Nyctereutes procyonoides (raccoon dog): 129502029
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Entry
129502029 CDS
T09008
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npo03021
]
129502029 (SCAF4)
03041 Spliceosome [BR:
npo03041
]
129502029 (SCAF4)
Transcription machinery [BR:
npo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129502029 (SCAF4)
Spliceosome [BR:
npo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
129502029 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
129502029
NCBI-ProteinID:
XP_055169364
LinkDB
All DBs
Position
Unknown
AA seq
1145 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPQATTNSVPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTAPAQP
PEQKAAFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDAAAAAAAAAAATTATTTATP
PVAVAPPAPTATAPTTTPAASPPQAPFGFPGDGMQQPAYTQHQNMDQFQPRIMAIQQDPV
HHQVPLPPNGQMPGFGLLPTPPFPPMAQSVIPPTPPVQQPFQASFQAQNEPLTQKAHQEM
EVEQPCIQEVKRHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSP
RSRSQERRDREKERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPI
ESINMIPPRGCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWD
VELGVTYIPWDKVKPEELESFCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGAETSHTEP
VSPIPKPLPVPVPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPG
VPPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINED
TTKDLSIGNPIPTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGV
APGPVIGLQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGP
GGFGMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQAQPQQPPPPQP
QPQQPPPAQQPPPAQQQPQPFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGNRNDD
RDNSNRERREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEENRGKEKPE
VTDRAGGNKTIEPPISQVGNVDTVSELDKGESESAVVKPSEELPAEATSSVEPEKDSGSA
AEAPR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctcgagccaagatgattcttatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagagtacaaggtt
cctggattatatgtaattgactcaattgtacgacagtctcgtcatcagtttggaactgat
aaagatgtttttgggccaagattctctaaaaacataaccgccacattccaatatttatat
ctttgtccatctgaagataagagcaaaatagttcgtgtactgaacctttggcaaaaaaat
ggagtattcaaaattgaaattatccagcctcttttggacatggctgcaggaaccagtaat
gctgccccagtagcagaaaatgttacgaataatgaaggttcacctccacctccagttaaa
gtttcttctgaacctccccaagccactacaaactctgtaccaactgtaccacagttgcct
agctctgatgcttttgctgctgtggcccagctctttcagacgactcaaggtcaacagctt
cagcagatccttcagacttttcaacagcctccaaaaccacagtctccggccattgacaat
gctgtgatggctcaggtccaggctatcacagctcagttaaagacagctcctgcacagcca
cctgaacaaaaagctgctttccccccacctgagcaaaaaactgcatttgacaagaagcta
cttgatagatttgattatgatgatgaaccagaagctgtggaagaatcaaagaaggaagat
gccgccgccgccgccgccgccgccgccgccgccaccaccgccaccaccaccgccacacct
cctgtggcagttgctcctccagcgcccaccgccaccgcgcccaccaccacacctgccgct
tcccctccacaggcaccctttgggtttcctggagatggcatgcagcagccagcatataca
caacatcaaaatatggatcagtttcagcctcgaattatggcaatacagcaggatccagtg
caccatcaggttccacttcctcctaatggacagatgccaggatttggccttcttcctaca
cctccatttcctcccatggctcagtctgtgattcctccaactccacccgtgcagcagcct
ttccaagcttctttccaggcacaaaatgaaccacttacacagaaggcacatcaggaaatg
gaagtagaacagccttgtattcaagaggttaagcggcacatgtctgataacagaaagtca
agatctaggtcagcatccaggtcaccaaaaagaaggcgatctcgatctggctctagatct
cgaaggtcccgtcatcgacgttctcgatctcggtccagagatagacgccggcattctcct
agatctcggtcccaagaaaggcgagatagagaaaaagaaagagaacgccgacaaaaaggg
cttcctcaaatcaaaccagaaactgcgagtgtttgtagcactacactctgggtgggacag
ctggacaaaaggactactcaacaggatgttgccagtctcttagaagagtttggtccaatt
gaatcaattaatatgattcctcccagaggttgtgcctatattgttatggttcataggcaa
gatgcttatcgtgccctgcagaaactgagccgaggaaactataaagtgaaccagaaatcc
ataaagattgcctgggctttgaacaaaggaataaaggcagattataagcagtattgggat
gtagaactgggtgttacttatattccatgggacaaagtcaagcctgaagaactggagagt
ttttgtgaaggagggatgttggacagtgatacacttaatccagattggaaaggaattccc
aagaagcatgaaaatgaagttgctcaaaatggaggggcagaaacctcacatacagaacca
gtatcacccatacctaaacctttaccagtgcctgtccctcctattcctgttcctgcacct
ataacagtgccacctccacaggtcccaccacatcagcctggtcctcctgtagttggtgct
cttcagccgcccactttcacacctcctttgggcattccccctcctggttttggccctggt
gttcctcctccaccacctcctccaccatttttgcgcccaggatttaatccgatgcatttg
ccaccaggttttcttcctcctggacccccacctcctataactccaccagtatccattcct
cctcctcacactccaccaataagcatcccaaactctactatcgctggtataaatgaagac
actacaaaagacttatctattggaaatcccattccaacagtggtgtctggggctagagga
aacgccgagtctggtgacagtgtgaaaatgtatggctctgctgtgccacctgctgcaccc
acgaatctgcccacccctcctgtaacccagcctgtttcacttcttggtactcaaggagtt
gcccctggccctgtaattgggctccaggcaccatccactggtcttcttggagcccgaccc
ggcctgatcccacttcagcgccctccaggaatgcctccgcctcacttacagcgatttccc
ttgatgccacctcgtcccatgccaccacatatgatgcatagaggtccacctccaggacct
gggggctttggaatgcctccacctcacgggatgaaaggcccctttccacctcatggcccc
tttgttaggcctggcggaatgccagggcttgggggcccagggccaggcccagggggtcct
gaagacagagacggaaggcagcaacaagcacagccacagcagccgccaccgccacagcca
cagccgcagcagccgccaccagcgcagcagccaccaccagctcagcagcaaccacagccg
tttagaaatgataacaggcagcagttcaattcaggtagagaccaagagaggtttggaaga
agatcttttggaaatagggtggaaaatgaccgggaacggtatgggaaccgtaatgatgat
agagataatagtaatcgtgaaaggagagagtggggaagaaggagccctgaccgggacagg
cacagagacttggaagagagaaatagacgctctagtgggcatcgagacagagagagagat
tctagagatagagagtctcgtagagaaaaggaagaaaaccgaggaaaggagaagcctgag
gtgacagacagggcaggtggtaacaaaaccattgaacctcccattagccaagtgggaaat
gtagacactgtttcagaacttgataagggggagtctgagtctgcagttgtaaaaccttct
gaagagttacctgctgaggctacctcatccgttgaacccgaaaaggattctggctcagca
gcagaggctcctcgttag
DBGET
integrated database retrieval system
