Nyctereutes procyonoides (raccoon dog): 129499818
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Entry
129499818 CDS
T09008
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PNLDC1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129499818 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129499818 (PNLDC1)
Enzymes [BR:
npo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
129499818 (PNLDC1)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
129499818 (PNLDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
129499818
NCBI-ProteinID:
XP_055165689
LinkDB
All DBs
Position
Unknown
AA seq
601 aa
AA seq
DB search
MDVGADEFEQSLPLLQELVLGADFVGEARGGRGGRGSGGPGGGGARPSGDGRGDGRRDGH
QAAGGAQRASEGGRIPSPARAPGPRAPVRPQRSRAGLDIEFTGLRSNLSRPQQISLFDLP
SEWYLKTRHSVQQFTICQIGLSVFSSIEGESNKYVAHSCNFFLFPTTFGILDSEFSFQAS
SVQFLNQYGFDYNKFLKNGIPYMNEEQEKKIKHNILTGNWRVRSSLDKDQIKVVIDEVTR
WLDLAEEGDWMTLPGIAGFQAFEVQLVLRQALPDIWTVLRDQGIIVKKVSKQHRWYLENT
SCDRESCWKEKILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQF
KLNIHNLFPILIDTKNVTKDIWKELNFPRVSNLSEVYEVLNSDLNPTRNSGPVVIHASKC
EKYVETKYPHEAAYDAFLCGSVLLKVAHLLLWRVHSAGPMPEPSFSLYLDVLAPYVNQVN
LIRAGVPKINFSGPDCPSIRPPILLLRVRRWPGVSEQQVYREFQNVCKFDVRRLSRSQFL
LLTNKFKDARSILKEYRGHPTLQVSLYRYWRHSPNINCLLQVCGVVTTWALLALLLGRPG
P
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgggcgccgacgagttcgagcagagcctccctctgctgcaggagctggtcctg
ggcgccgacttcgtgggtgaggcgcggggaggccgcggaggccgcggctcgggtgggccg
ggtgggggaggggcgcggcccagcggggacgggcgcggggacgggcgccgggacgggcac
caggccgcgggaggcgcccagagggcctcggagggcgggcggattccttcccctgcccgg
gcccccgggccccgggccccggtgcggccccagcggagcagagccggtctggacatcgag
ttcacgggccttcgctccaacctgtcccggccccagcagatcagtctttttgacttgccc
tcggagtggtatctgaagacccgccacagtgttcagcagttcaccatctgtcagattgga
ttgtccgtgttttccagtattgaaggagagtcaaacaagtatgtagcccattcatgtaac
ttctttctcttccctacgacatttgggattttggattccgaattctctttccaggcttct
agtgttcagtttctgaatcagtatggcttcgactataacaagtttctcaaaaatgggatc
ccctatatgaatgaagagcaggagaagaaaatcaaacacaacatcctgactgggaactgg
agagttcgcagttctctggataaagaccagatcaaggtggtgattgatgaggtgacacgg
tggctggatttggctgaggagggcgactggatgactctccctggtatcgctggcttccag
gcctttgaggtccagttggtgctgaggcaggccctccctgacatctggacggtcctgaga
gaccaggggataatagtaaaaaaagtgagtaaacaacatcgctggtatcttgagaacacc
tcctgtgatcgagagagctgttggaaggagaagattctcctctctgcgaggggcttctcg
gtgtttttccagatgctggtgaaagcccagaagcccctagtgggccacaacatgatgatg
gacctgctgcatctccacgagaagttcttcaggccgctcccagaaagctatgatcaattt
aagttgaatatccacaacctatttcccattctcattgacaccaagaatgtgaccaaggac
atctggaaggaactgaattttccaagagtttcaaacctttcagaagtttatgaagtccta
aacagtgacttgaatcctaccagaaattctgggccagtggttattcatgcaagcaagtgt
gaaaaatacgttgagaccaagtacccccacgaggctgcctatgatgccttcctttgtgga
tcagttcttctgaaagtggcacacttgctcctatggagagtacacagtgccggtcccatg
cctgagccctccttttctctctaccttgacgtgctggctccctatgtgaaccaggtgaat
cttatccgagctggggtccctaagattaacttttctggtccagattgccccagtatccgg
cctcccatcctcctcctgcgtgtccgtaggtggcctggggtcagcgagcagcaagtctat
cgtgagtttcagaatgtctgcaagtttgatgtgcggcgcctctcacggagccagttcctg
ctcttgaccaataagtttaaggatgctcggagcatcctgaaggagtataggggccaccct
accctgcaggtctccctgtaccgatactggagacactccccgaacatcaactgcttgtta
caggtctgcggtgtggtcactacctgggctctcctggcccttctcctcggaagacctggc
ccctga
DBGET
integrated database retrieval system
