Nyctereutes procyonoides (raccoon dog): 129504419
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Entry
129504419 CDS
T09008
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03015
mRNA surveillance pathway
npo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129504419 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
129504419 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129504419 (PABPC4L)
03041 Spliceosome [BR:
npo03041
]
129504419 (PABPC4L)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
129504419 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
129504419 (PABPC4L)
Spliceosome [BR:
npo03041
]
Complex C
Other components
Complex C specific factors
129504419 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_MARF1
RRM_RdRP1_2
RBD_RDR6
RRM_7
RBD_DEAH11
RRM_10
RRM_Nup35
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
129504419
NCBI-ProteinID:
XP_055173092
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MTVAAKYRQASLYVGDLDAEVTEDALFRKFSAAGPVLSIRICRDPLTRRPLGYAYVNFLR
LADAQRALDTMNFDVLQGRPLRLMWSQRDAQLRRSGVGNVFIKNLDRSVDDKALFERFSA
FGKILSSKVMSDERGSRGYAFVHFQEPSAADRAIERMNGAQLRGCRLFVGRFQSRQAREA
ELRGRAGQFTNLYIKNLGGRTDDARLGAVFGAYGKTLSVKVMTDASGRSRGFGFVSFESH
EAARRAVEALNGRQLDGRPLFVGRAQPKAERRAELRRAFEQRRQDGLRGAPGAELYVKNL
DDAVDEDGLRREFARFGAVCRVKVMREEGRSKGFGLICFSSAEEAARALAGMNGRVLGSK
PLSVALAQRP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggccgccaagtaccgccaggcgtccctgtacgtgggggacctcgacgccgag
gtcaccgaggacgcgctgttcaggaagttcagcgccgcggggcccgtgctgtccatccgc
atctgcagggacccgctgacccgccgcccgctgggctacgcctacgtgaacttcctgcgg
ctggcggacgcgcagcgggccctggacaccatgaacttcgacgtgctgcagggccggccc
ctccggctcatgtggtcgcagcgcgacgcgcagctgcggagatcgggcgtcggcaacgtg
ttcatcaagaacctggaccgctccgtggacgacaaggccctgttcgagcgcttctcggcg
ttcgggaagatcctgtcgtccaaggtgatgagcgacgagcgcggctcccgcggctacgcg
ttcgtgcacttccaggagccgagcgccgccgaccgcgccatcgagcgcatgaacggggcg
cagctgcgcggctgcaggctcttcgtgggccgcttccagagccgccaggcccgcgaggcc
gagctgcgcggccgcgccggccagttcaccaacctgtacatcaagaacttgggcggccgc
acggacgacgccaggctcggggccgtgttcggcgcgtacggcaagaccctgagcgtcaag
gtgatgacggacgccagcggccggtcccgcggcttcggcttcgtgagcttcgagagccac
gaggcggccaggagggcggtggaggccctcaacggccggcagctggacgggcggccgctg
ttcgtgggccgcgcgcagccgaaggcggagcggcgggcggagctcaggcgggcgttcgag
cagcggaggcaggacgggctccgcggggccccgggcgccgagctctacgtcaagaacctg
gacgacgccgtcgacgaggacgggctgcgcagggagttcgctcgcttcggcgccgtctgc
agggtcaaggtcatgcgggaggaagggcgcagcaaaggcttcggcctcatctgcttctcc
tctgccgaggaggccgccagggccttggccgggatgaacggccgcgtgctgggctccaag
ccgctgtcggtcgccctggcccagaggccctag
DBGET
integrated database retrieval system
