Nyctereutes procyonoides (raccoon dog): 129504270
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Entry
129504270 CDS
T09008
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04140
Autophagy - animal
npo04148
Efferocytosis
npo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129504270 (VPS18)
04148 Efferocytosis
129504270 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129504270 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npo04131
]
129504270 (VPS18)
Membrane trafficking [BR:
npo04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
129504270 (VPS18)
Hops complex
129504270 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
zf-ANAPC11
KNOX2
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
129504270
NCBI-ProteinID:
XP_055172886
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGSESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYADHPPPFREFPSSLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGHLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KPAERTQATLLTTWLTELYLSRLGALQGDPEALNLYRETRERFRSFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLRAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGAVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPAPTKGSARAKEAEAGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgaatacgaggactccctgtcccgctcagccgtcttgcagccg
ggctgccccagcgtgggcatcccccactcggggtatgtgaatgcccagctagagaaggaa
gtgcccatcttcacgaagcagcgcattgactttaccccttctgagcgtattaccagtctt
gtcgtctcttgtaatcagctctgcatgagcctgggcaaggacacactactccgcattgac
ttgggcaaggcaaacgaacccaaccacgtggagctggggcgcaaggatgatgccaaggtt
cacaagatgtttctggaccacactggctctcacctgctgattgctctgagcagcactgag
gtcctctatgtgaaccgtaatggacagaaggtacggccactggcacggtggaaggggcag
ctggtggagagtgtgggctggaacaaggcactgggcagtgagagcagcacaggccccatc
ctggtcggcactgcccaaggccagatcttcgaagcagagctctccgccagtgagggtggg
ctttttggccctgccccagatctctacttccgcccattgtatgttctaaatgaagaaggg
ggtccagcacctgtgtgctcccttgaggccgagcgaggccctgatgggcgtggcttcgtg
atcgccaccaccaggcagcgcctcttccagttcataggccgagcagctgagggagctgag
gcccagggcttctcggggctctttgctgcctacgctgaccacccacccccattccgtgag
ttccccagcagtctgggctacagcgagttggccttctatacccccaaactgcgttctgca
cctcgggcctttgcctggatgatgggggacggcgtgttgtatggagcattggactgtggg
cgccccgattccctgctgagcgaggagcgtgtctgggagtacccagagggggtaggtcct
ggggccagcccacccctggccatcgtcctgacccagttccacttcctgctgctgctggct
gaccgagtagaggcagtgtgcaccctgacggggcaggtggtgctgcgggatcacttcctg
gagaagtttgggccactgaagcacatggtgaaggactcttccacaggccacctgtgggcc
tacactgagcgagccgtcttccgctaccacgtacagcgggaggcccgagatgtctggcgc
acctacctggacatgaaccgctttgacctggccaaagagtattgccgagagcggcctgac
tgcctggacactgtcctggcccgagaggccgatttctgttttcgtcaacgccgttacctg
gagagcgcccgctgctatgccctgactcagagctactttgaggaaatcgccctcaagttc
ttggaggcccgacaggaggaggctctagctgagttcctacagcgaaaactggccagtttg
aagcctgctgagcgaacccaggccacgctgcttaccacctggctgacagagctttacctg
agccggctaggagcactacagggtgatcctgaggccctgaacttataccgggaaacacgg
gagcgcttccggtccttcctcagcagtccccgccacaaagagtggctctttgccagccgg
gcctccatccacgaactgctggccagccacggggacacggaacatatggtgtactttgcc
gtgatcatgcaggactatgagcgggtggtggcataccattgccagcatgaggcctacgag
gaagccctggctgtgcttgctcgccaccgtgacccccagctcttctataagttctcaccc
atcctcatccgtcacattcctcgccagctggtagatgcttggattgagctgggcagccgc
ctggatgctcggcagctcatccctgccctggtgaactacagccagggtggtgaggcccag
caggtgagccaggccatccgctacatggagttctgcgtgaatgtgctgggcgagactgag
caggctattcacaattacctgctgtcgctctatgcccgaggccagcctgcctcactgctg
gcctaccttgagcaggcaggggccagcccacaccgtgtgcattacgacctcaagtatgcg
ctgcggctttgtgctgagcacggccaccaccgtgcttgtgtccacgtctacaaggtccta
gagctgtatgaggaggccgtggacttggccctgcaggtggatgtggacctggccaaacag
tgtgccgacttgcctgaggaggacgaggaactgcgtaagaaactgtggctgaagattgct
cggcacgtggtgcaagaggaggaagatgtgcagacagccatggcctgcctggccagctgc
cccctgctcaagattgaggatgtgctgcccttctttcctgacttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcgcttagggcctacaaccaccacatccaagagctgcag
cgggagatggaggaggccacagccagtgcccagcgcatccggcgagacctacaggaactg
cggggccggtacggggcagtggagccccaggacaagtgcgccacctgcgacttccccctg
ctcaaccggcctttttaccttttcctctgtggccacatgttccatgctgactgcctgctg
caggctgtgcggccgggcctgcccgcctacaagcaggcccggctggaggagctgcagcgg
aagctgggagctgctccggcccctaccaagggctccgcccgtgccaaggaggccgaggca
ggggcagccacagcggggcccagtcgggagcagcttaaggccgacctggatgaactggtg
gcggccgagtgcgtgtactgtggggagctgatgatccgctccattgaccggcccttcatt
gacccccagcgctatgaggaggagcacctcagttggctgtag
DBGET
integrated database retrieval system
