Nyctereutes procyonoides (raccoon dog): 129499840
Help
Entry
129499840 CDS
T09008
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npo03021
]
129499840 (SCAF8)
03041 Spliceosome [BR:
npo03041
]
129499840 (SCAF8)
Transcription machinery [BR:
npo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129499840 (SCAF8)
Spliceosome [BR:
npo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
129499840 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129499840
NCBI-ProteinID:
XP_055165730
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQGVAFNKKLMDRFDFGEDSEHSEEP
KKEISASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPAVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPTIPPVVPTSLVQPPLSMTPETVKDVGFGSLVLPGGSVASNLATPTLPAGNVFNP
PTKQAEPEEKVPHLIEHQISSGENTRSVIPNDIPSSSAILGGQPPNVTSNSGILGVQRPN
VSSNSEIIGVRPSNVSNSSGIIGPQPPNILNNSGILGLQPPTVSSSSGLLGVLPPNIPNN
SGLIGVQPPNVPNAAGLLGTQPPAGPQNLPPLNLSSQRMPAMPMLDIRPGLIPQTPGPRF
PLMQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLVPGRQSVDNVPNPEK
RIPLGNDNIQQEGDRDYRFPPIEARESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDH
FGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEER
GRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGR
DRIQNTWVPPPHARVFDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKL
TSSSEINKEKSDTVADIESEPVVESTETEGT
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgtgaaaaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactacaaacca
cccatttctaaagcaaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagcgttgagaaattcattcagaaatgtaaaccagaatacaag
gtacctggactttatgttattgactccattgtacgacaatctcgacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtattaaatctatggcagaag
aataatgtgtttaagagtgagattattcagcctcttttggatatggcagcagggatacct
cccccagttgttacacctgttttggccagtactactgcagctatgagcaacaccccagga
actcctgttacacctgttactccagccaatgtagtccagggtttaccggatccatgggta
tctcagataacaaacacagatacacttgcagcagtagctcaaatcctacaaagtcctcaa
ggccaacagcttcagcagttgatacagactttacaactacaacagcaaaagcctcagcct
tctattctgcaggccctggatgctggtcttgttgtgcagttgcaggctctcacagcacag
cttaccgctgcagctgcagcggccaacaccctgaaccccttagaacagggagtggctttc
aacaagaagttgatggataggtttgattttggggaagattctgagcatagcgaagaacct
aaaaaggaaatttcagcttctcaactttctcatgtttcagaatctgtgaacaattccatt
tttcatcagatagcagaacaactacaacagcaaaaccttgaacatctcagacagcaactc
ctagaacaacaacagcctcaaaaggcaacccctcaggatagtcaagagggaacatttgga
tcagagcattccgcatcaccctcacaagggagcagtcaacagcatttccttgaacctgaa
gcaaatttggatgattctatagatattcaacaacaggatatggatatagatgaaggacaa
gatggagtagaagaggagatctttgaacaggaagcaaagaaagtggctgttcgctcaaga
tcaagaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtctcggtcacga
tctggttctcgaaagcgtaaacacagaaagcgatcacgctcacgctcaagagaaagaaag
aggaaatcatcacgttcatactcaagtgaaaggagagcaagagaaagggagaaagaacga
cagaagaagggattacctccaattagatctaaaacattaagtgtatgtagtactactttg
tgggttggtcaggtggataagaaggcaactcagcaagatttaaccaatctgtttgaagag
tttggacaaattgaatccattaatatgattcctcccaggggctgtgcttacgtctgcatg
gttcatcgacaagatgcttttcgggctcttcagaaacttagttccggatcatataaaatt
gggtccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatataaa
caattctgggatgtggatcttggagttacatatataccgtgggaaaaagttaaagtggat
gatttggaaggttttgcagaaggaggcatgattgaccaggaaactgtaaatactgagtgg
gaaactgtgaaaagctcggaacctgttaaagagacagtccagacaactcagagcccaact
ccagttgaaaaggagacagtggtcacaacccaggcagaggtttttcctccacctgttgcc
atgttacagattccagtagcgccagctgtgcctgcagttagtttagtcccaccagcattt
cctgtctccatgccagttcctcctcctggattcagtccaatccctccacctccttttctg
agagcaagttttaacccttcacaaccaccgcctggtttcatgccacctccagttccacca
cctgttgtaccaccacctactattccaccagtagtaccaacatctttagtgcagccacca
ttatccatgactccagaaactgtgaaagatgttggatttggtagtcttgttttacccggt
ggttctgttgccagcaatcttgctactcccactctgccagctggaaatgtttttaatcct
ccaactaaacaagcagagcctgaagaaaaagtacctcatcttatagagcaccagatttca
tctggtgaaaacacaagatcagtgattccaaatgatattccaagtagctctgcaatttta
ggaggacagccgccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaat
gtatcgagtaattctgaaattattggagtccggccatctaatgtttccaatagttctggg
attattggaccccagcctccaaatattctgaataactctggaattttgggactacagcca
ccaactgtgtcaagtagttctggacttttgggagtgctacccccaaatatccctaataat
tccggacttataggagtacagccaccgaatgttccaaacgctgctggacttttgggaaca
caaccaccagctgggcctcaaaacttaccccctttaaatctctctagtcaaaggatgccc
gcaatgccaatgttagacattcgtccaggactaataccacagacacctggaccaagattc
cctttaatgcagcctggaattccaccccaacggggaatccctcccccatcagtacttgat
tcagctcttcatccaccaccccgtggtccttttcctccaggagatatttttagtcagcca
gaaagaccttttctagtccctggaagacaaagtgtagacaatgttcctaatccagagaaa
aggataccacttggaaatgataacattcaacaggaaggagatagagattaccggtttcct
cccattgaagccagggaaagcattagtagacctcccccggtggatgttagggatgtggtt
ggacggcctatagatccaagagaaggtcctggaaggcctccattagatggtagggatcat
tttggaagacctcctgtcgatattagagagaatcttgtgaggccaggcatagatcatctt
ggtcgaagagaccattttggctttaatccagagaagccctgggggcatagagattttgat
gagagagaacatcgggttctacctgtctatggtggtccaaaaggcttacatgaagaaaga
ggtagatttcgatctggaaactatcgatttgatcctagaagtggtccttggaacagagga
tttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagg
gatagggatgacagagattttgatttctgcagagaaattaatggaaaccgtcttggacga
gatagaattcaaaacacctgggtcccccctcctcatgctcgggtttttgatttttttgaa
ggggccacttctcaacgaaaaggtgataacgtgcctcaggttaatggtgaaaatactgaa
agacatgcccaaccaccacctttaccagtgcagaatgatcctgaactttatgaaaaactg
acatcttcaagtgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaa
ccagtggtagaaagcacagaaactgaggggacataa
DBGET
integrated database retrieval system
