KEGG   Nyctereutes procyonoides (raccoon dog): 129507383
Entry
129507383         CDS       T09008                                 
Symbol
TRIM42
Name
(RefSeq) tripartite motif-containing protein 42
  KO
K12018  tripartite motif-containing protein 42
Organism
npo  Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:npo00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:npo01009]
    129507383 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:npo04121]
    129507383 (TRIM42)
Protein phosphatases and associated proteins [BR:npo01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129507383 (TRIM42)
Ubiquitin system [BR:npo04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    129507383 (TRIM42)
SSDB
Motif
Pfam: fn3 zf-B_box Pur_ac_phosph_N Ig_DSCAM-DSCAML_C CHDCT2
Other DBs
NCBI-GeneID: 129507383
NCBI-ProteinID: XP_055177734
LinkDB
Position
Unknown
AA seq 724 aa
METAMCVCSPCCTWQRCCPRLCSCLCCKFLFTSERNCTCFPCPYKDERNCQCCHCTCSEN
PNCHWCCCSWANDPNCKCCCTTSSNLQCYYYESRCCRNATITFHKGRLRSIRTSSKTALR
IGASDTQVDEVKPTPANSNLVDHLSCPMCSRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPVCSRSHCMPYSHKMQLPENYLRGRLTKRYMQQHGYLKWRFDRSSGPIVCQV
CRNRRIAYKRCITCRLNLCNDCLKTFHSDVAMQDHVFVDTSTEDQDEKICIHHPSSRITE
YCRHDNQLLCTFCKTAFHNGHDTISLIDACSERAAALFSAIAKFKAVRYEIDNDLMEFNI
LKNSFKADKEVKRKEIRNGFLKLRSILQEKEKSIMEQIENLEVSRQKEIEKYVYVTTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQSTYRPDPQLRLHSLHCMPLDFA
ELSSAIHELFPTGPKKVCSSGDSLPSPYPMHSEMMIARKVTFSTHSFDNQQIYQRSSSLL
SFNATGGEKAKMGLEAYGRAQSASPAKPTDGLYTYWSAGAENQSVQNSNSFHNWYSFNDG
SVKTPGPIVIYQTLVYPRAAKVYWTCPTEDVDSFEMEFYELITTPPNNVRTELCGQIRDI
MQQNLELHNLTPNTEYLFKVRAINDNGPGQWSDICKVVTPDGRGKNRAKWGLLKNIQTAL
QKHF
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggagactgctatgtgtgtttgctctccatgttgtacatggcagagatgttgtcctcga
ttatgctcctgtctgtgctgcaaattcctcttcacctcagagcggaactgtacctgcttc
ccctgcccttataaggatgagcgcaactgccagtgctgccactgtacctgctccgagaac
cccaactgccactggtgctgctgctcctgggccaatgaccccaactgcaaatgctgctgc
acgaccagcagcaacctccagtgctactactatgagagccgctgctgccgcaatgccacc
atcacgttccacaagggccgcctcaggagcatccgcacctcctccaagactgcactgcgc
atcggggccagcgacacccaggtggatgaagtgaagcccacgcctgcgaacagcaacctg
gtggaccatctctcctgccccatgtgcagccggctgcgcctgcactccttcatgctgccc
tgcaaccacagcctgtgcgagaagtgcctgcggcagctgcaaaaacacgccgaggtcaca
gagaacttcttcatcctcatctgccccgtgtgcagccgctcgcactgcatgccctacagc
cacaagatgcagctgcccgaaaactacctgcgcgggcggctcaccaagcgctacatgcag
cagcacggctacctcaagtggcgcttcgaccgctcctccgggcccatcgtctgccaggtc
tgccgcaaccggcgcattgcctacaagcgctgcatcacctgccgtctcaacctgtgcaac
gactgcctcaagaccttccactcggacgtggccatgcaggaccacgttttcgtggacacc
agcaccgaggaccaggatgagaagatctgcatccaccacccgtccagccgcatcactgag
tactgccgccacgacaaccagctgctctgcaccttctgcaagacggctttccacaacggc
cacgacaccatcagcctcatcgatgcctgctccgaaagggccgccgcactcttcagcgcc
atcgccaagttcaaagcagtccgctatgagattgataatgacctaatggagttcaacatt
ttaaaaaacagctttaaagctgacaaggaggtgaagcgaaaagagatccgaaatggtttt
ctcaagctgcgcagcattctacaggagaaggagaagtccatcatggagcagatagagaat
ctggaggtgtccaggcagaaggagattgaaaaatatgtgtacgtcacaaccatgaaagtg
aatgaaatggatggcctgatcgcctattccaaggaagcactgaaggagacaggccaggtg
gcgttcctgcagtctgccaagattctcgtggaccagatcgaagatggcatccagagcacc
tataggcctgacccgcaactccggctacactccttgcactgtatgcccctggactttgct
gagctcagcagtgccatccatgagctcttccccacaggacccaagaaggtatgctcctca
ggggactccttgccctccccctatcccatgcactcagaaatgatgattgccaggaaggta
actttcagcactcacagctttgacaaccaacagatataccagcgaagctcctccttgttg
tccttcaatgccacgggtggtgagaaggccaagatgggtctggaagcctatgggcgagcc
caatctgcctcacctgccaaacccacagatggcctctatacatactggagtgcaggggca
gaaaaccagtctgtgcagaacagcaacagcttccacaactggtactcattcaatgatggt
tctgtgaagaccccaggcccaattgttatctaccagactctggtgtatcctagagccgcc
aaggtttattggacatgcccaacagaagatgtggactcttttgagatggaattttatgaa
ctcattactacccctcctaacaatgtgcggacagagctttgtgggcaaattcgggatata
atgcagcagaatctggaactgcacaacctgacccccaatactgagtatctgtttaaagtt
agagccatcaacgacaatggtcctgggcaatggagtgacatctgcaaggtggtaacccca
gatgggcgtgggaagaaccgagctaagtggggcctgctgaagaacatccagactgccctc
cagaagcacttctga

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