Nyctereutes procyonoides (raccoon dog): 129507506
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Entry
129507506 CDS
T09008
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129507506 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npo03021
]
129507506 (SETX)
Enzymes [BR:
npo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129507506 (SETX)
5.6.2.5 RNA 5'-3' helicase
129507506 (SETX)
Transcription machinery [BR:
npo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
129507506 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
UvrD-helicase
AAA_30
AAA_22
nSTAND3
ResIII
SLFN-g3_helicase
NAT10_TcmA_helicase
AAA_16
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
129507506
NCBI-ProteinID:
XP_055177870
LinkDB
All DBs
Position
Unknown
AA seq
2691 aa
AA seq
DB search
MLQKRCRMSTCCWCTPGGISTVDFLQRYASKIYSSEFQTADEDLCYCLECVTEYHKARDE
LPFLHEVLWELETLRLINHFEKSMKAEIGDDDELYIVDNNGEAQLFDFTGQDFENKLRVP
LLEILKYPYLLLHERVSELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNEMVRRWAIL
TARNLGKVDRDDYYDLQEVLTCLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTN
YKNYWLGICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQADDDSVDPFWPALHCF
MVILDRLGSKVWGQRIDPIEAFQTIINNVSYNREIQNIRNSSVRTKLEPESYSDDMVTCS
QIVYNYNPEKTKKDSGWRSAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIP
FVQSLMDLKDLGMAYIVEIIHHLHSEVKDVLNQTDAVCDKVTEFFLLILVSVIELHRNKK
CLHLLWISSQQWVEAVVKCAKLPTTAFTRNSEKSSGNCSKGTAMISSLSLHSMPSNSVQL
ACVQLIRSLLKEGYQLGQQTLCKRFWDKLNLFLRGNLSLGWQLTTQETHELQACLKQIIR
NIKVKVPQCSNFVDLSPTCKSSPVSYNKEESEQIERKSKKDLFCLENSSPTFPKESIKAE
MYQMQENILIKASNTVEEDNEQNYIKDLKLEDLSAESCIKQSSKSLFTERAQDQVKISTG
KPKSVKENCTSRSVLQNFTSRNGPERACDRGIITHLLTDSLEKMSTSNEDFSFKDDVLGK
TSKTKIKSQKDEICAKLSHVIKKQHRKSTFIDNIGNLEENLTVSNVDNFYSRKDSGDQKG
DSFMHSLSLDPNGILDDKNGKQKSQKSLLLKKKQLKSEEFDIFSYHENSYQIQECHTDDK
DLVSFTEMTNTFVKKTPFKDPVTVLESRDKEISKSTSPVSSHLRERIHGLSPQSDTLTDS
QIDRDLHKLSLIAQASVIKFPSDSTQKSSSQLRRKVKDRCFLADQNNTGEACWGQVIIIS
DSDDDDDEEEEEEGILGFEKPIKQDKIGIKKEYLEQHTSIASTNVEKKLMKEEETLLQFE
ESDSQFFEFESPCEVFSVWQDQEPDKNSVQEGEKNSRSTDIADLMNDWGYETDYVSEEVI
KKVAEGIEKHTEPQSSTVEEFCKIEVKKRKRKRFEKPMAEDPVRPSSSERNEDQPDILNG
RGLTENDLKNRDLRMASPSSSARRDKNTTVSLKKSSPKLRTYSKPIRRVPLSKTPKKTHS
DTKKGQSKNSNYISCRTTPAVVPPKKFRQCPEPTSTVEKLGLKKAPRRAFELSQRSLEYL
VQLRDHGKTVGVVDTRKKTKLISPQTLSVRNNKKLLTSQDLQFRRQMRPKSQQNKKGLLD
YESKETTRAGPLPAQNSDILVPESDSSDYSSKGGTEVVANNTGKPLIKCVSLEPEPIKTK
YASRVTDDTCLLNQCASVVLNGRIPTNEVIVSASADPLAGGDPTIHHLELATLKEGEPEY
