Nyctereutes procyonoides (raccoon dog): 129507082
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Entry
129507082 CDS
T09008
Symbol
SCN11A
Name
(RefSeq) sodium channel protein type 11 subunit alpha
KO
K04843
voltage-gated sodium channel type XI alpha
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
npo04040
]
129507082 (SCN11A)
Ion channels [BR:
npo04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129507082 (SCN11A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
129507082
NCBI-ProteinID:
XP_055177258
LinkDB
All DBs
Position
Unknown
AA seq
1771 aa
AA seq
DB search
MDDRCYPVIFPDERNFRPFTSDTLATIEKRIAIQKEKKRCKDKTTAEPQPRPQLDLKVSR
KLPKLYGDIPHELIARPLEDLDPFYRNHKTFMVLNKKRTIYRFSAKRALFILGPFNPIRS
LAIKISVHSLFSMFIICTVIINCVFMATAHGKDKNNTDTDNAEYVFTGIYIFEALIKILA
RGFILDEFSFLRDPWNWLDSIVIVTAFVSYSPNTILNNSISMSSLRTFRVFRALKAISVV
SGLKVIVGALLRSVKKLVDVMILTLFCLSIFALVGQQLFMGSLNQRCVKASCTDINKLSD
SCFEKKNSSEFRMCGIWMGESACSEGFQCNHTKRNPDYNYTNFDNFGWSFLAMFRLMTQD
SWEKLYQQTLRASGLFSVFFFVVVIFLGSFYLINLTLAVVTMAYEEQNRNVAAETEAKEK
MFQEAQRLLKEEKEALVAMGIDRSSLNSLEASSFSSKKRKLFGNRKRKSFFLRDSGKDQT
PGSDSDEDSTKKPHILEQTKRLSQNLSVDYCDDHRDPFQRQRALSAVSILTITMQEQEKS
QEPCLPCGENLASRYLVWNCSPRWLCIKKALRTVMTDPFTELAITVCIIINTVFLAMEHY
KMDQSFESILYTGNLVFTGIFMAEMCLKIIALDPYNYFRRGWNIFDSIVALLSFVDVMIN
IIVGKQCPRVFHSLRVLRVFKLAKSWPTLNTLIKIIGHSVGALGNLTVVLAIVVFIFSVV
GMQLFGSQFNSVKSNRRSCNPTVPCLRRWHMGDFYHSFLVVFRILCGEWIENMWECMQET
NQTLCIVVFLLIMVIGKLVVLNLFIALLLNSFSNEERDGNLDGESKKTKVQLALDRFHRV
FCIVINTLEHFCHKWCRTQNSPKRTKVTGGPAAQSKDIIPLVTEMKRGPETREEHDQTWL
APLAEEEDGFESSGENNAQHITQPEAGKQAFEFHQETKKSTSPGAQSVEIDVFSEDDICL
SKQDPQKKSDTASVFSECSTIDPQDPFGRVTEMVLKKEPERCFPKGLGHCFPCCSMNKRK
SPWIIWWNLRKTCYQIVKHSWFESFIIFVILLSSGALVFEDIYLEERPNIRDLLNCTDHI
FTYIFILEMGLKWVAFGFRKYFTSVWCWLDFIIVIVSVTSLIDLKSLKSFRTLRALRPLR
ALSQFQGMKVVVNALIGAIPAILNVLLVCLIFWLIFCILGVNFFSGKFGRCINRTDINSV
INYSTIANQSQCEGGNLSWVNLPVNFDNVGMAYLALLQVATFKGWMDIMYAAVDSRGKEQ
QPGFEESPYNYLFFVAFIIFGSFFTLNLFIGVIIDNFNQQQKKISGEDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPLNKCQGLMYDLVTNQVFDVIIIILIFLNMLSMMAESENQLDTT
KFILDRLNLAFVVIFTIECLIKIFALRQYYFTIGWNLFDCVIVVLSIVSTMVSALENQEH
IPFPPTLFRIVRLARIGRILRLVRAARGIRTLLFALMMSLPSLFNIGLLLFLVMFIYAIF
GMSCFCKVNEEFGIDDIFNFKTFVGSILCLFQITTSAGWDALLRPMLQSKDSCNPNLDSR
HLPAIAITYFVSYIIISFLIVVNMYIAVILENFNTATEESEDPLGEDDFEIFYEVWEKFD
PEATQFIKYSALSDFADALPEPLRVAKPNKFQFLMMDLPMVSGDRLHCLDILFAFTTRVL
GDSSGLDNMKVMMEEKFMEANPSKKLYEPIVTTTKRKEEERCAAIIQKAFRKYKVKMSTY
ALEDRPGSPLHTLCNGDLSGSGVAEGKVHYD
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagatgctacccagtgatctttccagatgaacggaatttccgtcccttcact
tctgatactctggctacaattgagaagaggattgccatccaaaaggagaaaaagaggtgc
aaagacaagacaacagcagaaccccagcctcggcctcagcttgacctaaaggtctccagg
