Nyctereutes procyonoides (raccoon dog): 129499797
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Entry
129499797 CDS
T09008
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03082
ATP-dependent chromatin remodeling
npo04714
Thermogenesis
npo05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129499797 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129499797 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
129499797 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npo03021
]
129499797 (SMARCA2)
03036 Chromosome and associated proteins [BR:
npo03036
]
129499797 (SMARCA2)
Transcription machinery [BR:
npo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129499797 (SMARCA2)
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
129499797 (SMARCA2)
Chromatin remodeling factors
BAF complex
129499797 (SMARCA2)
PBAF complex
129499797 (SMARCA2)
GBAF(ncBAF) complex
129499797 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
129499797
NCBI-ProteinID:
XP_055165647
LinkDB
All DBs
Position
Unknown
AA seq
1574 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GSADFPQEGMHQMHKPIDGMHDKGIVEDIHCGSMKGTGMRPPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPMSGGGPTPPQMPPSQPGPLISGDPQAMSQPNRGPSPFSPVQLH
QLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQPQHQQPPQPQPQAQQPQQQAL
VNYNRPSGPGPELSGPSTPQKLPVPAPSGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPS
PILQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKA
TVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQ
KIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETE
RIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEK
KKRRRRKKKAEEIAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQ
LDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQDTEEKILLDPNSEEVSEKDAKQ
IIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMV
SLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWA
PSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRM
KNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAP
FAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKI
LYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYS
NGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRL
DGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQA
QDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAF
LQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLME
EDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEE
MEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVIN
YKDRCNVEKVPGNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERI
RNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDES
NEEEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQ
DENEQSEASGTDDE
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacagaccctggcgccatgccccatccagggccttcaccgggaccggga
ccctctcctggaccaattcttggacccagtccaggacccggaccatccccggggtctgtc
cacagtatgatggggccaagtcctgggcctccgagtgtctcgcaccccatgccaacgatg
ggctctgctgacttcccacaggaaggcatgcatcaaatgcataagcccatcgatggtatg
catgacaaggggattgtagaagatattcattgtggatccatgaaaggcaccggtatgcgg
ccacctcacccggggatgggtcctccccagagtccgatggatcaacacagccaaggttac
atgtcgccacacccgtctccgctgggagccccagagcacgtctccagccctatgtcggga
ggcggcccgaccccaccccagatgccgccgagccagccagggcccctcatctcgggcgat
ccgcaggcgatgagccagcccaacagaggtccctcgcctttcagccctgtccagctgcat
cagctgcgagcgcagattctggcttacaaaatgctggcccggggccagcccctccccgaa
acactgcagctcgcagtccaggggaagaggacgttgcccggcatgcagcagcaacagcca
cagcatcagcagcccccgcagccccagccacaggcccagcagccccagcagcaggccctt
gttaactacaacagaccatctggcccggggccggagctgagcggcccgagcaccccgcag
aagctgccggtgcccgcgcccagcggccggccctcgcccgcgccccctgctgccgcgcag
ccgcccgcggccgccgtgcccgggccgtccgtgccgcagccggccccggggcagccctcg
cccatcctgcagctgcagcagaagcagagccgcatcagccccatccagaagccgcaaggc
ctggacccggtggagatcctgcaggagcgagagtacaggcttcaggctcgcatagctcat
