Nyctereutes procyonoides (raccoon dog): 129499791
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Entry
129499791 CDS
T09008
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npo04131
]
129499791 (VPS13A)
Membrane trafficking [BR:
npo04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129499791 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
129499791
NCBI-ProteinID:
XP_055165637
LinkDB
All DBs
Position
Unknown
AA seq
3171 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLIIPWKNLYTQPVEAVLGDIYLLIVPSSKIKYDPLKEEKQLLEAKQHELKRIEE
AKQKVADQEKHQVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQNWVPCLHDETEKLVRKLVRLDNLFAYWNVKSRLFYLNDYDESLDSLKNGIV
TDNTVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKINLDVELHDIAVEFNKPQYFSVME
LLESVDMMTQNLPYRKFKPDVPLHCHAREWWSYAIHGILEVNICPRLRMWSWKHIREHRQ
KMKKYKDLYKKKITTKKPAGEILIALEELEKTLDVFNITISRQQAEVEAKKAGYRIFREG
AEDSEENKGWFSWLWTWSEPKSKEQPDVKPGILEEMLTPEEKTLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIVLREKQETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPRLLSSLDDATSLFQIIFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTATGLLYIIETQKVLDLRINLKASYVIIPQD
GIFSPTSNLLLLDLGHLKVTSKSRLELPDMKQGGARLEEIMHRAYDSFDVQLTSIQLLYS
TVGDNWREARKLNVSTQHILVPMHFNVELSKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPTPEAYAPAKPFQIQRSTSLGTSQISQKMLPFLELPCVEDDSEEE
YFDAPCSPLEEPLQSPTGVQSCQQKKIQKPDCSKNMIQYKIRFEVPEVLIQFYHLVGDCE
LPVVEIDVLGLGTDVELRTFDLKANAFLKEFCLKCPEYFDENKKPIYLVTTLDNTMEDLL
TLEYVKAEKNLPNLKSTYNNAVQLIKVNFSSLDIHLHTEALLNTINYFNNILPQLEEKSA
PVSVAETEDKGEVIKKMPLKLSKNEDIINLQILAELSCLQIFIQDQKRNISEIKIEGLDS
EIIMRPAATEINAKLRNIIVLDSDKTAVYKKAVYITGKEVFSFKMISFVDATAGSAYTDM
NVVDVQVNLTVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQ
RSSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHIITESQSNPPPVIDLITI
RLSEMRLYRTQFINDTYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNINAQLKPMEFI
LSQEDLTTIFKTLYGNIWYEEGDGASPGGVKDQSSVNSGVTNASHHLEGTTVVTAAVVEV
HSQASQVKTTLNMSFRTDYLTMVLYSPGLEKTSFTDVRDPSLKLAEFKLENIISTAKMYT
DDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRRVRDGWVADLVLQ
ETYICASVEFLLTVANVFLEAYTTGTAVETSVQTWTAKEEVPVQESVKWEMNIIIKNPEI
VFVADMTRSDAPALVITTQCEICWKGDLENNTMTAAIKDLQVRACPFLPVKRKGKITTVL
QPCDLFYQATQVRTDPQVMDISVKSLTLKVSPVIINTVITITSALYTSKDTIPQETTSTA
HLWEKKDTKNLKMWFLEEPNEVENKAPTTELILKGEIIRMNIDSIFIVLEAGIGHRTVPM
LLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGI
KMKKKTKKAIVESDTEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAFTEAA
TGTSTAFIRDLAPFMILNSLGLTVSVSPSDSFSVLNLPLAKSYVLKNEESLSMDYVGTKD
NDHFNAMTSLSSKLFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQVDGV
EGSKKVTIRSPVQIKNHFSVPLSVYEGDILLGTASPGNEFNIPLTSYRSPLSLRPEDEDY
QACERIDFEEIIKNDGTFLKKKCRSINAAKKPFIINVVPEKDNLASLSVYSEDGWDLPYI