aagttgcccaagctctatggtgatattccccatgagctgatagcaaggcccctggaagac
ttggacccattctacagaaatcataagacatttatggtgttgaataaaaagagaacaatc
taccgcttcagtgccaagcgtgccttgttcattcttgggcctttcaatccaatccgaagt
ttagccatcaaaatctcagtccattcattgttcagcatgttcatcatctgcaccgtcatc
atcaactgcgtgttcatggccaccgctcatgggaaggacaaaaataatacagataccgac
aatgctgagtatgtcttcactgggatttatatttttgaagctttaataaaaatattggca
agaggttttattctggatgagttttcttttcttcgagatccatggaactggctggactcc
attgtcattgtaacagcgtttgtatcatactcaccaaataccatactcaacaacagcatc
agtatgtcatccctgcgtaccttccgagtgtttagagctttgaaagcaatttcagtggtt
tcaggtctaaaagtcattgttggtgccttgctacgctctgtgaagaagcttgtcgacgtg
atgatcctgactctcttttgcctcagcatcttcgccctggtaggtcagcagctcttcatg
ggaagtctgaaccaaagatgtgtcaaggcgagctgtacggatatcaataaacttagtgat
agttgctttgaaaagaaaaattcctctgaattcagaatgtgtggcatctggatgggtgaa
agtgcctgttctgaaggatttcaatgcaaccacaccaaaaggaatcctgactataattat
accaattttgacaactttggttggtcttttcttgccatgtttcggcttatgacccaagat
tcctgggagaagctttatcaacagaccttgcgtgcctcagggctcttctcagttttcttc
tttgtggtagtcatcttcctgggctctttttacctgattaacttaaccctggctgttgtc
accatggcttatgaggaacagaacagaaacgtagctgctgaaacagaggccaaggaaaag
atgtttcaggaagcccagaggctgctgaaggaggagaaggaggctctagttgccatggga
attgacagaagttcacttaattccctggaagcatcatctttttcctcaaagaagagaaag
ctatttggtaataggaaaagaaagtccttttttttgagagactctgggaaagaccagact
ccaggatcagattctgatgaagattccacaaaaaagcctcacatcctggagcaaaccaaa
cgactctcccagaatctatcagtggattattgtgatgatcacagggaccccttccaaagg
cagagggccctgagtgctgtcagcatcctcaccattaccatgcaggaacaagaaaaatca
caggagccttgcctcccatgtggggaaaacctggcatccagatacctcgtgtggaactgt
agtccacgttggctgtgcattaagaaggccctgagaaccgtgatgactgacccctttact
gagctggccatcaccgtctgcatcatcatcaacactgtcttcttggccatggagcattac
aaaatggaccagagttttgagtctatattgtacacagggaatttggttttcactggcatt
ttcatggcagaaatgtgcctaaaaattattgcacttgatccctacaactactttcgccga
ggctggaacatttttgacagcatcgttgctcttctgagttttgtagatgtgatgatcaat
ataattgtaggaaaacaatgtccgagggttttccattccttgagagtgctgagggtcttc
aagttagccaaatcctggccaactttaaacacactgattaagataattggccactccgtt
ggagctctgggaaacctgactgtggtcctggctattgtggtctttattttctcagtggtt
ggcatgcagctttttggctctcaattcaattctgtaaagagtaatagaagatcctgcaac
cctacagtcccatgtttacgacgctggcacatgggggacttttaccattcctttctggtg
gtattccgcatcctctgtggggaatggattgaaaacatgtgggaatgtatgcaagagaca
aatcaaacactgtgcattgtcgtctttctattgatcatggtgatagggaaactcgtggta
ctcaacctcttcattgccttgctgctcaattccttcagtaatgaggagagagatggaaac
ttggatggagagtccaaaaaaaccaaagtccagttagccctggatcggttccaccgggtt
ttttgcattgttataaatactcttgagcatttttgtcacaagtggtgcaggactcaaaac
tcaccaaagagaacaaaggtgacaggaggccctgctgcccaaagcaaagatatcattccg
ttggtcacagagatgaaaaggggcccagagactagggaggagcatgatcagacgtggttg
gccccacttgcagaggaagaggatggttttgaatcttctggagaaaacaatgcacagcat
atcacacaacctgaggctggaaaacaggcctttgaattccatcaggagaccaagaagtcc
