Nyctereutes procyonoides (raccoon dog): 129503956
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Entry
129503956 CDS
T09008
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129503956 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npo03041
]
129503956 (PRPF8)
Spliceosome [BR:
npo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129503956 (PRPF8)
Complex C
U5 SnRNP specific factors
129503956 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
129503956
NCBI-ProteinID:
XP_055172450
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggctggagtatttccttaccgagggccgggtaacccggtgcccggccctctagcccca
ttgccggactacatgtcggaggagaagctgcaagagaaagcccggaaatggcagcaatta
caggccaagcgctatgcggaaaagcgaaagtttggatttgtggatgctcagaaagaagac
atgcccccagaacacgttaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtttacttgggtgccctgaaatacatgccccatgcagtcctc
aaactactggagaacatgcctatgccttgggagcagattcgggatgtacctgtgctgtac
cacatcactggagccatttcttttgtcaatgagattccctgggtcattgaacctgtctac
atctcccagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacagaaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgcagac
aatatcttggatgttgaaccactggaggccattcagctagagctggaccctgaagaggat
gctcctgtgttggactggttttatgaccaccagccattgagggatagtcggaagtacgtg
aatggttccacttaccagcgctggcagttcacactgcccatgatgtctactctataccgc
ttggccaatcagctcctgacagacttggtagatgataactacttctatctctttgatctg
aaagccttcttcacgtccaaggcactcaatatggccattcctggaggccccaaatttgaa
cctcttgttcgagacatcaacctccaggatgaagactggaatgaattcaacgatatcaac
aagatcatcatccggcagcctatccgcactgaatacaagattgcttttccctatctgtac
aacaaccttccacaccatgtccaccttacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatctcccagctttctactttgatcctttgatcaacccaatttct
cacaggcactctgtcaagagccaggaaccattacctgatgatgacgaggagtttgaactc
ccagagtttgtggagcccttcctgaaggacacacccctctacacagacaatacagccaat
ggcattgccctgctctgggccccaaggcccttcaacctacgctctggtcgtacccgccgg
gccctggacatcccccttgtcaagaactggtatcgggagcattgtcctgctgggcagcct
gtgaaagtgagggtctcctaccagaaactgcttaagtactatgtgctgaatgccctgaag
caccggccccctaaagcccaaaagaagaggtacctgtttcgttccttcaaagctaccaaa
ttctttcagtccacaaagctggactgggtagaggtggggcttcaggtttgccgccagggc
tacaacatgctcaaccttcttattcaccgaaaaaacctcaactatctgcatctggattat
aacttcaatcttaagcctgtcaagaccctcactaccaaggaaagaaagaaatctcgtttt
ggaaatgctttccatctgtgtcgagaagttctgcgtttaaccaagttggtggtggacagt
catgtgcagtatcgcttgggcaatgtggatgccttccagctggcagatgggttgcagtat
atctttgcccatgtggggcaactgacgggcatgtaccggtacaaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaatacgggccct
gtagggaagggccctggctgtggcttctgggctgctggctggcgagtctggctgtttttc
atgcgtggcatcacccctttgctggagcggtggctgggcaacctcctggcccgacagttt
gaaggccgacactccaagggggtggcaaagactgtaacaaagcagcgagtggaatcgcat
tttgacctggagcttcgggcagctgtgatgcatgacattctggacatgatgcctgaggga
atcaaacagaacaaggcccggacgatcctgcagcacctcagtgaagcctggcgctgctgg
aaggccaatattccctggaaggtacctggcctgccaacacccatagagaatatgatcctt
cgatatgtgaaagccaaggctgattggtggaccaacactgcccactataaccgagaacga
atccgccgtggagccactgtggacaagactgtttgcaaaaagaacctggggcgcctcact
cggctctatctcaaggcagaacaggagcgacagcacaactacctgaaggatgggccatac
atcacagcagaggaagcagtggcagtgtataccaccactgtgcattggttggagagccgg
aggttttcacccatcccattccccccactctcctacaagcatgacaccaagttgctcatc
ttggccttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtctcag
agggaagagctaggtctgatcgagcaagcctatgacaatccccatgaggcactgtcacgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctttatagccacctggtgccagtatatgatgtagagccactggagaagatcactgatgcc
tacctggaccagtacctttggtatgaagctgacaagcgccgccttttcccaccctggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aatctgcaagatgtgtgggagacaagtgagggcgagtgcaatgtcatgctggaatcacgc
tttgagaagatgtatgaaaagatcgacttgaccctgcttaataggctactgcgactcatt
gtagaccataacatagctgactacatgacagccaagaacaatgtcgtcatcaactataag
gacatgaaccatacaaattcctacgggatcattagaggcctgcagtttgcctcattcatt
gtgcagtactatggtttggtgatggatttgctggtgttgggactgcaccgggccagtgag
atggctgggccccctcagatgccaaatgactttctcagtttccaggacatagccactgag
gctgcccaccccatccgtctcttctgcagatacatcgatcgcatccatatttttttcagg