MHLWPPILLRNLLPYKIAYYIEGTEHKVYTLNEGHSAHICTVQLDKAILHLKLLDYLNHD
WKSEYHIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNTGQTVVAFHSPYWMVNKTGRM
LQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAVK
CKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIENKSKYHISVTEQGNDKWLSLDLEQCI
PFWPEDASNALLIQVERHQGPPKKIHFNKQENCILLRLDNELGGIIAEVNLAEHSTVITF
SDYHDGAATFLLINHTKSDIVQYNQSSLSEIEDSLPPGKAVFYTWADPMGSRKLKWRCGK
SHGEVTQKDDMMTPINSGKKTIYLVSFFEGLQRIILFTEDPRVFKATYESEKAELAEQEI
VLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFKEY
TESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSFR
IQIYRIQIQNQIQGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYF
KVLIQEMDLRLDLGFVYALAELMTEAEVSEKNEVELFHKDIEAFQEEYKTASLVDSSQVS
LYEYFHISPIKLHLSVSLSSGREEAKDSEKHEGLVAVHSLNLLLKSIGATLTDVQDVVFK
LAFFELNYQFHTASELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAFF
YEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITNAMAKGVAAMTMDEDYQQK
RREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVG
AVARPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQ
VMENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIV
HGRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPRF
NT seq
9516 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaatgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttataattccatggaaaaacctgtatactcaaccagttgaa
gctgttctgggagacatctatttactcatagtgccttcttctaaaataaaatacgatcct
ttaaaagaagaaaaacaactcttggaagcaaaacagcacgaactgaaacgaatagaagaa
gccaaacaaaaagtagctgatcaagaaaaacatcaagtggagaaacaggacacttttaca
gaaaaattaattactcagataataaaaaatcttcaagtgaaaatttccaacatccatatt
cggtatgaagatgatatcacaaatcgagacaacccactgtcatttggtatttcccttcaa
aatctcagcatgcagacaaccgatcaaaactgggttccatgtttacatgatgaaactgag
aaactagttcgtaagttagtccgattggataacctttttgcctattggaatgtgaagtct
cggctgttttaccttaatgattatgacgaatcactggacagcttgaagaatggtattgtc
actgacaatactgttccagaaggttatgattttgtgtttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcagattttgacttttctgcccctaagataaacctggat
gttgagttacatgatatagcagttgagttcaataagccacagtatttcagtgttatggag
cttctggaatcagttgatatgatgacgcaaaatctgccatacaggaaattcaaacctgat
gtacctcttcactgtcatgccagagaatggtggtcttatgctatacatggtattcttgaa
gtaaatatctgcccccggttacgaatgtggtcatggaagcatattagagaacacaggcaa
aagatgaagaagtataaagatctgtataaaaaaaagataacaactaagaagccagctggt
gaaattctcatcgctttggaggagttggaaaagaccttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggcaaagaaagctggatataggattttcagagaaggt
gcagaagattcagaggaaaataaaggatggtttagttggctgtggacttggtcagaacca
aaaagtaaagaacaaccagatgttaaacctggaattcttgaagagatgttgacacctgaa
gaaaaaactttactctatgaagcaattggctatagtgaaacagcagttgatcccaccttg
ccaaaaacatttgaagccatgaagttttttgttcacttgaaaagcatgtctattgttcta
agagaaaaacaagagacacctgagctgttggatattgtagtagaagaatttagcactttg
attgtgcaaagaccaggagcacaagccattaaatttgaaaccaaaattgattcatttcat
