Nyctereutes procyonoides (raccoon dog): 129509095
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Entry
129509095 CDS
T09008
Symbol
NPC1
Name
(RefSeq) LOW QUALITY PROTEIN: NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
npo04142
Lysosome
npo04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129509095 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
129509095 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
129509095 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
npo02000
]
129509095 (NPC1)
Transporters [BR:
npo02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
129509095 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
129509095
NCBI-ProteinID:
XP_055180480
LinkDB
All DBs
Position
Unknown
AA seq
1276 aa
AA seq
DB search
MTARRPAVGLLLLLLCPAQVFAQSCVWYGECGIASGDKRYNCQYSGPPKPLPKDGYDLMQ
ELCPGFFFDNVSVCCDVQQLRTLKDSLQLPLQFLSRCPSCFYNLMNLFCELTCSPRQSQF
LNVTETEDYVDPVTNQTKTNVKELQYYVGESFANAMYNACRDVEAPSSNDKALGLLCGKE
AKACNATNWIEYMFNKDNGQAPFTIIPIFSDLPAHGMEPMNNATKGCDEPVDEVTAPCSC
QDCSVVCGPKPQPPPAPAPWRILGLDAMYVIMWITYMAFLLMFFGAFFAVWCYRKRYFVS
EYTPIDSNIAFSVNAGDTGEASCCDALGAAFEGCLRRLFTQWGSFCIRNPGCIIFFSLAF
IAACSSGLVFGRVTTNPVDLWSAPGSQARLEKEYFDAHFGPFFRTEQLIIQAPHTSVHTY
QPYPSGSDVPFGPPLDIGILHQVLDLQTAIENITATYNNETVTLQDVCVAPLSPYNKNCT
IMSVLNYFQNSHSMLDHKIGDDFYVYADYHTHLLYCVRAPASLNDTSLLHDPCLGTFGGP
VFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVKNYENPNLT
ISFTTERSIEDELNRESNGDVFTVLISYAVMFLYISIALGHIKSCSRFLVDSKISLGIAG
ILIVLSSVMCSLGIFSYFGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQGESL
EQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSQMPAVHTFSLFAGMAVLIDFLLQITCFV
SLLGLDLKRQEKNRLDVLCCLTGSEGGTGIQASESCLFRFFKNSYSPFLLKDWMRPIVIA
VFVGILSFSIAVLNKVEIGLDQSLSMPDDSYMMDYFKSLKYLHAGPPXYFVLEEGHDYTS
LEGQNMVCGGMGCNNDSLVQQIFSAAQLDNYTRIGFAPSSWIDDYFDWVKPQSSCCRVYN
STDQFCNASVVDPACVRCRPLTQEGKRRPQGEDFMRFLPMFLSDNPNPKCGKGGHAAYSS
AVNLVGNDTSVGATYFMTYHTVLQTSADFTDAMRKAILIASNITKTMSLKGSHYRVFPYS
VFYVFYEQYLTIIDDTIFNLSVSLGAIFLVTLVLLGCELWSAVIMCVTIAMILVNMFGVM
WLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSAKGSRVERAEEALSHMGSSVFSGI
TLTKFGGIVVLAFAKSQIFQVFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSINKAKSLA
SQERYKGTEREQLLNF
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccgccgcccagccgtcggcctcctgctgctgctgctctgccccgcgcaggtg
tttgcacagtcctgtgtatggtatggagagtgtggaattgcatctggagacaagagatat
aactgccaatattcggggccaccaaaacccttgccaaaggatgggtatgacttaatgcag
gagctctgtccaggattcttctttgacaatgtcagcgtgtgctgtgacgtgcagcagctc
cggaccctgaaggacagcctacagcttcccctgcagttcctgtccagatgtccatcctgt
ttttataacctaatgaacctgttttgcgagctgacatgtagccctcggcaaagtcagttt
ctgaatgttacagaaactgaagattatgttgatcctgttacaaaccagacaaaaacgaac
gtaaaagaattacagtactatgtcggagagagttttgccaatgccatgtacaacgcctgc
cgggacgtggaggccccctccagtaatgacaaagccctgggactcctgtgtgggaaggag
gccaaggcctgcaatgccaccaactggatcgagtacatgttcaataaggacaacggccag
gcacctttcaccatcatacccatattttcagatcttccagcccatgggatggagcccatg
aacaatgccaccaagggctgtgacgagcctgtggatgaggtcacggcaccgtgcagttgc
caagattgctcggtggtctgtggccccaagccccagcccccacccgctccggctccctgg
agaattttgggcctggatgccatgtatgtcatcatgtggatcacctacatggcatttttg
