Nyctereutes procyonoides (raccoon dog): 129509573
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Entry
129509573 CDS
T09008
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03440
Homologous recombination
npo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
129509573 (BRIP1)
03460 Fanconi anemia pathway
129509573 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npo03400
]
129509573 (BRIP1)
Enzymes [BR:
npo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
129509573 (BRIP1)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
129509573 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
129509573 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ARCH_RTEL1
HBB
Motif
Other DBs
NCBI-GeneID:
129509573
NCBI-ProteinID:
XP_055181268
LinkDB
All DBs
Position
Unknown
AA seq
1247 aa
AA seq
DB search
MSSVWSEYTIGGVKITFPYKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCST
LAWQQSLSGKLVDESLSKTEVSSSCRCACHSKNFTNIDLNQGTSHHFNSPSTPPSERYDT
SSTCQDSPEKTTLAAKLSAKKQASIKRDENDDFQVEKKRIRPLETTQQIRKRHCFEKEVH
HVDAKVASGKTTKLNSPLEKINSFSPQNPPGHCSRCCCSTKQGSGQDSSNTTKKDHGGKS
KIPKIYFGTRTHKQIAQITRELRRTVYSGVPMTILSSRDHTCVHPEVVGNFNRNEKCMEL
LDGKNGKSCYFYHGVHKISNQHTLQTLQGMCKAWDIEELVSLGKKLKACPYYTARELIED
AHIIFCPYNYLLDAQIRESMDINLKEQVVILDEAHNIEDCARESASYSVTEVQLRFARDE
LDSMVNNNIRKKNHEPLRAVCYSLINWLEANSEHLVERDYESSCKIWSGSEMVLNLHKMG
ITTATFPILQGHFSAVLQKEEKVLPIHGKEETREVPIISASTQIMLKGLFMVFDYLFRQN
SRFADDYKVAIQQTYSWINQTDTSDKNGFFAPAKNKKHLRQKTAVHVLNFWCLNPAVAFS
DINGKVLTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNSQVWVGTIGSGPKGRNLC
ATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLYTGLWHNLELVK
TVIVEPQGGEKTDFDELLQVYYDAVKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVIT
IGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKNDWGA
LILVDDRFRSNPSRYISGLSKWIRQQIQHHLTFESALESLSEFSRKHQKVINVSKEDRKF
TQDSESILEVTCLKDNTLTYLEAASPLTPENPRKGEAKIRVQEQQCLTITESPPLPRGII
SKKERDDPVLSEEFAQSVKAEKNVISRSTSPIFNKQTTPVSWSNFNSLGHYFTGEILTAG
PKFRSPEDCASSISTLETEEGYKTVLPLTDKCESSSLMLNASCSQSEVISSIKIDSTLLK
RNYSKQLFCCEEAVDPDIELSLVGEEAKFSTSHRASETEAADESIYFSPELYDPVDTNEE
KNELVESDRDNRFVDHSNCILVEDLFEIRTSKGVDSVQEMKAEDCTVTTLNRLMHIKESK
IDNIDSNMKKTRINELELGKTCETDIKSFNQLPSKNKGVFLVLDSNT
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagtgtggtctgaatatacaattggtggggtgaagattacctttccttataaa
gcttacccatcacagcttgctatgatgaattctattgtcagaggattaaacagtaagcaa
cattgtttgttggagagtcctacaggaagtgggaaaagcttagccttactttgttctact
ttagcatggcaacagtctcttagtgggaagctagtggatgaaagcttaagtaaaactgaa
gtatcatcgtcatgtcgttgtgcatgccattcaaagaattttacaaacattgacttaaac
caaggaacttcacatcatttcaacagtccgagtacaccaccttctgaaagatatgacact
tcatcaacttgtcaagactctcctgaaaaaaccacactggctgcaaagctatctgccaag
aaacaggcatccataaaaagagatgaaaatgatgattttcaagtagagaagaaaagaatt
cgacccttagaaaccacacagcagattagaaagcgtcattgttttgaaaaggaggtacat
catgtggatgcaaaagttgcttcaggaaagaccacaaaactcaactctccattagaaaag
ataaactccttttctccacaaaatccccccggtcactgttccaggtgttgttgttctact
aaacaaggaagcggtcaagattcctcaaataccactaagaaggatcatggcgggaaatcc
aagatacccaaaatatattttgggacacgcacacacaaacagattgctcagattactaga