NSDTEDENIFLTQHHPEDMDLCSQMENGNEKLIEIVHRRDTAQVEEDSVGQPQLASWSST
KCKYKDCVETPENQGEYCSKHCEAKAADEDVFRKPALPLSASKPSRPSTAKIFSSSSTSR
IAGLSKSLESSSGLPPALKNKSNGGQAILKAAQPTSLLSPKAVGEVKSLCNVLHPQTPNN
SNRQGYKLTFGENKSFSASSPVNILLSSQSISDIFVKEILKWKYEMFVNFDQCGPPASLC
QSISRPVPVRFQDCGDYFNVFFPLMILNTFETVAQEWISSPNKEKFYQLHLRKFPADYKK
YWEFVVHLEECELAKQLHPKENDLVFLVSERQIGEKKDTERNCMQDLREYHCGYVHKFRR
TSVMRNGKSECFLYIQSQDNLPVNLNEFVKCVVISSLVTTQRKLKAMSLLSGRNQLARAV
LNPNPMDFCTKDLLTTTSERIVAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPG
TGKSKTIVGLLYRLLTENQRKGHSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKE
KCKDKKNPLGNCGDINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHVQEMHRRKEF
LDHQLDELSRQRALCRGGREIQRQELDEKIAKVSKERQELASKIKEVQGRPQKTQSIIIL
ESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLTPLIHRCNKLILVG
DPKQLPPTVISMKAQEYGYDQSMMARFYKLLEDNVEHNMIGRLPVLQLTVQYRMHPDICL
FPSNYVYNRSLKTNRQTETNRCSSDWPFQPYLVFDVGDGSERRDNDSYVNVQEIKLVMEI
IKLIKDKRRDVTFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDGFQGRQKDCVI
VTCVRANAMQGSIGFLASLQRLNVTITRAKYSLFILGHLRTLMENQHWNHLIQDAQKRGA
IIKTCDKNYRHDAAKILKLKPVLQRSLTHPPAIAPEASRPQGGLLSGKLDSEFAKTSFTS
SLYHTASDSKESAGTVTTKDPERPPIQDRLRDPRLLRRLGMDPEARGTCLRDPQPLSPQH
LGATPPSGEPGFPMSHQDPGGVPQATTRGATPNNHRPHVQGEPPVAGTDVPTSKRKGDWE
AGLSHRRESRAFSEGDQESWSPDSKHSRRNLDWDRRGLEKDDSGSKKRKLL
NT seq
8076 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaagaggtgcagaatgagcacatgttgttggtgtacgccaggtggcatttcc
accgttgacttcctgcagcggtatgcatccaagatctactccagtgagtttcaaacagct
gatgaagacctctgctactgcttagagtgtgtgactgaataccacaaagcaagggatgag
ctgccattcttgcatgaggttttatgggaattagaaactttacgtctcataaatcacttt
gaaaaatccatgaaggcagaaattggagacgacgatgaattgtacatagtagacaataat
ggagaggcacagctgtttgactttactggccaagactttgaaaataagcttcgagttcct
cttcttgaaatactgaaatatccttatctgcttttacatgagcgtgttagtgaactgtgt
gttgaagcactttgtcggatggaacaagctaattgctcctttcaggtttttgacaaacat
ccaggcatctatctgtttttggtccatcccaatgaaatggttcggcgttgggctatcctc
actgccagaaatttgggaaaagtggacagagatgattattatgacttgcaggaggttttg
acttgcctttttaaagtcatcgagttggggcttttggaaagtccagacatttatacttct
tctgtccttgagaagggtaaactgattcttctgccctcacacatgtatgataccaccaac
tacaaaaactattggttaggtatttgcatgttgctgaccattctggaggagcaggccatg
gactcactgttgctgggctcagacaaacagaatgattttatgcaatcaatacttcacacc
atggagaggcaagcagatgatgatagtgtggatcctttctggccagcgttacactgtttc
atggtgattctggatcgccttggatctaaggtctggggtcaacgtattgatcctattgag
gcatttcaaaccattatcaacaatgtgagctacaatagagagatccaaaatatacggaac