gttactggcttgccagataattcaacaaaacctcgcctcctatcttcattggatgatgct
acttcactcttccaaattatatttgagataaatccgttagatgaaactgttgctcaaagg
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacagtgaatagtata
gtggaattcttcaggcctccaaaagaggtaaatctagcacagctcacgtcagtgactttg
acaaaacttgaagaatttcgtgacaagacagcaacaggactgctgtacattattgaaaca
cagaaagttcttgatctcagaattaatctgaaggcttcctatgttattatcccacaagat
ggaatttttagtcctacatcaaatctgcttcttttagatcttggtcatctaaaggtgaca
agtaaaagtcgtttggaattgccagatatgaaacaaggaggagccaggcttgaagagatc
atgcatagagcttatgattcctttgacgttcagcttacaagcatacagctgctttacagc
acagttggtgataattggagagaagcgcgaaaattgaatgtatctacacagcatattttg
gtacctatgcactttaatgtggaactctctaaggccatggttttcatggatataaggatg
cccaaattcaagatttttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaaggaattttggaattgattgaaagcattccgaaacccacacctacacctgaagca
tatgcccctgccaaaccatttcagattcaaaggtccacttctttgggaacatcacagatt
tcacagaaaatgcttcctttcttggagcttccatgtgttgaagatgattctgaagaagaa
tattttgatgcaccttgtagtcctttggaagagcctcttcagtctcccactggagttcaa
agttgtcagcagaaaaagattcaaaagccagattgttcaaaaaatatgattcagtataaa
ataagatttgaagtgccagaggttttgattcagttttatcaccttgttggagattgtgaa
ttacctgtggtagaaattgatgttttaggattgggcacagatgttgaacttagaacattt
gatttgaaagcaaatgcctttttgaaagagttctgcctaaaatgcccagaatactttgat
gaaaacaagaaaccaatttatttggttacaacactggataatacgatggaagatctgcta
acattggaatatgtgaaggctgaaaagaatctgcctaacttgaaaagtacttataacaat
gctgtacaactgattaaggtgaatttttcctctttggatattcatttacatactgaagca
cttctgaatacaataaattattttaataatatacttccacagttggaagaaaaatcagcc
ccagtgtctgttgcagagactgaagacaaaggagaggtcattaaaaaaatgcctttaaaa
ctatcgaagaatgaagatattattaacttgcaaattttagcagaattatcttgtttacag
atctttattcaagatcagaaacgtaacatttctgaaattaagattgaagggcttgattct
gagatcattatgaggcctgcagcaactgaaataaatgcaaaactaaggaatatcattgtt
ttggattctgataaaacagctgtatacaaaaaggctgtttacatcactggaaaagaagtg
tttagcttcaaaatgatttcttttgtggatgcaactgctggttctgcatacacagatatg
aatgtggttgatgttcaagttaacttaactgttggttgcattgaagtagtttttgtcaca
aaatttctatactctatattggcttttatagataattttcaagcggctaaacaggctttg
gctgaggctactgttcaagcagcaggaatggctgctactggtgtaaaagaattggcacag
aggagttctagaatggcattggatgttaacatcaaagccccagtggtagtcatcccacaa
tctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgacaaacaca
ttccatataataacagagagccagagcaaccccccaccagttattgatttgataacaata
aggctgagtgaaatgcgactatacaggactcaatttattaatgatacataccaggaagta
ctagatctgctactgccattaaatcttgaggtgattgttgagcggaatttatcttgggag
tggtaccaggaagttccttgttttaacataaatgctcagttaaagcccatggagttcatt
cttagtcaagaagatttaacaactatttttaaaacattatatggcaatatatggtacgaa
gaaggtgatggtgcctcacctggaggagtaaaagatcagagtagtgttaatagtggagtt
actaatgcttcacaccatttagaaggaacaactgtagtgaccgctgctgtggtagaagta
cattcacaggcctctcaagttaagacaacactgaatatgagctttagaacggactatctc
accatggtactgtatagtccaggtcttgaaaagacttcctttacagatgttcgtgatcct