ctcatgttttttggagcattttttgctgtgtggtgctacagaaaacgctattttgtctct
gagtacacccccattgatagcaacatagctttctctgtaaatgccggtgacacaggggag
gcgtcctgctgcgatgcacttggtgcagcatttgagggctgcctgaggcggctcttcaca
cagtggggctccttctgcatccgaaacccaggctgcatcatcttcttctccctggccttc
attgctgcctgctcttcaggcctggtgttcggccgggtcacgaccaacccagtggacctg
tggtcggcccctggcagccaggcacgcctggagaaagagtactttgatgcgcacttcggg
cctttcttccgcacggagcagctcatcatccaggccccccacaccagtgtgcacacttac
cagccgtacccctcaggatccgacgtgccctttgggcccccgcttgacataggaatcttg
caccaggttctagacttacaaaccgccattgaaaacatcaccgcaacttacaacaacgag
actgtaacacttcaagacgtctgtgtggccccactctcaccctataacaagaactgcacc
attatgagcgtgttaaattacttccagaacagccattctatgctggaccacaaaataggg
gatgacttctatgtgtatgcagattaccacacgcacttgctatattgtgtacgggctcct
gcatctctgaatgataccagtttgctccatgatccttgcctgggtacatttggtgggcca
gtgttcccgtggcttgtgttaggaggctatgatgatcaaaactacaataatgctacagcc
cttgtgattacctttcctgtcaataattactacaatgatacagagaagctccagagggcc
caggcctgggaaaaagagtttattaattttgtgaaaaactacgagaatccaaatctgacc
atttctttcacaactgagcgaagtattgaggatgaactgaatcgggaaagtaatggtgat
gtcttcactgttctgatcagctatgccgtcatgtttctgtacatttccatagccttgggg
cacatcaaaagctgtagcaggtttctagtggattctaaaatctcccttggcatcgctggg
atcctcattgtgttgagctcagtgatgtgctcattgggcatcttcagctactttgggatc
cccctcaccctcatcgtgatcgaagtcatcccattcctggtgttggctgttggggtagac
aacatcttcattctggtccaaacctaccagcgcgatgaacgtcttcaaggagaatctctg
gaacagcagctgggcagggtcctaggagaagtggctcctagtatgttcctgtcctccttt
tcagaggctgtagcatttttcttaggagccttgtcacagatgcccgcagtgcacactttc
tctctgtttgccgggatggcggtcctcattgacttccttcttcagattacctgttttgtg
agtctcttggggttagaccttaagcgtcaagagaaaaatcgcctggacgtcctttgctgt
ctcacaggctctgaaggtggaaccggcatccaggcctcagaaagctgcttatttcggttc
ttcaaaaactcctactccccatttctgcttaaggattggatgcggcccattgtgatagcg
gtatttgtgggcattctctcattcagtatcgcagtcctgaacaaagtggagattggattg
gatcagtctctttcaatgccagatgactcctacatgatggattatttcaagtccctcaaa
tacctgcatgcaggtcccccgntgtactttgtcctggaagaaggacacgactacacctct
ttggaagggcaaaacatggtgtgcgggggcatgggctgcaataatgactccctggtgcag
cagatcttcagcgcggctcagctggacaactatacccgcataggctttgcgccctcgtcc
tggatcgacgattattttgattgggtcaagcctcagtcttcctgctgtagagtctacaac
agcacagatcagttctgcaacgcctcagtggtcgaccctgcctgcgtccgctgcaggcct
ctgacccaggagggcaaacggaggcctcagggtgaagacttcatgagattcctgcccatg
ttcctttctgataacccaaaccccaagtgcggcaaagggggacatgctgcctacagctca
gcagttaacctcgtcggcaatgacacgagcgtcggagccacttacttcatgacctaccac
accgtgcttcagacctctgctgactttactgacgccatgagaaaagccatcctcattgcc
agtaacatcaccaaaaccatgagccttaaaggaagccactaccgcgtgttcccatacagt
gtgttctatgtcttctacgaacagtacctgaccattattgatgacacgatctttaacctc
agcgtgtcactgggagccatcttcttggtgaccttggttctcctgggctgtgaactgtgg
tctgcagtgatcatgtgtgtcaccattgccatgatcttggtcaacatgtttggcgtcatg
tggctgtggggcatcagtctgaacgcggtttccttggtcaacctggtcatgagctgtggc
atctccgtggagttctgcagccacataacgagagcgttcacagtgagtgcgaagggcagc
cgcgtggaacgggccgaagaggcgctctctcacatgggcagttctgtgttcagtggaatc
acactaacgaaatttggagggattgtggtgttggcctttgccaaatctcagattttccag
gtattttacttcaggatgtatctggctatggtcttgctgggagccacgcacggcttgata
ttcctccctgtgttactcagctacataggcccgtcaataaataaagccaaaagtttggcc
tcccaagagcgatacaaaggtacagagcgagagcagctcctgaacttctag
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