agctctgtaaggaccaagttagagccggagtcatattcggatgatatggtgacttgcagc
cagattgtatacaactataatcccgaaaagaccaaaaaggattcagggtggagatcagcc
atttgcccagattattgtcctaacatgtatgaagagatggaaacattagccagtgtgctt
caatcagatattggtcaagacatgcgtgttcataacagcacgtttctgtggttcatccct
tttgttcagtccctaatggatcttaaggatttgggtatggcttacatagtagagattatt
catcatctgcactccgaagtcaaagatgtcctcaaccaaacagatgccgtatgcgacaaa
gttactgaattttttcttctgattttggtgtctgtgattgagctgcatagaaataaaaaa
tgtttgcatttgctgtggattagttcccagcagtgggtagaagccgttgtaaaatgtgcc
aagcttcctactacggcattcacaaggaattctgagaaatcatctggaaattgctctaag
ggaacagcaatgatctcatctctgtctttgcattcaatgccgtcaaattctgtacagctg
gcttgtgtgcagctgattagaagtctccttaaagaaggttatcagcttgggcagcaaact
ctatgtaagcgattctgggataagctcaacttatttctgcgtggaaatttatctttaggt
tggcagttgactactcaggagacccatgaattacaagcttgtttaaagcaaattattaga
aacattaaagtcaaagtacctcaatgtagcaattttgtggatctgagtcctacatgtaaa
agctctcctgtatcttacaataaagaagaaagtgaacaaatagagaggaagtctaaaaaa
gaccttttctgtctggaaaactccagtccaacatttcctaaagaatccataaaagctgag
atgtatcaaatgcaagagaacatactgattaaagcaagtaacaccgtagaagaggataat
gaacaaaattacataaaagatttgaagctagaagatctctcagccgagtcatgcataaag
cagagtagtaaaagccttttcactgaaagagctcaagatcaagttaaaataagtacaggg
aagccgaagtctgtgaaagagaattgtacttcaagaagtgtactgcagaattttacttca
agaaatggtccagaaagggcatgtgacagaggaataataacacatttgttgaccgattct
ctggagaagatgtccacatcaaatgaggatttctctttcaaggatgatgttcttggcaaa
acctcaaaaacaaaaattaagtcacagaaagatgaaatctgtgctaagttatcacatgta
ataaagaagcaacacaggaaaagtacttttatcgataatattggtaatttagaggaaaac
ctgactgtatctaatgttgacaatttctattcaaggaaagattcaggcgatcagaaaggg
gatagcttcatgcacagtctctctttagaccctaatggcattctagatgataaaaatggg
aaacaaaaatctcaaaagagtctgttgctgaaaaagaaacagttaaagagtgaagagttt
gatatcttctcttaccatgaaaacagctatcaaatacaggaatgtcatactgatgataaa
gatttggtctcatttacagaaatgaccaatacttttgtgaagaaaactcccttcaaagat
cctgtgactgttcttgagtcaagagataaggaaattagcaagagtaccagtccggtatct
tctcacttgagagaacgcattcatggcctcagtcctcagtctgacaccttaacagattct
cagatagacagagacctccacaagttatctttaatagctcaagccagcgttattaagttc
ccatcagattcaactcaaaaaagctcctcccagctacgaagaaaagtaaaagacagatgt
ttcctggccgaccagaataatactggggaagcctgttggggccaggttatcattatttca
gattctgatgatgatgatgatgaagaagaagaagaagaaggaattctgggttttgagaaa
cctataaaacaagataaaataggcatcaagaaagaatatctggagcagcatacttcaata
gctagtacaaatgtggaaaagaagctaatgaaggaagaggagacccttctgcagtttgag
gaatcagattctcagttttttgagtttgaaagtccatgtgaagtgttttcagtttggcaa
gatcaggaacccgacaagaattcagttcaagagggtgaaaaaaattcacgttcgactgac
atagctgatctcatgaatgattggggttatgagacagattatgtatctgaagaggttatt