tctctgaaacttgctgaatttaagttggagaatatcataagcactgcaaaaatgtataca
gatgactcaacattttcttccttttcattaaaaaattgtattttagatgataaaaggcct
catgtcaagaaggcaactcctagaatgataggactgacagttggttttgacaaaaaggac
atgatggatgtaaagtacaggagagtcagagatggttgggtggctgatttagtccttcaa
gaaacgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttcttgag
gcctacaccacaggcactgctgtagaaaccagtgttcaaacatggactgctaaggaagaa
gtacctgtacaagaatcagtaaagtgggaaatgaatattattattaaaaatcctgaaatt
gtgtttgtggctgatatgacaagaagtgatgctcctgccttagtcattacaacacagtgt
gaaatttgttggaaaggtgaccttgagaataatacaatgactgctgccattaaagatctt
caagtgagagcctgcccatttcttccagtcaagagaaaaggcaaaatcactactgttttg
cagccctgtgatttgttctatcaagctactcaagtacgtacagatccacaagtgatggat
atatcagtaaaatccctcacactaaaggtttcaccagtcatcataaatactgtgattacc
ataacatcagcactttatacatccaaggacaccatcccacaggaaactacttctacagca
catttatgggagaagaaggatacaaagaatttaaaaatgtggtttcttgaagaaccaaat
gaagttgaaaacaaagctcccacaactgaattgatacttaaaggagagatcataagaatg
aacattgattctatctttatagttcttgaggctggaattggtcatagaacagtgcctatg
ctgctggcaaagtcacgtttttcaggggaaggcaaaaactggagttccttgataaatctc
tactgtcagcttgaactagaagtacattattacaatgaaatgttcggtgtatgggagcct
ttgcttgaacccttagaaattgatcagactgaggattttagaccatggaatcttggaatc
aagatgaaaaagaaaacaaaaaaggccattgttgagtcagatactgaagaagaaaattac
aaagtgccagaatataaaaccgttatcagtttccattcaaaagaccaactaaacattaca
ttatccaaatgtggccttgtaatgttgaataatttagtcaaggcatttacagaggctgcc
actggaacctcaactgccttcatacgggatctagcgccatttatgattttgaattctctt
ggacttactgtctctgtttcaccaagtgattcttttagtgtactcaacctcccgttggca
aaatcatacgtattgaaaaatgaggagagtttaagtatggactacgtgggaactaaagac
aatgatcatttcaatgcaatgactagcctaagcagtaaactcttcttcattcttcttaca
cctgccaaccactctactgctgataaaattcctttaacaaaagtgggacggcgactgtac
actgtaagacacagagagtctggggttgaaagatcaattgtttgtcaagttgatggagtg
gaaggaagtaagaaggtaacaattcgctccccagtgcagataaaaaatcatttttcagtc
ccactttctgtttatgaaggggacattttgttgggaacggcctcacctggaaatgaattc
aacataccattaacatcttaccgatcacccctttctctgaggccagaagatgaggactat
caagcatgtgaaagaattgactttgaagaaattataaaaaatgatggcacttttctaaaa
aagaaatgtagatctataaatgctgctaaaaaaccatttatcattaatgttgtcccagaa
aaagataatttggcttctctgtcagtgtattcagaagatggttgggatttaccatatata
atgcatttgtggccacctatcctgcttcgaaatcttcttccttacaaaattgcttactat
atagagggcactgaacataaagtttatactctaaatgaaggacattcagcccatatttgt
actgtgcagttggataaagccatactacatttaaaattacttgactatcttaatcatgat
tggaaaagtgaatatcatataaaacctaatcagcaagatattagtttcatcaattttacc
tgtgttacagaaatagaaaagactgatttagatattgctatccatgtgacttacaatact
ggccagacagttgtggcatttcatagtccttactggatggtcaataaaactggtcgaatg
ttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaagccagtt
ctcttttcttttcaaccaaagcacttttttaataataataaggttcagctgatggtaact
gatagtgaattgtcagatcagttttcgattgatactgttggtagtcatggagctgttaaa
tgtaaaggcctgaaaatggactatcaagttggtgtcactatagacctcagcagttttaac
