Nyctereutes procyonoides (raccoon dog): 129506255
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Entry
129506255 CDS
T09008
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
npo00535
]
129506255 (CSPG4)
04091 Lectins [BR:
npo04091
]
129506255 (CSPG4)
Proteoglycans [BR:
npo00535
]
Cell surface proteoglycans
Others
129506255 (CSPG4)
Lectins [BR:
npo04091
]
C-Type lectins
Others
129506255 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
129506255
NCBI-ProteinID:
XP_055175764
LinkDB
All DBs
Position
Unknown
AA seq
2307 aa
AA seq
DB search
MRGQPPAPPGPALPLALALALWAGASSAASFFGENHLQVPVTTALSNIDLRLQFSTSQPE
ALLLLAAGQADHLLLQLHSGYLQVRLTLGQEELRLQTPAETPLSDSAIHSVELTVSDSEA
SLSVDGLLNASAPVLGAPLEVPYGIFLGGTGSLNLSYLMGASRPLRGCLHTATVNGRNLL
RPLTPDVHEGCAEEFSADDSVALGFSGPHSLAAFPAWNTREEGTLAFILTTRSRQAPLAF
QAGGRHGDFIYVDIFEGHLRAVVEKGQGTVLLHNSVPVADGLPHEVSVHVDAHQLEISVD
QYPTRTSNRGILSYLEPRGSLLLGGLDTEASRHLQEHRLGLASGAVNVSLLGCMEDLSIN
GQRQGLREASLTRSMVAGCSLEEDEYEEDTYGTYEALSTLAPEAWSAVELPEPCVPEPGL
PPVFANFTQLLTVSPLVVAEGGTAWLEWRHLQPTLDLSEAELRKSQVLFSVSRGARHGEL
ELDVPGAQARKMFTLLDVVNRKARFVHDGSEETSDQLMLEVSVTARGPVPSCLRRGQTYI
LPIQINPVNDPPQIIFPHGSLMVILEHTQKPLGPEVFQAYDPDSACEGLTFQLLGTAPGL
PVERQEQPGEPATEFSCRELEAGGLVYVHRSGPAQDLTFRVSDGLQASAPATLQVVAVRP
SIRVRHNTGLRLAQGSAAPVLPANLSVETNAVGQDVSVLFRVAAALRFGELQKQGAGGAE
GAEWRPVQAFQQRDVEQGRVRYLSTDPQHRTEDAVERVALEVQVGQETLSNLSFLVTIQR
ATVRLLRLEPLRTHTTQQEALTGAHLEAALEEGAGPSPTTFHYELVQAPRKGNLRLQGAR
LSEGQGFTQDDLQAGRVTYGATARTSETVEDAFRFRVTAPPHFSPLYTFPVHIGGDPDAP
VLTNVLLSVPEGGEGVLSAEHLFVKSLNSASYLYEVMERPRHGRLVWRGAQDEATAVTSF
TNEDLLQGRLVYQHDNSETTEDDIPFVATRQSEGSGGLAWEEVRGVFRVAIQPVNDHAPV
QTISRVFHVARGGRRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAADEPTRPIYR
FSQEDLRKRRVLFVHSGADRGWIQLQVSDGQHQATALLEVQASEPYLRVANGSSLVVPQG
GQGTIDTAVLRLDTNLDIRSGDEVRYRVTVGPHWGQLLRAGQPATAFSQQDLLDGAVLYS
HNGSLSPQDTLAFSVEAGPVLTDATLQVTIALEGPLAPLHLVQNKKIYVFQGEAAEIRKD
QLEAAQEAVPPTQIVFSVKTPPRAGYLVMLSRGASVAGPPSWDPVQSFSQEAVDAGRVLY
LHSRPEAWSDAFSLDVGSGLGAPLEGVRVELEVLPTTIPLEAQNFSVPEGGSRALAPPLL
RVAGPYFPALPGLELLVLEPPLHGALRREEAPQAGTLSAFSWKEVEQQQIRYVHDGSETL
TDSFTLVANASELDRQSHPVAFTITVLPINDQPPILTANTGLTMWEGATVPFPPEALRGA
DSDSGPEDLVYTIEPPSNGQVVLRAVPGTEVHSFTQAQLDDGLVLFSHRGALDGGFHFSL
SDGEHTSSGHFFRVTAQKQLLLSLEGSRMLTVCPGSVQPLSSQSLRASSSAGTDPQHLLY
RVVQGPRLGRLLRAQQGSTGEVLVNFTQAEVYAGDVVYEHKMPAEPFWEVHDALELRLSS
PPAPDVAATLEVAVSFEAACPQRPSRLWRNEGLWVAEGQQADITSAALDASNLLARVPPA
LRARHDVLFQVTRFPARGRLLLAGRALHAGRPHFLQSELAAGRLAYAHGGGGAQPDGFGF
RAQLQGPADAGPGALPALPALPDEAFAVRVGAAAAEPLRLPRGSRAPVSRAQLRVQLPGA
APADVQYEVRRAAPGGFLSLAGAGAGPVRRFSQADVDAGRLAFVANGSSVAGVLQLSAWA
