcactgctaaag
gaatttgagcaatttaacaggaggttaaatgaggtttctaagagagttcggatacctctg
cccgtgtctaatatactttgggaacactgtatacggctggccaacagaactattgtggaa
ggatatgccaacgtcaagaagtgtagtaatgagggtcgtgccctgatgcaattggatttt
caacagtttttaatgaaacttgaaaaactaacagatattagacccattcctgataaagaa
tttgtggagacatatattaaagcctactacctaactgagaatgacatggaacgctggatc
aaagagcacagggaatattcaacgaagcagctgaccaatctggtaaatgtttgcctggga
tctcatatcaataagaaagcaagacaaaaactcctcgctgctatagatgatatagacaga
cccaaaagataa
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