aagaaagtagcagagggcattgaaaaacacacagaaccacagagtagtactgttgaggaa
ttttgtaaaattgaagtaaaaaaacgtaagagaaaacgatttgagaaacctatggctgaa
gatcctgtacggccttcatcatctgagagaaatgaggaccagcctgatattcttaatggg
agaggtctgactgaaaatgatttaaaaaatagggacctgaggatggcaagtcccagttca
agtgctcgtagagacaaaaacactacagtttcactaaagaagtcttctccaaagcttcgt
acttattccaaacccattaggagagtcccactttctaaaactcccaagaagacacattca
gataccaaaaaaggacagagtaaaaattctaattacataagttgtagaacaactcctgct
gtagttccaccgaagaaatttcgccagtgccctgaaccaacttcgacagttgagaaactt
ggcctgaaaaaggctcctcgtagggcatttgagttgtcccagcgatctctagagtattta
gttcaattacgtgaccacggcaaaactgttggagtggttgatactagaaaaaagacaaag
ttaatttctcctcagactctctctgtcagaaacaataagaaactgctgaccagtcaggat
cttcagtttcgaaggcagatgagacccaaatcacaacaaaataaaaaaggacttttggat
tatgaaagtaaagagactacaagagcaggtcctcttccagcacagaattctgacatactt
gtcccagaatccgatagttcagattatagttctaaaggaggaacagaggtggttgctaac
aacactgggaaaccattaataaagtgtgtgtctttggaaccagaacccataaaaacaaaa
tatgcctctcgagtgactgatgacacttgtcttttgaaccagtgtgcctctgttgtgtta
aatggaagaataccaacaaatgaagtcattgtctctgcatcagcggaccccttagctgga
ggtgacccaacaatacatcatttagagttggcaactttgaaagagggagagcctgaatac
aacagtgatacagaagatgagaatatatttctaacccagcaccatcctgaagatatggat
ttatgttcacagatggagaatggtaatgagaaactcattgaaatagttcatagaagagat
acagctcaggtggaagaagattctgtaggtcagcctcagttggcatcgtggagtagcaca
aaatgtaagtacaaagattgtgttgaaaccccggaaaaccagggtgaatactgctcaaaa
cactgtgaagctaaagcagcagatgaagatgtatttcgtaaacctgccttgcctctttct
gcatctaagccttcgagaccttccactgctaagatttttagctccagcagcacctcacga
attgctggtctttccaagtctttggagagttcctcggggcttccaccagctctaaaaaat
aagtcaaatgggggacaggctattttgaaagccgcacagccaacctctctattgtctcca
aaggcagtgggcgaagtgaagagtctgtgcaatgttcttcatcctcagactccaaataat
tccaacaggcaaggttacaaactgacatttggtgaaaacaaatctttctcagcttcctct
ccagtaaacattctcttgtcatcacagtccatttctgacatctttgtcaaagagatctta
aaatggaagtatgaaatgttcgtcaactttgatcagtgcgggcccccagcaagcctttgt
cagtccatctcaagacctgtgcctgtcagatttcaagattgtggagattattttaatgtt
ttcttccctttgatgatattgaatacttttgaaaccgtggcacaggagtggatcagctct
ccaaacaaagagaaattctatcagttgcatttacgaaaatttcctgctgattataaaaaa
tattgggagtttgtggttcatcttgaagaatgtgaactagctaaacagcttcatccaaag
gaaaatgatttggtgtttttggtttctgaaagacaaattggagagaagaaagatacagag
agaaattgcatgcaggatctccgtgaatatcattgcggttatgttcataagtttcgccgc
acttcagtcatgcgcaacgggaagtctgagtgtttcctttacatccagagtcaagataat
ttgccagtcaatttaaatgaattcgtgaaatgtgttgtaatcagttctctggtaactacg
caaaggaagttgaaagccatgtctctgttgagtggacggaaccaactggccagagctgtt