attaccaggattgtgacatttacccctttttatatgatagaaaacaaaagcaagtatcac
atatcagtcactgaacagggaaatgataagtggctctctcttgatttggagcagtgtatc
cccttttggcctgaggatgcttctaatgcacttcttattcaagttgaaagacatcaaggc
cctcccaaaaagatacattttaacaagcaagaaaattgtattttattgcgcctggataat
gagcttggaggtattatagcagaagttaatttggctgaacattctacagttattacattt
tcagattatcatgatggagcagctacattcctattaataaatcacaccaagagtgacatt
gttcagtacaatcaaagttctctcagtgaaatagaagattccctccctcctggaaaagca
gtattttatacatgggctgatccaatgggctctagaaagctgaagtggagatgtggaaaa
agccatggtgaagtaacacaaaaggatgatatgatgacacctataaattcggggaaaaag
accatttatttagtttcattctttgaaggcttacaacgcattattttattcactgaagat
ccaagggtatttaaagcaacatatgaaagtgagaaagcagagttagcggagcaagaaatt
gtgttggccttacaagatgttggaatttctctcgtcaacaattacacaaagcaagaagta
gcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaaggca
agatggaagccaatgagtgtaaagcacactgagaagttagagaaagaatttaaggaatat
actgaatcttcaccttcagaagataaggttattgaattggacactaacattccggttcgc
ttcacacctagtggtactaatatgaaaattctgcaaccacatgtaatagctatacgaaga
aattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcatttaga
attcaaatttacagaatacagatccaaaaccagatacaaggtgctatatttccatttgtg
ttttatccaattaaacctcccaagtcagtcaccatggattcagctccaaagccctttaca
gatgtcagtattgtcatgagatctgctgggcattcccagatatcacgtattaagtacttc
aaagtgttgatccaagaaatggatctcagattagatcttgggtttgtttatgctttagca
gaacttatgacagaagctgaagtgagtgaaaaaaatgaggttgaactttttcataaagat
atagaagctttccaagaagaatataaaacagcttcattagtagattcatcacaagttagt
ctctatgaatatttccatatatctcctatcaagttgcatttaagtgtttcactgagttcg
ggcagagaagaagccaaagattcagaaaaacatgaaggactggtggctgttcattcttta
aatcttttgctgaagagtatcggtgccactcttacagacgtccaagatgtagtttttaag
cttgcattttttgaactcaactatcagttccatacagcttctgaactacagtctgaagta
ataagacactattcaaaacaggccattaagcaaatgtatgtactcattcttggacttgaa
gttttgggaaatccctttggcttgattagagaattttctgaaggtgtggaagcatttttt
tatgaaccttaccagggagccatccagggtccagaagagtttgtggaggggatggcgcta
ggactgaaggcgctggttggtggagctgtcggtggattagctggtgctgcctccaaaatc
actaatgctatggctaaaggggtggcagctatgactatggatgaagactaccaacagaag
agaagagaagcaatgaataagcaaccagctggtcttagagaaggcatcactcgtggagga
aaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaaccaatcaaa
ggagctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaaggtttagttgga
gcagtggcaaggccaactggaggcatcatagacatggccagcagtacatttcagggaata
aaaagagctacagagacttctgatgaagtggagagcctgcgaccccctcgattctttaat
gaggatggagttatcagaccttacaggttgagggatgggactggaaaccagatgttacag
gtcatggaaaatggaagatttgcaaaatacaagtattttacccatgtcatgatcaataaa
acagatatgttaatgataactaaaagtggtgtattgtttgtaacaaaaggaacatttgga
cagcttacatgtgagtggcagtatagttttgatgaatttaccaaagagccattcattgtt
catgggagaagattacgcattgaagcaaaggaacgggtgaagtctgtgtttcatgccaaa
gagtttggaaaaataattaacttcaagaccccagaggacgctaggtggatcctcacaaaa
ctagaagaagcaagagaaccttccccgagattctga
DBGET
integrated database retrieval system