accagcccaggagctcaaagtgtggaaattgacgtgttctctgaggatgacatatgtttg
tcaaaacaagatccccaaaagaagtctgatactgccagtgtgttctcagaatgtagcacc
attgatccacaggatccctttgggcgggtaactgaaatggttctcaaaaaagaaccagag
cgatgttttcccaaaggcctgggtcactgcttcccatgctgttccatgaacaagagaaag
tccccctggatcatttggtggaacctgcggaaaacctgctaccaaatagtgaaacacagc
tggtttgagagctttattatctttgtgattctgctgagcagtggggcactggtatttgaa
gatatttaccttgaggaacgacccaatatccgagatttacttaattgtactgaccatatt
ttcacatacatttttatcctggagatgggtctaaaatgggtggcctttggatttaggaag
tatttcaccagtgtctggtgctggctcgatttcatcattgtgattgtctctgtgaccagt
ctcattgacttaaagagcttgaagtcctttcggaccctacgagcactgaggcccttgcga
gcattgtcccagttccaaggaatgaaggtggtagtcaatgctctcataggtgccatacct
gccattctgaatgttttgcttgtctgcctcattttctggctgatattttgtatcctggga
gtaaacttcttttctggaaaatttggaagatgcattaatagaacagatataaactcagtt
ataaattacagcactattgcgaatcaaagtcaatgtgaaggtggaaatttatcttgggtc
aaccttccagtcaactttgacaatgtgggaatggcttaccttgccctgctgcaagtggca
acatttaagggctggatggatattatgtatgcagctgtcgattccagagggaaagaacaa
cagccagggtttgaggaaagcccatacaactaccttttctttgtggcttttatcatcttt
ggttcattctttactctgaatctctttattggtgttataattgacaacttcaaccaacag
cagaaaaagataagtggtgaagacatttttatgactgaagaacagaagaaatactataat
gcaatgaaaaaattaggatccaaaaaacctcaaaagcccattccaaggcctctgaataaa
tgccagggtctcatgtatgacctagtcacaaaccaagtctttgacgtcattatcatcatc
ctcattttcctcaacatgcttagcatgatggctgaatcagaaaaccagcttgataccaca
aaattcatccttgatcgtctcaacctggcctttgtggtcatctttacaattgagtgtctc
atcaaaatctttgctttgaggcaatattacttcaccattggctggaatttatttgattgt
gtgatcgtggttctttctattgttagtacaatggtttctgccttggagaaccaggagcat
attcctttccctccaacactcttcaggattgtccggttggctcgcattggtcgaatcctg
agactcgttcgggcagcacgaggaataaggactctcctttttgctctgatgatgtccctt
ccctctctattcaacatcggtcttctactttttctggttatgtttatttatgccattttt
ggtatgagctgtttttgcaaagtgaatgaggagtttggaattgatgacatattcaacttc
aaaacttttgttggcagcatactctgtctcttccagatcaccacctcagcaggctgggat
gccctccttaggcccatgctgcaatcaaaggattcatgcaaccccaatttagacagccgc
cacctccctgccatagccatcacctacttcgtcagttacatcatcatctcctttcttatt
gttgtcaacatgtacattgctgtgattttagagaacttcaacacagccacagaagaaagt
gaggaccctttgggtgaagatgactttgagatattctatgaagtctgggaaaagtttgac
ccagaagcaacacagttcatcaaatattctgccctttctgactttgctgatgcccttcct
gaacctttgcgtgtggcaaagccaaataaatttcaatttctcatgatggacttgcccatg
gtgagtggagatcgtcttcactgcttggatattctcttcgcattcaccactagggtactc
ggtgactccagtggcctggacaacatgaaggtcatgatggaggagaagttcatggaagcc
aacccttccaagaagttatatgaacccatagtcaccaccaccaagaggaaggaagaggaa
aggtgtgctgctattattcaaaaggcctttcgaaaatataaggtgaagatgtccacgtat
gccttggaagataggcctggttcaccactccacacactctgcaatggagacctttctggc
tctggggtggccgagggcaaggtccactacgactga
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integrated database retrieval system