GASPRVPVALAVDVLPAAIEVQLRAPLEVPQALGRCALGPRQLRVVSDRAEPEAAYRVTR
APRFGQLLVAGRPAGAFSQRQVDRGDVEFAFTDLSSPRDRFAVLAHARGANASATVDVTV
AALLRVGPRGPWPQGATLRLDPAVLDAAELANRTGGEPRFRLLAGPRLGRLVRVARAGPE
PVEQFTQRDLEGGRLGLQLGRAPGPTGDSLTLELWAPGVPPAVASLDFHTEPYDAARPYG
VALLSLPEEAGGPDSGAAATGQPGAPGPSPGPTAASGGFLGLLEANMFSIIIPVCLVLLL
LALLLPLLFYLRKRNKTGKHDVQVLTAKPRNGLAGDTETFRKVEPGHAIPLTAVPGQGPP
PGGQPDPELLQYCRTPNPALKNGQYWV
NT seq
6924 nt
NT seq
+upstream
nt +downstream
nt
atgcggggtcagccgcctgcgcccccgggccccgcgctgcccctggccttggccttggct
ctgtgggccggcgcctcctctgcggcctccttctttggggagaaccacctgcaggtgccg
gtgaccacagctctgagcaacatagacctccggctacaattctccacgtcccagcctgaa
gccctgctcctcctggcagcaggccaagctgaccacctcctcctgcagcttcactccgga
tacctgcaggtcagactcaccctgggccaggaggagctgaggctgcagaccccagctgag
actccgctgagcgactccgccatccactccgtggagctgactgtgtcagacagcgaggcc
tcgttgtccgtcgatgggcttctgaacgcctcagcccccgtcctgggagctcccctggag
gtcccctatgggatcttcctggggggcactgggagcctgaacctgtcctacctgatggga
gccagccggcccctcaggggctgcctgcacaccgccaccgtcaacggccgcaacctcctc
cgaccactgacccctgacgtgcacgagggctgcgctgaagagttttctgctgatgacagc
gtggctctgggcttctctgggccccactcgctggctgccttccctgcctggaacactcgg
gaggagggcaccctggcgttcatactcaccactcggagccgacaggcacccctggctttc
caggccgggggccggcacggggatttcatctacgtggacatatttgagggccacctgcgg
gctgtggtggagaagggccagggcaccgtgttgctccacaacagtgtgcccgtggccgac
gggctaccccatgaggtcagtgtccacgtggatgctcaccagctggaaatctccgtggac
cagtaccccacacggacttccaaccgtgggatcctcagctacctggaaccccgcggcagt
ctcctcctgggggggctggacacagaggcttcccgccaccttcaggaacaccgcctgggc
ctggcctcaggggccgtcaacgtctccctcctgggctgcatggaggacctcagcatcaac
ggccagaggcaggggctccgggaagcctcgctgactcgcagcatggtggccggctgcagc
ctggaggaagacgagtacgaggaggacacctacggcacctatgaagctctctccaccctg
gcaccggaggcctggtctgccgtggagctgcccgagccctgtgtgcccgaaccagggctg
cctcccgtctttgccaacttcacccaactgctgaccgtcagcccgctggtggtggccgag
gggggcacagcctggcttgagtggcggcacctccagcccacgctggacctgagcgaggcc
gagctgcgtaaatcccaggtgctgttcagcgtgagccgtggggcccgccacggggagctt
gagctggacgtcccgggagcccaggcacggaaaatgttcaccctcctggacgtggtgaac
cgcaaggcccgcttcgtccacgatggctcagaggagacctccgaccagctgatgctggag
gtgtccgtgaccgccaggggccctgtgccctcctgcctccggaggggccagacttacatc
ctgcccatccagataaacccggtcaatgacccaccccaaatcatcttcccccacggcagc
ctcatggtgatcctggaacacacacagaagcccctggggcccgaggtcttccaggcctac
gacccagactctgcctgcgagggcctcaccttccagctccttggcaccgccccgggcctc
ccggtggagcgccaggagcagcccggggagccagccaccgagttctcctgccgggagctg
gaggcgggcggcctggtctacgtgcaccggagcgggcccgcccaggacctgacgttccgc
gtcagcgacgggctgcaggccagcgctccggccacgctgcaggtggtggcggtccggccc
agcatccgggtccgccacaacacggggctgcgcctggcccagggctccgccgcccccgtg
