Nyctereutes procyonoides (raccoon dog): 129507914
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Entry
129507914 CDS
T09008
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
npo03009
]
129507914 (DDX54)
Enzymes [BR:
npo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129507914 (DDX54)
Ribosome biogenesis [BR:
npo03009
]
Eukaryotic type
Pre-60S particles
Helicases
129507914 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
129507914
NCBI-ProteinID:
XP_055178698
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MAAGARVAAGPRSRAPMAQWRKKKGLRRRRGAASQPRSSDSEDGEFEIQADDDTRAQKLG
PGRPLPAFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLRTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDAKLNEQLKTSFFLVREDTKAAVLLHLLRTVVRPQDQTVVFVATKHHAEYLSELLTT
QGVSCTHIYSALDQTARKINLAKFTHNKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTPARPHEGSLGVDGVLGRV
PQSVVDDEESGLQSILTSSLELGGLSRVADNAQQQYVRSRPAPSPESIKRAKELDLTGLG
LHPLFSSRFEEKELQRLKLVDSIKNYRSRATIFEINASSRDLSSQVMRAKRQKDHKAIAS
FQQGRRGRQEDTAGPAPGCPAPQEEKPEEDEEEEAAGKSIEDVFTEVMGRKRQQPGPEGG
AKRRREEARHRDLEFYVPYRPKDFDSERGLSISGDGGAFEQQVAGAVLDLMGDEAQNLTR
GRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSEEE
GTSHQRGPERRGGKRGRGQGAAQPRSPGAPAGRVRSELKTKQQILKQRRRAQKLRFLQRG
GLKQLSARNRRRAQELQRGAFGRGAPSKKGKMRKRM
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcgcgcgcgtggcggccggacctcggtcccgcgctcccatggcccagtgg
aggaagaagaaggggctgcggaggcgccgaggcgcggcctcccagccccgcagcagcgac
tcggaggacggcgagtttgagatccaagcggacgatgacacccgggcccagaagctgggg
cctggcagaccgctgcccgccttccccacctcagaatgcacctccgacgtggagccggac
acacgggagatggtgcgagcccagaacaagaagaagaagaagtccggaggcttccaatcc
atgggcttgagctacccagtgttcaagggcatcatgaagaaaggctacaaggtgccaaca
cccatccagagaaagaccattcccgtgatcctggatggcaaggacgtggtggccatggcc
cggactggcagtggcaagacggcctgcttcctcatcccaatgttcgagcgcctcaagacc
cacagcgcccagactggggcccgtgccctcatcctctcgcccacccgagagctggccctg
cagaccatgaagttcaccaaggagctcggcaagttcacaggcctcaggactgccctgatc
ctgggaggagataagatggaagaccagtttgcagccctgcatgaaaatcctgacataatt
attgccactccagggcgtctggtgcacgtggctgtggagatgaacctgaagctgcagagt
gtggagtacgtggtattcgatgaggcagacaggctctttgagatggggtttgcagagcag
ctgcaagagatcatcggccgcctccccgggggccaccagacggtcctgttctctgccaca
ctgcccaaactgcttgtggagtttgcccgggcaggcctcacggagcctgtactcatccga
ctcgatgtggatgccaaactcaatgagcagctcaagacctccttcttccttgtgcgcgag
gacaccaaggctgctgtgctgctccacctgctgcgcaccgtggtgcggccccaagaccag
acggtggtgtttgtggccacgaagcaccacgccgagtacctcagcgagctgctgacgacc
cagggcgtgagctgcacccacatctacagtgccctggaccagacggcccgcaagatcaac
ctcgctaagttcacccacaacaagtgctctgccctcatcgtgacagacctggcggcccgt
ggcctggacatcccgctcctggacaatgtcatcaactacagctttcctgccaagggcaag
ctcttcctgcaccgtgtgggccgcgtggcgcgtgccggccgaagtggcacagcctactcc
ttggtggccccagacgaggtcccctatctgctggacctgcacctgttcctcggccgtgcc
ctcactcctgcccgcccccatgagggttccttaggtgtggatggtgtgctgggccgcgtg
ccacagagcgtggtggacgatgaggagagtggcctacagagcatcctgacgtcatcgctg
gagctggggggcctgagccgggtggctgacaatgcccagcagcagtatgtgcgctcccgg
cctgcgccctcgcctgagtccatcaagagggccaaggagctggacctcacagggctgggc
ctccaccccctcttcagctcacgctttgaggagaaggagctgcagcggctgaagctggtg
gacagcatcaagaactaccgctcgcgggcgaccatctttgagatcaacgcctccagtcgg
gacctgagcagccaggtgatgcgcgccaagcggcagaaggaccacaaggccatcgccagt
ttccagcagggacgacgagggcgacaggaggacacagctggcccagccccaggctgcccg
gcaccccaggaagagaagcccgaggaggacgaggaggaggaggcagcaggaaagagtata
gaggatgtcttcactgaggtcatgggccggaagcggcaacagccaggacctgaaggggga
gccaagaggcggagggaggaggcccggcatcgggacctggagttctatgtcccctaccgg
cccaaggactttgacagcgagcggggcctgagcatcagtggggatgggggtgcatttgag
cagcaggtggctggcgccgtcctggacctgatgggggacgaagcccagaacctgaccagg
ggccggcagcagctcaagtgggaccggaagaagaagcggtttgtgggacagtcaggacag
gaagacaagaaaaagatcaagacagagagtgggcgctacatcagcagctcctacaaacgg
gacctctaccagaagtggaaacagaaacagaaaattgatgatcgtgactcagaagaggaa
ggaacatcccaccagcgaggcccagagcgaagaggtggaaagcggggcagaggccaaggt
gcagcccagccccgcagcccaggcgcccctgcaggccgcgtgcgctcagagctcaagacc
aagcagcagattctgaaacagcggcgccgcgcgcagaagttgcgcttcctgcagcgtggg
ggcctgaagcagctctctgcccgcaaccggcgccgtgcccaggagctgcagcggggcgcc
tttggccggggcgccccctccaagaagggcaagatgaggaagaggatgtga
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