Nyctereutes procyonoides (raccoon dog): 129499749
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Entry
129499749 CDS
T09008
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03013
Nucleocytoplasmic transport
npo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129499749
09122 Translation
03013 Nucleocytoplasmic transport
129499749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129499749
03041 Spliceosome [BR:
npo03041
]
129499749
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
129499749
Spliceosome [BR:
npo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
129499749
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_NOL10_N
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_EML_2
TRM82_WD
NBCH_WD40
Beta-prop_EIPR1
Beta-prop_IP5PC_F
Beta-prop_WDR75_1st
DSE1_N
Beta-prop_WDR36-Utp21_1st
WDR54
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
ASA1
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_LRRK2
CFAP251_N
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
129499749
NCBI-ProteinID:
XP_055165588
LinkDB
All DBs
Position
Unknown
AA seq
444 aa
AA seq
DB search
MKVSENYEGVFGVNAPGTTSGLYTASVVNDSLRPYMLGTDGMGSNSASATDHLSEFRHLN
LCVSASYVKASQRDEDKERWEGFLAHPLPTAAPSGAGLGGRPVLPPADRWSLGQMTERVT
KRQHEKRANNLFWRQSVITTPPRCGQRAYVKPVCVAFVVPRKKRRQKAYSKPVVTFQAHD
GPVYSMVSTDRHQLSAGDGEVKAWLWAEILKKGCNELWRRQPPNRTNLEVPEINALLLVP
KENSLILVGGDCQLHMMDLETGTFTRALQGHTDYVHCLALRERSPEVLSGGEDGAVQLWD
LRTAKEVQTIQVYKHEEWSRPHNGRWIGCLATDSDWMVCGGGPALTLWHLRSSTPMTIFP
KRTPQKHVTFCQGLILSAGQGLCVNQWQLSGELKAQVPGSSPGLLSLSLNQQPAAPECKV
LTDAGNSCRVDVFTXGYCAFSLSF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttctgaaaattacgaaggtgtatttggtgtaaatgctccaggaaccacatct
ggactgtacacggcatccgtagttaatgacagtttaagaccttatatgttgggaacagat
ggcatgggttcaaattccgcttctgccactgaccacttgtctgaattcaggcaccttaat
ctctgtgtctccgcctcctatgtaaaagcttcacagagggacgaagacaaagaaagatgg
gagggcttcctggctcatcccctccccactgcagctccgagcggggctgggctcgggggt
cggccggtattgccacctgctgaccggtggtcgctaggccagatgacagagcgggtgacc
aagcgccagcatgagaagcgagctaacaatctcttttggagacagtctgtaataacgaca
cctccgcgatgtggacaacgagcatatgtcaagcccgtctgtgttgccttcgtggtccct
cggaaaaaacgacgacaaaaagcgtatagtaagccagtggtgacattccaagcccatgat
gggccggtctacagcatggtctccacggatcgacatcagctcagtgctggggacggggaa
gtgaaggcctggctttgggcagagatcctcaagaagggttgtaatgagctgtggcggcgt
cagcccccaaacaggaccaacctagaagtgcctgagatcaatgctttgcttctcgtcccc
aaggagaattctctcattctggtagggggagactgtcagttgcatatgatggaccttgag
accgggaccttcacacgggccctccagggccacacagactatgtccactgcctggcactg
cgggagcggagtcctgaggtgctgtcaggtggagaggatggagccgtgcaactttgggac
ctccgcacagccaaggaagtccagaccatccaggtatataagcatgaggagtggtcaagg
ccacacaatgggcgttggattggctgtttggccactgactcagactggatggtctgtgga
ggaggcccagcactcaccctctggcacctccgatcctccacacccatgactattttcccc
aaaaggacgccacagaaacatgtcaccttctgccagggcctgattctgtcagctggccag
ggcctctgtgtcaaccagtggcagctgagtggggagctcaaggcgcaggtgcctggctcc
tccccagggctgcttagcctcagtctcaaccagcagccagcagcacccgagtgcaaggtc
ctgacagacgcaggtaacagctgccgcgtggatgtcttcacgnnaggctactgcgccttc
tccctgtccttctga
DBGET
integrated database retrieval system
