Nyctereutes procyonoides (raccoon dog): 129506363
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Entry
129506363 CDS
T09008
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX18-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npo03041
]
129506363
03009 Ribosome biogenesis [BR:
npo03009
]
129506363
Enzymes [BR:
npo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129506363
Spliceosome [BR:
npo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129506363
Ribosome biogenesis [BR:
npo03009
]
Eukaryotic type
90S particles
Helicases
129506363
Pre-60S particles
129506363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
129506363
NCBI-ProteinID:
XP_055176007
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MSHLPMKLLHKKIEKQNLKLHLRHLKLQGASDVSLSETQNGDVSEETVGGGKVKKSLKQS
LNMGSSEAQNGEVAKETVETVQIRKKERKSTIIINGEAATQPPDSESKKKKKKKRKMVDD
TGPDXKKSKTEDKGDSEEGTQAPEETENNEEKPDDEEEDSEVPSLPLGLTGAFEDTSFAS
LSDLVNENTLKAIKELAFTNMTEIQHKSIRPLLEDRDLLAAAKTGSGKTLAFLIPAVELI
VKLKFMPRNRTGVLILLPTRELAMQTLGVLKELMTHHVHTYGLMGGSNRSAEAQKLDNGI
NIIVATPGCLLGHMQNTPGFMYKNLQCLVIDEAHLILDVGFEEELKQIIKLLPTRRQSML
FSATQIRKVEDLARISLKKEPLYVGVDDDKANATVDGLEQGYVVCPSEKRFLLFFTFLKK
NRKKKLMVFFSSCKSMKYHYELLNYINLPVLAIHGRQRKNKCTTTFFQFYNADSGILLCT
DTAARGLDIPEVDWIVQYDPPDDPKEYIRVGRTARGLNGRGHALLILRPEELGFLRYLKQ
SKVPLSEFEFSWSKISDIQSQLEKLIEKNYFLHKSAQEAYKSYIRAYDYHSLKQIFNXNN
LNLPQVALSFGFKVPPLVDLNVNSNDGKLKKRGGGGSFAYQKAKKVEKYKIFKHISRKSS
DSRQFSH
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatctacccatgaaactcctgcacaagaagatagagaaacagaatctcaagttg
cacctgcgacacctgaagctccagggggcctcagatgtgagcttatcagaaacacaaaat
ggagatgtgtctgaagaaacagtgggaggtgggaaggttaaaaaatctctaaaacagtct
ctgaacatgggctcgtcagaagcccagaatggagaggtagctaaagaaacagtggaaact
gtacaaataagaaagaaagaaagaaaatctaccataataatcaatggagaagcagcaaca
cagcctcccgattcagaatcaaaaaaaaagaagaagaaaaaaagaaaaatggtggatgac
actgggcctgatnnaaaaaaatcaaaaactgaagacaaaggggactctgaagaagggacc
caggctcctgaagagacagaaaacaatgaggagaagccagatgatgaggaagaggacagt
gaagtgcccagcctacccctgggactgacaggagcttttgaggatacttcatttgcttct
ctttctgatcttgtcaatgagaacactctgaaggcaataaaagaattggcttttacaaac
atgactgaaattcagcataaaagtatcagaccacttctggaagacagggatctccttgcg
gccgcaaaaacaggcagtggcaaaacgctggcatttctcattcctgcagtcgaactcatt
gtcaagttaaagttcatgcctaggaatagaacaggagttcttattctcttacctactagg
gaactggccatgcagactttgggtgttcttaaagagttaatgacacaccatgttcacaca
tacgggttaatgggtggcagcaacagatctgctgaagcacagaaacttgataatgggatc
aacatcatcgtggccacaccaggctgtctcctgggccacatgcagaataccccaggtttt
atgtataaaaatctacaatgtctggttattgatgaggctcatcttatcttggatgttggg
tttgaagaggaattaaaacaaattattaaacttctgccaacacgcaggcaaagcatgctc
ttttctgccacacaaattcgaaaagttgaagacttggcaaggatttctttgaaaaaggag
ccattgtatgttggtgttgatgacgataaagctaatgcaacagtggatggtcttgagcag
ggatatgttgtttgtccctcagaaaagaggttccttctgttctttacattccttaagaag
aaccggaagaagaaactgatggtcttcttttcatcctgtaagtccatgaaataccactat
gagttgctgaactacatcaatttgcctgtcttggccattcatggaaggcagagaaaaaat
aagtgtacaaccacattcttccagttctacaatgctgattcggggatattgttgtgtaca
gacacggcagctagagggctagatattcctgaagtcgactggattgttcagtatgaccct
ccagatgaccccaaggaatatattcgtgtgggaagaacagccagaggcctaaacggaaga
ggtcacgccttgctcatcttacgccctgaagagttgggtttccttcgttacttgaagcaa
tccaaggttccattaagtgaatttgagttttcctggtccaagatttctgacattcagtct
cagcttgaaaaattgattgaaaagaactacttccttcataagtcagcgcaggaggcatat
aagtcctacattcgagcatatgattaccattctctgaaacagatcttcaatnttaataac
ttaaatttgcctcaagttgctctgtcatttggtttcaaggtgcctcctcttgttgatctg
aacgtgaacagcaatgatggcaagcttaaaaagagaggaggtggcggcagctttgcatac
cagaaagccaagaaagttgagaagtacaaaatcttcaaacacattagcaggaagtcctcc
gacagccggcagttctcccactaa
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