ctgcccgccaatctgtcggtggagaccaacgcggtggggcaggatgtgagtgtgctgttc
cgagtcgctgcggccctgcggttcggggagctgcagaagcagggtgcagggggtgctgag
ggcgcggagtggcgcccggtgcaggccttccagcagcgggacgtggagcagggccgcgtg
aggtacctgagcaccgacccgcagcaccgcacggaggacgctgtggagcgcgtggccctg
gaggttcaggtgggccaggagaccctgagcaatctgtccttcctggtgacgatccagaga
gccaccgtgcggctgttgcggcttgagcccctgcgcacccacaccacccagcaggaggcg
ctcaccggcgcgcacctggaggccgctctggaggagggggcgggccccagccccaccacc
ttccactacgagctggttcaggcccccaggaagggtaacctcaggctgcagggcgcccgg
ctgtccgaggggcagggctttacccaggatgacctgcaggccggccgggtgacctatggg
gccacggcacgcacctcggagaccgtggaggacgccttccgtttccgcgtcaccgctccg
ccacatttctccccgctctacaccttccctgtccacatcgggggtgaccccgacgccccc
gtcctcaccaacgtcctcctctctgtgcccgagggaggcgagggcgtcctctccgcagaa
cacctgttcgtcaagagcctcaacagcgccagctacctctatgaggtcatggagcggccc
cgccacgggcggctggtctggaggggggcgcaggacgaggccaccgcggtgacatccttc
accaatgaggacctgctgcaaggccggctggtctaccagcatgacaactccgagaccacg
gaagacgacatccccttcgtggcaacccgccagagtgagggcagcggcggcctggcctgg
gaggaggtccggggcgtcttccgcgtggccatccagcccgtgaacgaccacgctcccgtg
cagaccatcagccgcgtcttccacgtggcccggggcgggcggcggctactgacgacagat
gacgtggccttcagtgacgccgactccggcttcgccgacgcgcagctggtgctgacccgc
aaggaccttctcttcggcagcatcgtggccgcggacgagcccacgcggcccatctaccgc
ttctcccaggaggacctccggaagaggcgcgtcctgttcgtgcactccggggccgaccgc
ggctggatccagctgcaggtgtccgacgggcagcaccaggccaccgcgctgcttgaagtg
caggcatccgagccctatctccgtgtggccaatggctccagcctcgtggtccctcagggg
ggccagggcaccatcgacacagccgtgctccgcctggacaccaacctagacatccgcagt
ggggatgaggtccgctaccgtgtcacagtcggcccacactgggggcagctgctccgggcc
ggccagccggccacagccttctcccaacaggacctgctggacggggccgtcctctacagc
cacaacggcagcctgagcccgcaggacaccctggccttctccgtggaggcagggcctgtg
ctcacggatgccaccctgcaggtgaccattgccttggaggggccattggccccactgcat
ctggtccagaacaagaagatctacgtcttccagggggaggcagctgagatcagaaaggat
cagctggaggcagcgcaggaggcagtgccgcccacccaaattgtgttctcggtgaagacc
ccgccacgggccggctacctggtgatgctgtcccgcggcgcctccgtggccgggccgccc
agctgggaccccgtgcagagcttctcccaggaggcggtggacgccggcagggtcctgtac
ctccactcccgccccgaggcctggagtgacgccttctccctagacgtgggctcaggcctg
ggtgcgccccttgagggtgtccgcgtggagctggaggtgctgcccaccaccatcccactg
gaggcacagaacttcagtgtccccgagggtggcagccgcgcgctggcccccccgctgctc
cgcgtcgccgggccctacttccctgcgctgcccggcctcgagctgttggtccttgagccg
cccctgcatggggccctgcggagagaggaggcccctcaagcggggaccctcagcgctttc
tcctggaaagaggtagaacagcagcagatccgctatgtgcacgacgggagtgagacgctg
acagacagcttcaccctagtggctaacgcctccgagctggaccgccagagccaccctgtg
gctttcaccatcaccgtcctgcccatcaatgaccaaccgcccatcctcaccgcaaacaca
ggcctaacgatgtgggagggggccaccgtgcccttccctccggaggccctgaggggtgca
