KEGG   Nyctereutes procyonoides (raccoon dog): 129499055
Entry
129499055         CDS       T09008                                 
Symbol
DDB2
Name
(RefSeq) DNA damage-binding protein 2 isoform X1
  KO
K10140  DNA damage-binding protein 2
Organism
npo  Nyctereutes procyonoides (raccoon dog)
Pathway
npo03420  Nucleotide excision repair
npo04115  p53 signaling pathway
npo04120  Ubiquitin mediated proteolysis
npo05161  Hepatitis B
npo05169  Epstein-Barr virus infection
npo05200  Pathways in cancer
npo05202  Transcriptional misregulation in cancer
npo05210  Colorectal cancer
npo05212  Pancreatic cancer
npo05213  Endometrial cancer
npo05214  Glioma
npo05216  Thyroid cancer
npo05217  Basal cell carcinoma
npo05218  Melanoma
npo05220  Chronic myeloid leukemia
npo05222  Small cell lung cancer
npo05223  Non-small cell lung cancer
npo05224  Breast cancer
npo05225  Hepatocellular carcinoma
npo05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:npo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    129499055 (DDB2)
  09124 Replication and repair
   03420 Nucleotide excision repair
    129499055 (DDB2)
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    129499055 (DDB2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    129499055 (DDB2)
   05202 Transcriptional misregulation in cancer
    129499055 (DDB2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    129499055 (DDB2)
   05212 Pancreatic cancer
    129499055 (DDB2)
   05225 Hepatocellular carcinoma
    129499055 (DDB2)
   05226 Gastric cancer
    129499055 (DDB2)
   05214 Glioma
    129499055 (DDB2)
   05216 Thyroid cancer
    129499055 (DDB2)
   05220 Chronic myeloid leukemia
    129499055 (DDB2)
   05217 Basal cell carcinoma
    129499055 (DDB2)
   05218 Melanoma
    129499055 (DDB2)
   05213 Endometrial cancer
    129499055 (DDB2)
   05224 Breast cancer
    129499055 (DDB2)
   05222 Small cell lung cancer
    129499055 (DDB2)
   05223 Non-small cell lung cancer
    129499055 (DDB2)
  09172 Infectious disease: viral
   05161 Hepatitis B
    129499055 (DDB2)
   05169 Epstein-Barr virus infection
    129499055 (DDB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:npo04121]
    129499055 (DDB2)
   03400 DNA repair and recombination proteins [BR:npo03400]
    129499055 (DDB2)
Ubiquitin system [BR:npo04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     129499055 (DDB2)
DNA repair and recombination proteins [BR:npo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129499055 (DDB2)
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_RIG_2nd WDR55 Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st EIF3I Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD_LRWD1 NBCH_WD40 EF-hand_1
Other DBs
NCBI-GeneID: 129499055
NCBI-ProteinID: XP_055164631
LinkDB
Position
Unknown
AA seq 456 aa
MAPRKRPETQKTPEVAVRPKSKRSRSPRELEPEAKKLCVKGPGSSRRFDSGCLWAGLASL
QVPPSCSSIVRALHHHKLGKAAWPSLQQGLQQSFLHSLASYRIFQKAAPFDRRATSLAWH
PTHPSTLAVGSKGGDIMLWNFGMKDKPTFIKGIGAGGSITGLKFNPLDTNQFFTSSMEGT
TRLQDFKGNTLRVFTSSGTCNFWFCSLDVSARSRMVVTGDNVGHVILLNMDGREVRFLEP
SSPLSVPCPWPPCAPPEPSPSLQLWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWD
LRQVRGKSSFLHSLPHSHPVNAACFSPDGAQLLTTDQKSELRVYSASQWDYPPSLIPHPH
RHFQHLTPIKATWHPRYNLIVVGRYPDPNFKSCTPHELRTIDVFDGSSGKMMYQLYDPES
SGIISLNEFNPMGDTLASVMGYHILIWSQEEARMRP
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggctcccaggaaacgcccagaaacccagaagacccccgaggtggctgtgcgccccaag
agcaagaggagcagaagcccccgggagctggagcccgaggccaagaagctctgtgtgaag
ggccccggttctagcagaagatttgactcaggctgcctttgggcggggttggctagcctg
caggtcccgccatcgtgcagcagcatcgtcagggcgctccaccaccataagctgggcaaa
gctgcctggccgtcactgcagcagggtctccagcagtcctttttgcattctctggcttct
taccggatattccaaaaggctgccccttttgacaggagggccacatccttggcatggcat
ccaactcaccccagcaccctggctgtgggttccaaagggggagatatcatgctctggaac
tttggcatgaaggacaaacctaccttcattaaagggattggagctggagggagcatcact
gggctgaagtttaaccctcttgataccaaccagtttttcacctcctcaatggagggaaca
actaggctgcaagactttaaaggcaacactctgcgagtttttaccagctcaggcacctgc
aacttctggttttgcagcctggatgtgtctgccagaagccgaatggtggtcacaggagac
aatgtggggcacgtgatcctactcaacatggatggcagggaggtgcgttttctggagccc
agttcccccctttctgtcccttgcccctggcctccctgcgccccacctgaaccgagccct
tctctgcagctctggaatctgagaatgcacaaaaagaaagtgacccacgtggccctgaac
ccatgctgtgattggttcctggccacagcctccgtagaccaaacagtgaaaatctgggac
ctgcgccaggttagagggaaatccagcttcctccactcgctgccgcatagccatcctgtc
aatgcagcctgtttcagtcctgatggagcccagctcttgaccactgaccagaagagtgag
ctccgggtttactcagcctcccagtgggactatcccccaagcctgatcccacatcctcac
cgccacttccagcacctgacacccatcaaggcaacctggcatcctcggtacaacctcatt
gtcgtgggccgatacccagaccccaatttcaaaagctgtacccctcatgaattaaggacg
atcgatgtgtttgacggaagctcagggaagatgatgtatcagctctatgacccagaatct
tctggtatcatttcgctcaatgagttcaatcctatgggggacacgctggcctctgtgatg
ggttatcacattctcatttggagccaggaggaagccaggatgcggccatga

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