Nyctereutes procyonoides (raccoon dog): 129506078
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Entry
129506078 CDS
T09008
Symbol
TNR
Name
(RefSeq) tenascin-R
KO
K06252
tenascin
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04151
PI3K-Akt signaling pathway
npo04510
Focal adhesion
npo04512
ECM-receptor interaction
npo04518
Integrin signaling
npo05165
Human papillomavirus infection
npo05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129506078 (TNR)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129506078 (TNR)
04518 Integrin signaling
129506078 (TNR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129506078 (TNR)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
129506078 (TNR)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129506078 (TNR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npo00536
]
129506078 (TNR)
Glycosaminoglycan binding proteins [BR:
npo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129506078 (TNR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
Fibrinogen_C
EGF_TEN
EGF_Teneurin
FN3_DSCAM-DSCAML_C
EGF_Tenascin
Fn3_Dep-1_3rd
Fn3_PBP1
Pur_ac_phosph_N
EGF_2
Fn3_VIN3
FN3_Tor_3rd
DUF7949
SPE9_EGF_3rd
Motif
Other DBs
NCBI-GeneID:
129506078
NCBI-ProteinID:
XP_055175522
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MGVDGETVVLKNMLIGVNLILLGSLLKPSECQLEVTTERVQGQAVEEEGGAASYNASGKE
QPMVFNHVYNINVPLDSLCSSGLEASAEQDVSTEDEPLAQYTGQTSDRESQVTFTHKINL
PKKACPCAGSARVLQELLNRIEMLEREVSLLRDQCTTNCCPESAATGQLDYIPHCSGHGN
FSLQSCGCICNEGWFGKNCSEPYCPLGCSSRGVCVDGQCVCDSEYSGGDCSELRCPTDCS
SRGLCVDGECVCEEPYTGEDCSELRCPGDCSGQGRCANGTCFCQEGYMGEDCSQRQCLNA
CSGRGHCQEGLCFCEDGYLGPDCSAVAPPEDLRVAGISDRSIELEWDRPMAVTEYVISYQ
PMALGGLQLQQRVPGDWSGVTITELEPGLTYNISVYAVISNILSLPITAKVATHLSTPQG
LHFKTITETTVEVQWEPFSFSFDGWEISFIPKNNEGGVIAQLPSDVTSFNQTGLKPGEEY
IVNVVALKEQARSLPTSASVSTVIDGPTQILVRDVSDTVAFVEWTPPRAKVDFILLKYGL
VGGEGGKTTFRLQPPLSQYSVQALRPGSRYEVWVSAVRGANESQSTTTQFTTEIDAPKNL
RVGSHTATSLDLEWDNSEAEVQEYKVVYSTLAGEQYHELLVPKSVGPTTRATLTDLVPGT
EYGVGISAVMNSQQSVPATMNARTELDSPRDLMVTASSETSISLIWTKASGPIDHYRITF
TPSSGIASEVTVPKDRTSYTLTDLEPGAEYIISITAERGRQQSFESTVDAFTGFRPISHL
HFSHVTSSSVNITWSDPSPPADRLILNYSPRDEEEEMTEVSLDATKRHTVLMGLQPATEY
IVNLVAVHGTVTSEPIVGSITTGIDPPKDITISNVTKDSVMVSWSPPVAPFDYYRVSYRP
TQVGRLDSSVVPNTVTEFTITKLYPATEYEISLNSVRGREESERICTLIHTAMDNPVDLT
ATNITPTEALLQWKAPVGEVENYVIILTHFAVAGETILVDGGSEEFQLVGLLPSTHYTVS
MYAASGPLTSGTISTNFSTLLDPPANLTASEVTRQSALISWQPPRAEIENYILTYKSTDG
SRKELIVDAEDTWIRLEGLSESTDYTVLLQAAQDTARSSLTSATFTTGGRVFPHPQDCAQ
HLMNGDTLSGVYTIFLNGELSRKLQVYCDMTTDGGGWIVFQRRQNGQTDFFRKWAEYRVG
FGNLEDEFWLGLDNIHRITSQGRYELRVDMRDGQEAAFAYYDKFSVEDARSLYKLRLGGY
NGTAGDSLSYHQGRPFSTEDRDNDVAVTNCAMSYKGAWWYKNCHRTNLNGKYGESRHSQG
INWYHWKGHEFSIPFVEMKMRPYNHRLPAGRKRRSLQF
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgggggtggacggggaaacggtggtcctgaagaacatgctcattggcgtcaaccttatc
ctcctgggctccctgctcaagccctccgagtgtcagctggaggtcaccaccgaaagggtc
cagggacaggcggtggaggaggaaggaggggcggccagctacaacgcctcgggcaaagag
cagccgatggtcttcaaccacgtgtacaacatcaacgtgcccctggacagcctctgctcc
tcggggctggaggcctcggccgagcaggacgtgagcaccgaagacgagccgctggcgcag
tacacgggccagacgtccgaccgcgagagccaggtcaccttcacccacaagatcaacctc
cccaaaaaggcctgcccgtgcgccggctcggcccgggtgctgcaggagctgctgaatcgg
atcgagatgctggagagggaggtgtcgctgctgcgggaccagtgcaccaccaactgctgc
ccagaaagcgccgccacaggacaactggactacatccctcactgtagtggccacggcaac
tttagcctccagtcctgcggctgcatctgcaatgaaggctggttcggcaagaactgctcc
gagccctactgcccgctgggctgctccagccggggcgtatgtgtggacggccagtgcgtc
tgtgacagcgagtacagcgggggcgactgctctgagctccggtgcccgacagactgcagc