gatagcgactcgggcccggaggacctggtctacaccatcgagccacccagcaatgggcag
gtggtgctgcgggcagtgccaggcactgaggtgcacagcttcacgcaggcccagctggac
gacgggctcgtgctgttctcacacagaggagccctggatggaggcttccacttcagcctg
tccgacggcgagcacacttcctccggacacttcttccgcgtgacggcccagaagcagctg
ctcctctccctggagggcagccggatgctgactgtgtgcccagggtcggtccagccgctc
agcagccagagcctgagagccagctccagtgccggcaccgatccgcagcacctgctctac
agggtggtgcagggcccccggctgggccgcctgctccgcgcccagcagggcagcaccggg
gaggtcctggtgaacttcacgcaagccgaggtatacgcgggggatgttgtgtatgagcac
aagatgcctgctgagcccttctgggaggtccacgacgccctggagctccggctgtcctcg
ccccccgcccccgacgtggccgccaccctggaggtggccgtgtccttcgaggccgcctgc
ccgcagcgccccagccgcctctggaggaacgagggtctctgggtggccgagggccagcag
gcggacatcaccagcgccgccctggacgcctccaacctgctggcccgcgtcccccccgcg
ctgcgcgcccggcacgacgtgctgttccaggtgacgcggttcccggcgcggggccggctg
ctgctggcggggcgggcgctgcacgcgggccggccgcacttcctgcagtcggagctggcg
gcggggcgcctggcctacgcgcacggcggcgggggcgcgcagcccgacggcttcggcttc
cgcgcgcagctgcagggccccgcggacgccgggccgggcgcgctccccgcgctccccgcg
ctccccgacgaggccttcgccgtgcgcgtgggggccgcggcggccgagccgctgcgcctg
ccccgcggctcccgcgcgcccgtgtcccgcgcgcagctccgcgtgcagctcccgggcgcc
gcgcccgccgacgtgcagtacgaggtgcggcgcgcggcccccggcggcttcctgagcctc
gcgggcgcgggcgcgggcccggtgcgccgcttctcgcaggccgacgtggacgcgggccgc
ctggccttcgtggccaacggcagcagcgtggcgggcgtgctgcagctgagcgcgtgggcc
ggcgccagcccgcgcgtgcccgtggcgctggccgtggacgtgctgcccgccgccatcgag
gtgcagctgcgcgcgcccctggaggtgccgcaggcgctggggcgctgcgcgctcgggccg
cggcagctgcgcgtcgtgtcggaccgcgccgagcccgaggccgcctaccgcgtgacccgg
gcgccgcgcttcgggcagctcctggtggccggcaggccggccggcgccttcagccagcgg
caggtggaccgcggcgacgtggagttcgccttcaccgacctgtcctccccgcgcgaccgc
ttcgccgtcctggcccacgcgcggggcgccaacgcctcggccacggtggacgtcacggtc
gcggcgctgctgcgggtcgggccccgggggccgtggccgcagggcgccaccctgcgcctg
gacccggccgtcctggacgccgccgagctggccaaccgcacgggcggagagccgcgcttc
cgcctgctggccgggccccggctgggccgcctggtgcgcgtggcccgcgcggggccggag
cccgtggagcagttcacgcagcgggacctggagggcgggaggctggggctgcagctgggc
cgcgcccccggccccacgggcgacagcctcacgctggagctgtgggcgcccggcgtcccc
ccggccgtggcctccctggacttccacaccgagccctacgacgcagcccgaccctacggc
gtggccctgctcagcctccccgaggaagccgggggacccgacagcggcgccgctgccacg
ggccagccgggcgcacccggccccagccctggacccaccgcggccagcggcggcttcctg
ggcctcctggaggccaacatgttcagcatcatcatccccgtgtgcctggtcctcctgctc
ctggccctgctcctgccgctgctcttctacctgcgcaagcggaacaagacgggcaagcac
gacgtccaggtgctgaccgccaagccccgcaacggcctggccggcgacaccgagaccttc
cgtaaggtggagccgggccacgccatcccgctcacggccgtgcccggccaggggcccccg
ccaggcggccagcctgacccagagctgctgcagtactgtcggacacccaaccccgccctc
aaaaacggccagtactgggtgtga
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