gagctccggaggacagtatactcaggggtcccaatgactattctttctagcagggaccat
acttgtgttcatcctgaagtagtaggtaacttcaacagaaatgagaagtgcatggaattg
ctggatggaaaaaatggcaaatcctgctatttttatcatggtgtacataaaattagcaat
caacacacattacagactctgcaagggatgtgcaaagcctgggatatagaagaacttgtc
agcttgggaaaaaaactaaaagcatgtccgtattacacagcacgagaactaatagaagat
gctcacataatattttgtccttacaactatcttctagatgcacaaataagggaaagtatg
gatatcaatctgaaagaacaggttgtcattttagacgaagctcataacattgaagactgt
gctcgggaatcagcaagttacagtgtaacagaagttcagcttcggtttgctcgagatgaa
ctagatagcatggtcaacaataatataaggaagaaaaaccatgaacccttacgagctgtg
tgctatagcctaattaattggttagaagcaaactctgaacatcttgtggaaagggattat
gaatcatcgtgtaaaatatggagtggaagtgaaatggtcttaaatttgcacaaaatgggc
attactactgctacttttcctattttgcagggacacttttctgctgtccttcaaaaagaa
gaaaaagtcttaccaattcatggtaaagaagagacaagagaagtgccgattattagtgct
tcaactcagataatgctcaaaggactttttatggtgtttgactatctttttaggcaaaat
agcagatttgcagatgattataaagttgctattcaacagacttattcttggataaatcag
actgatacttcagataaaaatggattctttgctccagcaaaaaataaaaaacatttaaga
cagaaaactgcagttcatgtgttaaacttttggtgcttaaatccagctgtggccttttca
gatattaatggcaaagttttgacaattgttttgacatctggaacattatcaccaatgaaa
tccttttcatcagaacttggtgttacatttactatccaactggaggctaatcatgtcatt
aataactcacaggtttgggtgggcaccattgggtcaggccccaagggtcggaatctctgt
gctaccttccagcacacagaaacatttgaattccaggatgaagtgggagcacttttgtta
tctgtgtgtcagactgtgagccaaggaattttgtgtttcttgccatcttacaagttacta
gaaaagttaaaagaacgttggctctacacgggtttatggcataatctagaattggtgaag
acagtcattgtagaaccacaaggaggagaaaaaactgattttgatgaattattgcaagtg
tactatgatgcagtcaagtacaaaggagagaaagacggagccctcttggtagcagtttgt
cgtgggaaagtgagcgagggcctggatttctcagatgacaatgcccgtgctgtcataaca
ataggaattccttttccaaatgtgaaagatctacaggttgaactaaagcgacaatacaat
gatcagcactcaaaattgagaggtcttttacctggtcgtcagtggtatgaaattcaagca
tatagggccttaaaccaggccctaggtaggtgtattcgacacaaaaatgattggggagct
cttattctagtggatgatcgcttcaggagtaatcccagtagatatatatctggactttcc
aaatggatacggcagcagattcagcaccacttaacctttgaaagtgcactggagtccttg
tctgaattttccagaaagcaccaaaaggtcattaatgtatccaaagaggacagaaagttt
acacaagacagtgagtctatacttgaagtgacctgtttgaaggacaatacattaacttac
ttagaagcagcaagtcctctaacaccagaaaatcctaggaaaggtgaagcaaaaatacgt
gtccaagaacaacagtgtcttacaataactgaaagtccacctctaccaagaggcatcatc
tccaaaaaggaaagagatgatcctgtattatcagaagagtttgcccagtcagtcaaagca
gaaaaaaatgtgatttccagatccacaagcccaatcttcaacaaacaaacaacgccagtt
agctggtctaactttaattctttgggacattattttactggtgaaattctgactgcagga
cctaagttcaggtcaccagaggactgtgcctctagcatttccactttagaaacagaagag
ggttataaaacagttttgccactcactgataaatgtgaatcctcatctctgatgttaaat
gcatcatgctctcaatcagaagtcatttcatcaataaagattgattctactcttcttaaa
agaaattattccaaacaactattttgctgtgaagaagccgtggatccagacattgaattg
tctctagttggtgaagaagctaaattttccacttcacatagagcttctgaaacagaagca
gcggatgaatctatctatttttcacctgagctttatgatcctgtagatacaaatgaagaa
aagaatgaactagttgaaagtgatagggacaatagatttgttgatcattcaaattgtatt
ttagttgaagatctttttgaaattagaactagtaagggagtggattcagtccaagaaatg
aaagctgaggattgcacagtcacaacgttgaatagactcatgcatattaaagaaagtaaa
attgataacattgatagtaatatgaaaaaaactcgtataaatgaattggaactaggaaaa
acttgtgaaacagatataaagagctttaatcagttgccttccaaaaataaaggtgtgttc
ctggtgttagatagtaatacttaa
DBGET
integrated database retrieval system