tcccgggggctctgcgtagatggagagtgtgtctgtgaagagccctacacaggcgaggac
tgcagtgagctgaggtgccccggggactgttcggggcaggggagatgcgccaatggcacc
tgcttctgccaggagggctacatgggggaggactgcagtcaacggcagtgtctgaacgcc
tgcagcgggcgaggtcactgccaggaggggctttgcttctgtgaagacggctacctgggc
cctgactgttcggcagttgcccctccagaggacttgcgagtggctggtatcagcgacagg
tccattgagctggaatgggacaggccgatggcagtgacggaatatgtgatctcttaccag
ccgatggccctggggggcctccagctccagcagcgggtacctggagattggagtggtgtc
accatcacggagctggagccaggtctcacctacaacatcagcgtctacgctgtcattagc
aacatcctcagccttcccatcactgccaaggtggccacccatctctccactcctcaaggg
ctacacttcaagacgatcacagagactaccgtggaagtgcagtgggagcccttttcattc
tcctttgatgggtgggagatcagcttcattccaaagaataatgaaggaggggtgattgct
cagctccccagtgatgttacatccttcaatcagacaggactaaagcctggggaggaatac
attgtcaatgtggtggctctgaaagagcaagcccggagcctccctacctcggccagcgtc
tctactgtcattgatggacctacacagatcctggttcgagatgtctcagacactgtggcc
ttcgtggagtggaccccacctcgagccaaagtcgatttcattctcttgaagtacggcttg
gtgggtggggaaggcgggaagaccaccttccggctacagcctcccctgagtcaatactca
gtgcaggccctacggccagggtcccgctatgaggtgtgggtcagcgctgtccgtggtgcc
aacgagagccagtccacgaccacccagttcaccacagagattgatgcccccaagaacctg
agagtgggctcccacacggcaaccagccttgacctcgagtgggacaacagcgaagcagag
gtccaggagtacaaagttgtgtatagcaccctggcgggtgagcagtaccacgagctgctt
gtccccaagagcgtgggtcccaccacccgagccacactcacagatctggtgcctggcacg
gagtatggagttggaatatctgctgtcatgaactcacagcaaagtgtgccagccaccatg
aatgccaggactgaacttgacagtccccgggacctcatggtgactgcctcctcggaaacc
tccatctccctcatctggaccaaggccagtggccccattgatcactaccgaattaccttt
accccatcctccgggatcgcctcagaagtcactgtgcccaaggacaggacctcatacaca
ttgacagatctggagcctggagcagaatacatcatttcaatcactgctgagaggggtcgg
cagcaaagtttcgagtccactgtggatgccttcacaggcttccgccccatctcccatttg
cacttttctcacgtgacctcctccagtgtaaacataacctggagtgacccatcccctcca
gcagacagactcattctgaactacagccctcgcgatgaagaggaagagatgacagaggtc
tctctggatgctaccaagaggcatactgtcctgatgggtctgcagccagctactgagtac
attgtgaacctggtagcagtccacggaacagtgacctctgagcccatcgtgggctccatc
accacaggaattgatcctcccaaagacatcacaattagcaatgtgacgaaggactcagtt
atggtctcctggagccctcctgttgcaccttttgattactaccgagtatcatatcggcca
acacaagttggacgactggacagttcagtggtgcccaacacagtgacggaattcaccatt
accaaactgtatccagccactgagtatgaaatcagtctcaacagtgtacggggcagggag
gagagtgagcgcatctgtaccctcattcacacagccatggacaaccctgtggatctgact
gctaccaacattactccaacagaagccctgctgcagtggaaggcaccagtgggtgaagtg
gagaactatgtcattattctcacacactttgcagttgctggggagaccatcctggttgat
ggcggcagtgaggaattccagcttgttggcctgcttcctagcacccactatactgtcagc
atgtatgccgccagtgggcctctcaccagtggtaccatcagcaccaacttctctaccctc
ctggaccctcctgcaaacctgacagccagtgaagtcaccagacaaagtgccctgatctcc
tggcagcctcccagagcagagattgaaaactacatcttaacttacaaatccactgatgga
agccgcaaggagctgattgtggatgcagaggacacgtggatccgattggagggcctgtct
gagagcacggattacacagtgctcctgcaggcagcgcaggacaccgcccggagcagcctc
acctctgccaccttcaccacagggggccgagtgtttcctcatcctcaagactgtgcccag
catttgatgaatggagacactctgagtggggtttacaccatttttctcaatggagagcta
agccggaagttacaggtgtactgcgacatgaccacggatgggggtggatggattgtgttc
cagagacgacagaatggccaaactgactttttccggaaatgggctgagtaccgtgttggc
ttcgggaacctggaggatgagttttggctggggctggacaacatacacaggatcacatcc
cagggccgctacgagctgcgcgtggacatgcgggacggccaggaggctgccttcgcctac
tacgacaagttctccgtggaggatgctagaagcctgtacaagctgcgtctaggaggctac
aatggcactgcaggggactccctcagctatcatcaggggcgccctttctccacagaggac
agagacaatgatgttgctgttaccaactgcgccatgtcttacaagggggcctggtggtac
aagaactgccaccggaccaacctcaatgggaaatatggagagtccaggcacagtcagggg
atcaactggtaccactggaaaggccacgagttctccatccctttcgtggagatgaagatg
cgcccctataatcaccgtctcccagcggggcggaaacggcggtccttgcagttctga
DBGET
integrated database retrieval system