Nyctereutes procyonoides (raccoon dog): 129500938
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Entry
129500938 CDS
T09008
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
npo01001
]
129500938 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npo04121
]
129500938 (TRIM28)
Enzymes [BR:
npo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129500938 (TRIM28)
Protein kinases [BR:
npo01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
129500938 (TRIM28)
Ubiquitin system [BR:
npo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
129500938 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
PHD_2
PHD-1st_NSD
zf-C3HC4
zf-RING_2
YaaC
Motif
Other DBs
NCBI-GeneID:
129500938
NCBI-ProteinID:
XP_055167839
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MAASAAAASAAAAAAASGSPGPGEGSAGGEKRAAASSAAASASASASASSPAGGGGEALE
LLEHCGVCRERLRPEREPRLLPCLHSACSACLGPPAPAANSSGDGGAAGDGAVVDCPVCK
QQCFSKDIVENYFMRDSGSKAATDSQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAH
QRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQ
YQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMAILQ
IMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTAL
LLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGPT
SMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGVKRSRSGEGEVSGLM
RKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQPGSAPPGAP
GAPPLPGMAIVKEEETEAAIGAPPVATEGPETKPVLMALAEGPGAEGPRLASPSGSTSSG
LEVVAPEGTSAPAGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGE
EWSCSLCHVLPDLKEEDGSLSLDSGDSTGVVAKLSPANQQKCERVLLALFCHEPCRPLHQ
LATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADV
QSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLSAQELSSGPGDGP
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcctccgcggcggcggcggcagccgcctcgggcagcccg
ggcccgggtgagggctcggctggcggcgaaaagcgcgccgccgcctcgtcggccgcggcc
tcggcctcggcctcggcttcggcctcgtcgcccgcggggggcggcggcgaggcgctggag
ctgctggagcactgcggtgtgtgccgggagcgcctgcgccccgagagggagccgcgcttg
ctgccctgcctgcattcggcttgcagtgcctgcctcgggcccccggcgcccgccgccaac
agctcgggggatggcggtgcagcgggtgacggcgccgtggtcgactgtcctgtgtgcaag
cagcaatgcttctccaaagacattgtggagaattactttatgcgtgacagtggcagcaag
gctgccacagactcccaggatgcaaatcagtgctgcactagctgtgaggataatgcccct
gccaccagctactgtgtggagtgctctgagccactgtgtgagacgtgtgtggaagcacac
cagcgggtgaagtacaccaaggaccacaccgtacgctccactgggccagccaaatcaagg
gacggtgagcgcacggtgtactgcaatgtgcacaagcacgagccccttgtgctgttctgt
gagagctgtgacaccctcacctgccgggactgccagctcaatgcccacaaggaccaccaa
taccagtttctggaggatgcagtgaggaaccagcgcaagctcctggcctcgctggtgaag
cgccttggggataagcatgcaacactgcagaagaacaccaaggaggttcgcagctcgatc
cgccaggtgtctgacgtacagaagcgtgtgcaggtagatgtcaaaatggccattttgcag
atcatgaaggagctgaacaagcggggccgtgtgctggtcaatgatgctcagaaggtgact
gaggggcagcaggagcgcctggaacgacaacactggaccatgaccaagatccagaagcac
caggaacacatcctgcgctttgcctcttgggctctggagagtgacaacaatacggccctg
ctgctctccaagaagctgatctacttccagctgcatcgggccctcaagatgattgtggac
cctgtagagccacatggcgagatgaaatttcaatgggaccttaatgcctggaccaagagt
gcagaggcttttggcaagattgtggcagagcgtcctggcaccaactcaacaggccctacg
tccatggcccctcctcgggctccagggcccttgagcaagcagggctctggcagtagccag
cccatggaggtacaggaaggctatggctttggctcagacgatccttattcgagtgcagag
ccccatgtgtcaggtgtaaagcggtcccgctcaggtgagggcgaggtgagtggcctcatg
cgcaaggtgccacgggtgagcctcgagcgcctagacctggatctcacggctgatagccag
ccaccagttttcaaggtcttcccaggcagcaccactgaggattacaatctcattgttatt
gagcgtggtgctgcagctgctgctgctggacagcctggatctgctccacccggggcccct
ggggccccaccactacctggcatggccattgtcaaggaggaagagacagaagctgccatt
ggagctccgcctgttgccacggagggtcctgagaccaagcctgtgctgatggctctggcg
gagggccctggtgccgagggcccccgcctggcctcacccagtggcagcaccagttcaggt
ctagaagtagtggctccagagggcacttcagccccagctggtggtccaggtgccctggat
gacagtgccaccatctgccgtgtctgccagaagccaggggatctagtcatgtgcaaccag
tgcgagttctgcttccacctggactgccacctgcctgccctgcaggatgtcccaggggag
gagtggagttgctctctctgccatgtactacccgatctgaaagaggaagatggcagcctg
agcctggacagtggtgatagcaccggtgtggtggccaagctctcgccagctaaccagcag
aagtgtgagcgtgtcttgctggccctattctgtcatgagccctgccgacctttgcaccag
ctggctactgactctactttctccctggatcagcctggtggcaccctggacctgaccctg
atccgtgcccgtctccaggagaagttgtcacccccatatagttccccccaggagtttgcc
caggatgtgggccgcatgtttaagcagttcaacaagctgacagaggacaaggcagacgtg
cagtccatcatcggcctgcagcgcttcttcgagactcgcatgaacgaggcctttggtgac
accaagttctcagctgtgctggtggagcccccccccctgagcctgcctggtgctggcctg
agtgcccaggagctatccagtggtcctggtgatggcccctga
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integrated database retrieval system