ttcacagcagatgaggctcgggacctgatccagcgttacctgacagagcatcctgacccg
aacaatgaaaatatcgttggctataataacaagaagtgctggccccgagatgcgcgcatg
cgcctcatgaaacatgatgtcaacttgggtcgggcagtgttctgggacatcaagaaccgt
ttgccacggtcagtgactacagttcagtgggagaacagtttcgtgtctgtgtacagtaag
gataaccccaatctgctgttcaacatgtgtggctttgagtgccgcatcctacctaaatgc
cgcaccagctatgaggaattcacccacaaggatggggtgtggaacctgcagaatgaggtt
actaaagagcggacagctcagtgtttcctgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgcgtgcgtcaaattctgatggcctctggctctaccaccttcaccaagattgtg
aataagtggaacacagctcttataggccttatgacgtactttcgagaggctgtggtgaac
acccaggagctcctggacttgctagtgaagtgtgagaacaagatccagacacgtatcaag
attggcctcaactccaagatgcccagtcggttccctcccgttgtgttctatacccctaag
gaattgggtggacttggcatgctctcaatgggacatgtgctcattccccagtctgacctc
aggtggtcgaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctgattcccaacttgtaccgctacatacagccatgggagagcgagttcatt
gactctcagcgagtctgggctgagtatgcactgaagagacaagaagccattgctcagaac
agacgactgaccttagaagatctagaagattcatgggatcgtggcattcctcgaatcaac
accctcttccagaaggaccggcacacattggcttatgataagggctggcgtgttcgaact
gactttaagcagtatcaggttttgaagcagaaccctttctggtggacacaccagcggcat
gatgggaagctctggaacctgaacaactaccgtacggacatgatccaggccttgggtggt
gtagaaggcattctggaacacacactcttcaagggcacttacttccctacctgggagggg
cttttctgggaaaaggccagtggttttgaggagtctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccagattcctaatcgtaggttcaccctctggtggtcccca
accatcaaccgggccaatgtgtatgtaggctttcaggtgcagctggacctgacaggtatc
ttcatgcatggcaagattcccacactgaagatctctcttatccagatcttccgagctcac
ttatggcagaagatccatgagagcattgtgatggacttgtgtcaggtgtttgatcaggaa
ctggatgcactagaaattgagacagtacaaaaggagaccattcaccctcggaagtcctat
aagatgaattcttcctgtgcagatatcctgctctttgcctcctataagtggaatgtctct
cggccctcgttgctggcagactccaaggatgtgatggatagtaccactactcagaagtat
tggattgatatccagttgcgctggggggactatgattcccatgacattgaacgctatgcc
cgggccaagttcttggactacaccacagacaacatgagtatctacccttcacccactggt
gtgctcattgccattgacctggcctataacctgcacagtgcctatggaaactggttcccg
ggcagcaagcctctcatacagcaggccatggccaaaatcatgaaggcaaaccctgccttg
tatgtgttacgtgaacggatccgcaaagggctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaattatggggagctcttctccaaccagattatctggtttgtg
gatgacactaatgtctacagagtgactatccataagacctttgaagggaacttgacgacc
aaacccatcaatggggccatcttcatctttaatccacgcacagggcagctgttcctcaag
ataatccacacatccgtgtgggctggacagaagcgtttggggcagctggctaagtggaag
acagctgaggaagtggctgccctgatccgatctctgcctgtagaggagcagcccaagcag
atcattgttactaggaagggcatgctggacccattggaggtgcacttgctggacttcccc
aatattgtgatcaaaggatcagagctccaactacctttccaggcttgtctcaaggtggaa
aagtttggagacctcatccttaaagccactgaaccccagatggttctctttaatctctat
gatgactggctcaagactatctcatcttacacggctttctcccgtctcatcctgattttg
cgtgctcttcatgttaacaatgaccgagcaaaggtgatcctgaagccagacaagactacc
attacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaggtggag
gtgcagctcaaagatcttatcttggccgactatggcaagaaaaacaacgtcaatgtggca
tcactgacacagtcagaaattcgagacatcatcttgggtatggagatttcggcaccatca
cagcagcggcagcagatagcagagattgagaagcagaccaaggaacagtcacagctgaca
gcaacgcagactcgcactgtcaacaagcatggcgatgagatcattacttctaccaccagc
aactatgagacccagactttctcgtctaagactgaatggagggttagggccatctctgct
gccaaccttcacctaaggaccaatcatatctacgtgtcctctgatgacatcaaggagacc
ggttatacctatatccttcctaagaatgtgcttaagaagtttatttgcatatctgacctt
cgggcccaaattgcaggatacctgtatggagtgagtccaccagataacccccaggtgaag
gagatccgctgcattgtgatggtaccacagtggggcactcaccaaactgtgcacctccct
ggccagctgccccagcacgagtacctcaaggagatggaacccttaggatggatccacact
cagcccaacgagtccccccagctatcaccccaagatgtcaccactcatgctaagatcatg
gctgataacccatcctgggatggtgagaagaccattatcatcacctgcagcttcacacca
ggctcctgcacattgacagcctataagctgacccccagtggctatgaatggggtcgccag
aacacagataagggcaacaatcccaagggctatctaccctcacattatgagagggtccag
atgctgctgtcagatcgcttccttggcttttttatggtccctgcccagtcctcatggaac
tacaactttatgggtgtccggcatgatcccaacatgaagtatgagctgcagctggcaaat
cctaaagagttctaccacgaggtccacagaccttcccacttcctcaacttcgctctcttg
caagagggtgaggtctactctgcggaccgagaagacctctatgcctag
DBGET
integrated database retrieval system
