Nyctereutes procyonoides (raccoon dog): 129509881
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Entry
129509881 CDS
T09008
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
129509881 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
npo00536
]
129509881 (COL13A1)
Glycosaminoglycan binding proteins [BR:
npo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129509881 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129509881
NCBI-ProteinID:
XP_055181749
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MPGRVGVKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGYPGPKGE
MGLMGPRGQPGPPGQKGEKGQCGEYPHREHLSSTLSALRSNQIITLKGEQGQAGIQGPPG
PPGPPGPSGPLGYPGLPGPMGPPGLPGPPGPKGDPGIQGYHGRKGERGMPGMPGKQGAKG
TPGIAVAGMKGEPGTPGAKGEKGTAGPPGLLGLLGQKGEKGDAGNSIGGSRGEPGPPGLP
GPPGPKGEAGVDGQAGPPGQQGDKGEPGAAGEQGPAGPKGTKGEPGKGEMVDYNGNINEA
LQEIRTLALMGPPGLPGQIGPPGAPGIPGQKGEIGLPGPPGHDGEKGPRGKPGDMGPPGP
QGPPGKSGPAGMKGEDGHTGSPGEKGEKGETGQAGAPGLDGPTGEKGEPGGQGRPGATGL
PGPIGLPGFTGEKGEPGEKGEPGLEVPGPPGPEGPPGPQGLQGVPGPKGEAGLDGAKGEK
GAQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAGPKGERGSKGDLGMTGPTGAA
GLPGLHGPPGDKGNRGHRGFKGEKGEPGLPGLDGLDAPCPLGEDGLPVQGCWNK
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcctggacgtgtgggagtaaagggccaaccaggcgagaagggggccccaggagatgcc
ggcatgtccatcatcggcccccgcggcccccctggtcagccgggcactcgaggttttcct
ggatttccgggtcccattgggctagacggcaaaccgggctaccccggacccaaaggggag
atgggcctgatgggtccccgaggacagccgggacctccaggacaaaaaggagaaaagggg
cagtgtggagagtacccacatcgggagcacctgagcagcaccctttcggctctacgctcc
aaccagatcattaccctgaagggtgaacagggccaggccggtatccaaggcccaccaggg
ccaccaggcccccctggaccaagcggacctctggggtacccgggactgccagggcccatg
gggccacccggcttacccgggcctcctggaccaaagggagacccaggaatccagggctac
cacggtcggaagggagaacgaggcatgccagggatgccgggcaaacaaggagcaaaggga
actcctggaattgctgtggccgggatgaagggtgagccagggaccccaggagccaagggc
gagaaggggactgcaggcccccccgggctactcggcctcctggggcagaagggagaaaaa
ggtgatgctggcaactccattggaggaagcagaggggagccgggccccccagggctcccg
gggcccccaggtccaaagggagaagctggtgttgatggccaggccggccccccaggacag
caaggagacaagggggagcccggagcagctggagaacagggaccagctggccccaagggc
accaagggggagccagggaaaggagagatggtggactacaacgggaacatcaatgaggcc
ctccaggagatccgaacgctggccttgatggggccccctggtcttcctgggcaaatcggc
ccacccggagccccagggatcccaggccagaagggcgagatcggactcccaggccctcca
ggacacgatggggaaaagggacctcgaggcaaaccaggagacatgggcccccccggcccc
caaggccccccaggaaagtctggacctgcaggaatgaagggagaagacggacacacaggg
agcccaggagagaagggggagaaaggggagacgggacaggcaggcgcaccgggtctagac
ggcccaactggggagaaaggagaaccaggtggccaagggagacccggagcaacaggattg
cccggccctatcgggctcccgggatttacaggagagaaaggagagcccggggagaagggt
gagccaggactggaggttcctgggcctccagggccagaggggccccctggaccccagggg
ctccaaggtgttcctggaccaaagggggaagcaggacttgatggagcaaaaggagagaag
ggtgcccagggagagaaaggagatcgggggccactgggattacccggagcttcaggtttg
gacggcaggcctgggccaccgggtacgccaggaccaatcggagttccaggcccagcggga
ccaaagggcgagaggggcagcaaaggtgaccttgggatgacaggaccaacaggagcagct
gggcttcctggtttacacggaccacccggggacaaaggaaaccggggacaccgaggtttt
aaaggagagaaaggggagccggggttaccagggctggacggactggatgccccatgccca
ttgggtgaagacggcttaccggtccagggctgttggaacaagtga
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