Nyctereutes procyonoides (raccoon dog): 129503446
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Entry
129503446 CDS
T09008
Name
(RefSeq) sodium- and chloride-dependent betaine transporter
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04082
Neuroactive ligand signaling
npo04721
Synaptic vesicle cycle
npo04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
129503446
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
129503446
04721 Synaptic vesicle cycle
129503446
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npo02000
]
129503446
Transporters [BR:
npo02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
129503446
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
129503446
NCBI-ProteinID:
XP_055171506
LinkDB
All DBs
Position
Unknown
AA seq
614 aa
AA seq
DB search
MDRKVAVPEDGPPVVSWLPEEGEKLDQEGEDQVKDRGQWTNKMEFVLSVAGEIIGLGNVW
RFPYLCYKNGGGAFFIPYFIFFFTCGIPVFFLEVALGQYTSQGSVTAWRKICPLLQGIGL
ASVVIESYLNIYYIIILAWALFYLFSSFTSELPWTTCTNAWNTEYCMDFLNHSGAHTATS
SENFTSPVMEFWERRVLGITSGIHDLGALRWELALCLLLAWLTCYFCIWKGVKTTGKVVY
FTATFPYLMLIILLIRGITLPGAYQGVIYYLKPDLLRLKDPQVWMDAGTQIFFSFAICQG
CLTALGSYNKYHNNCYRDSIALCFLNSATSFAAGFVVFSILGFMAQEQGLPISEVAESGP
GLAFIAFPKAVTMMPLSQLWSCLFFIMLIFLGLDSQFVCVECLVTASMDMFPSQLRKSGR
RELLILAIAVMCYLAGLFLVTEGGMYIFQLFDYYASSGICLLFLAMFEVICISWVYGADR
FYDNIEDMIGYRPWPLVKISWLFLTPGLCLATFLFSLSQYTPLKYNNIYVYPPWGYSIGW
FLALSSMICVPLFVIITLLKTQGSFKKRLRQLTTPDPSLPQPKQHLYLDGGTSQDCGLSP
TKEGLIVGEKETHL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggacagaaaagtggcagtccccgaggacgggcctcccgttgtctcctggctccctgag
gagggagagaagttggaccaggaaggggaggaccaggtgaaggatcggggccaatggacc
aacaagatggagtttgtgctgtcagtggccggggagatcattgggctgggcaatgtctgg
aggtttccctatctctgctacaaaaatggaggtggggccttcttcatcccctacttcatc
ttcttcttcacctgcggcatcccggtgttcttcctggaggtggcgttgggccagtacacc
agccagggcagtgtgacagcctggaggaagatctgcccccttcttcagggcatcggtctg
gcatcggtggtcattgagtcctatctgaacatctactacatcatcatcctcgcctgggct
ctcttctacctgttcagctcctttacctctgagctgccctggacgacctgtaccaacgcc
tggaacacagagtattgcatggactttcttaaccactcgggagcccacacagcgacctcc
tctgagaacttcacctcacctgtcatggaattctgggagagacgtgttttgggcatcacc
tcaggcatccatgatttgggggctctgcgctgggagctagctctgtgcctcctgctggcc
tggctcacctgctacttctgcatctggaagggagtcaagaccacaggcaaggtggtgtat
ttcacagccacgtttccctacctgatgctgatcatcctgctgatccgaggcatcaccctt
cccggagcctaccagggtgtcatctattacctgaagcccgatttgcttcgcctcaaggac
ccccaagtatggatggacgcgggcacccagatcttcttctccttcgccatctgccagggg
tgcctgactgccctgggcagctacaacaagtatcacaacaattgctacagggacagcatc
gccctctgcttcctgaacagtgccaccagcttcgcggctggcttcgtggtcttctccatc
ctgggcttcatggcccaagagcaggggctgcccatctctgaggtggctgagtccggtcct
ggtctagccttcatcgcgttccccaaggctgtgacaatgatgcccttatctcagctgtgg
tcctgccttttcttcatcatgctcatcttccttgggctggacagccagtttgtctgtgtg
gagtgcctggtgacagcctccatggacatgttccccagtcagctccggaagagtgggcgg
cgggagctcctcatccttgccattgctgtcatgtgctacctggcggggctttttctggtc
acggagggcgggatgtatatcttccagctgtttgattattatgcctccagtggcatatgc
ctgctcttcctggcgatgttcgaagtgatctgcatcagctgggtgtacggggctgatcgt
ttctatgacaacattgaagacatgattggctaccggccatggcccttggtgaagatttcc
tggctctttctgacccctggactctgcctggccaccttcctcttctccttgagccagtac
acacctctcaaatacaacaacatctacgtgtaccctccctggggctactccatcggctgg
ttcttggctctctcctccatgatctgcgtcccactctttgtcatcatcactcttctgaag
acccagggttccttcaagaagcgcctacgacagcttaccacccctgaccccagcctgcca
cagcccaagcaacacctgtatctggatggtggtaccagccaggactgcgggctttcccca
acaaaggagggactaatagttggggagaaggagacccacttgtag
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