aggatacaagaactggaaaacctgcctggctctttgccaccagatttacgaaccaaagca
actgtggaactgaaagctcttcggttactcaatttccaacgtcagctgagacaggaggtg
gtagcctgcatgagacgggacacaaccctggagacggccctcaactccaaagcctacaag
cggagcaagcgccagaccctgcgggaggcccgcatgacagagaaactggagaagcagcaa
aagatcgagcaggagaggaagcgccgccagaagcaccaggaatacctgaacagcattttg
caacatgcaaaggatttcaaggagtatcatcggtctgtggctgggaagatccagaagctg
tccaaagcggtggcaacttggcacgccaacactgagagagagcagaaaaaagagacagag
cgaatcgagaaggagagaatgcgcagactgatggctgaagatgaagagggctacaggaaa
ctgatcgatcaaaagaaagacaggcgtttggcttaccttctgcagcagactgacgagtat
gtggccaacctgaccaacctggtttgggagcacaagcaagcccaagcagccaaagagaag
aagaagagaaggaggaggaagaagaaggctgaagagattgccgagggaggagagtctgcc
ctgggaccagatggagagcccatagatgaaagcagtcagatgagtgacctgcctgtcaaa
gtgactcacacggaaactggcaaggtcctgtttggaccagaagcacccaaagcaagtcag
ttggacgcctggttggaaatgaaccctggttacgaagttgcacctcgatccgacagtgag
gagagtgattctgattacgaggaggaggatgaggaagaagagtccagtcggcaggacaca
gaagagaaaattcttctggatccaaacagtgaagaggtttctgagaaggatgccaagcag
atcattgagacagctaagcaggacgtggacgatgagtacagcatgcagtacagtgccaga
ggctctcaatcctactacacggtggcccatgccatctccgagcgggtggagaagcagtct
gccctcctcattaacgggaccctgaagcattatcagctccagggcctggaatggatggtt
tccctgtataataacaatttgaacgggatcttagctgatgaaatggggctagggaagacc
atacagaccattgcactcatcacttatctgatggagcacaaaagactcaatggcccctat
ctcatcattgttcccctttcgactctatctaactggacatatgaatttgacaaatgggct
ccttctgtggtgaagatttcttacaagggcacccctgcaatgcgtcgctcccttgtaccc
cagctgcggagtggaaaattcaacgtcctcttgactacttatgagtacattatcaaagac
aagcacattcttgcaaagattcggtggaaatacatgatagtggatgaaggccaccgaatg
aagaatcaccactgcaagctgactcaggtcttgaacactcactatgtggcccccagaagg
atcctcctgactgggaccccactgcagaacaagctcccagaactctgggccctccttaac
ttcctcctccctaccatttttaagagctgcagcacatttgaacagtggtttaatgccccg
tttgccatgactggagaaagggtggacttaaatgaagaagaaaccatattgatcatcagg
cgtctacataaggtgttgagaccatttttactgaggaggctgaagaaagaagttgagtcc
cagctgccagaaaaagtggaatacgtgatcaagtgtgacatgtcagcgctgcagaagatc
ctctatcgccacatgcaagccaaagggatcctcctcacggatggctctgagaaagataag
aaggggaagggcggtgctaagacactcatgaacactatcatgcagttgagaaaaatctgc
aaccacccatacatgtttcagcacattgaggaatcttttgctgaacacctgggctattca
aatggagtcatcaatggggctgagctgtatcgggcctcggggaagtttgagctgcttgat
cgtattctgccaaaactgagagccactaatcaccgcgtgctgcttttctgccagatgacg
tccctcatgaccatcatggaggattactttgcttttcggaacttcctgtatctccgcctt
gacggcaccaccaagtctgaggaccgtgctgctttgctgaagaaattcaacgagcccggg
tcccagtatttcatcttcctgctgagcacccgagcgggcggcctgggcttgaacctccag
gcagctgataccgtggtcatctttgacagcgactggaatcctcaccaggacctgcaagca
caagaccgagctcaccgcatcggccagcagaacgaggtccgggtgctgaggctgtgcacg
gtgaacagcgtggaggaaaagattctcgcagccgcaaagtacaagctgaacgtggatcag
aaagtgatccaggcgggcatgtttgatcagaagtcttcgagccacgagcggagggcattc
ctgcaggccatactggagcacgaggaggagaacgaggaagaagatgaagtgccagatgac
gagactctgaaccagatgattgcccggcgagaagaagaatttgatctctttatgcgtatg
gacatggaccggcggcgggaagacgcccggaacccgaagcggaagccccgcttgatggag
gaagatgagctgccctcctggattattaaggatgacgccgaagtggagcggctcacgtgt
gaagaagaggaggagaaaatatttggcagggggtctcgccagcgccgggacgtggactac
agcgacgccctcacggagaagcagtggctgagggccattgaagacggcaatttggaagaa
atggaagaggaagtacggctcaagaagcgaaaaagacgaagaaatgtggataaagatccg
gcaaaagaagatgtggaaaaagccaagaagaggagaggccgccctccagctgagaaacta
tccccaaatccccccaaactgacgaagcagatgaacgccatcatcgatactgtgataaac
tacaaggacaggtgtaacgtggagaaggtgcccggtaattctcagttggaaatagaagga
aacagttcagggcggcagctcagtgaagtcttcattcagttaccttcgaggaaggaatta
ccagaatattatgaattaattaggaagccggtggatttcaaaaaaataaaggaaagaatt
cgtaatcacaagtacaggagcctgggtgacctggagaaagatgtcatgcttctctgtcac
aatgctcagacgttcaacttggagggatcccagatctatgaagactcgatcgtcttacag
tctgtgtttaagagtgctcggcagaaaattgccaaagaggaagagagtgaggacgaaagc
aacgaagaggaggaggaggaagatgaggaggagtctgagtcagaagcaaaatccgttaag
gtgaaaatcaagctcaataagaaagacgagaaaggccgggacaaaggcaaaggcaagaaa
aggccgaatcggggaaaagccaagcctgtagtgagcgatttcgacagtgatgaggagcag
gatgaaaatgaacagtcagaagcaagtgggactgatgatgagtga
DBGET
integrated database retrieval system