cttaatccaaatcccatggacttctgtacaaaagacttactaactacaacttctgagaga
attgtcgcctacttaagagatttcaatgaagaccaaaagaaagcaatagaaactgcatat
gccatggtcaaacactccccgtcagttgccaagatctgtctgattcatggaccaccagga
acagggaaatcaaaaactattgttggcctcctgtaccgcctcctgacagagaaccagaga
aaagggcattcagatgaaaactccaatgccaaaatcaaacaaaaccgtgtccttgtgtgt
gcaccttccaacgcagctgttgatgaacttatgaaaaaaatcatcctcgaatttaaagaa
aaatgtaaagacaagaagaatcctttgggaaactgtggagatataaatttagttcgtctg
ggtccagaaaagtctattaataatgaagttctaaaattcagtttggatagccaagttaac
cacagaatgaaaaaagacttaccctctcatgttcaggagatgcacagaagaaaggaattt
ctagatcatcaacttgatgaactttcccgccagcgtgctttatgccgaggtggaagggaa
atacagaggcaagaattagatgaaaaaattgcgaaagtttcaaaagagaggcaggaacta
gcttccaaaattaaggaggttcaaggacgcccacaaaaaacacagagcatcatcatctta
gagtcccatgttatctgctgcacattgagcacgagtggtggtttactgcttgagtctgct
tttcgtgggcaagggggtgtccccttcagttgtgtcattgttgatgaggctggtcagtct
tgtgaggttgagactctgactccgctcatccatcgttgtaacaagctcatcctcgtagga
gatcctaaacagctccctcccaccgtcatttctatgaaagcacaggaatatggctatgac
caatcaatgatggcacgcttctacaagctgctagaagacaatgtggagcacaatatgatt
ggcaggctgcctgttttacagttgactgttcagtacaggatgcatccagacatatgtctc
ttcccctctaattatgtttataacagaagcttgaaaacaaatagacagactgaaaccaat
cggtgttcatcagactggccatttcaaccttacctggtgtttgatgtcggagacggttca
gaaagacgggataatgactcatatgtaaatgttcaagaaataaaactggtaatggaaata
attaaacttattaaagacaaaagaagggatgttactttccggaacattggcataataacc
cattacaaggctcagaagacgatgattcagaaggatttggacaaagagtttgatagaaaa
gggccagcagaagtagataccgtggatgggttccagggccggcagaaggattgtgttatt
gttacatgtgtcagagcaaatgccatgcagggctcaattggatttctggcaagtttgcag
agactgaatgtcaccatcacacgagccaagtacagtctcttcatcctcggacatttaagg
accctgatggaaaatcagcactggaatcatctgattcaggatgcacagaagcggggcgcc
atcatcaagacctgtgacaagaactataggcacgatgcggcgaagattctgaagctgaag
cccgtgctgcagagaagtctgactcaccctcccgccatagccccggaggcatccagaccc
cagggtggcttgctcagcggcaagctagacagtgagtttgccaagacctctttcacgtct
tccctgtatcacacggcatctgactccaaggaatctgctgggactgtcactacaaaggac
cccgaaaggcctcccattcaggaccgactgcgggacccacgactgcttcggaggttgggc
atggaccccgaggccagagggacgtgcctgcgggatccgcagcccctgagcccccagcat
cttggagcaacacctccctcaggagagccaggcttccccatgagtcaccaggacccaggg
ggtgtgccccaggccaccacccgaggagccacgccaaacaaccacagacctcacgtgcag
ggcgagcctccagtggcgggcacagatgttcccacaagtaagaggaaaggtgactgggaa
gcagggctgagccacagaagagagagcagggccttcagtgaaggggaccaggagagctgg
agccccgacagcaagcactcgaggaggaacctagactgggacaggagagggctggagaag
gatgacagtggctctaagaaaagaaagcttttatag
DBGET
integrated database retrieval system
