Nyctereutes procyonoides (raccoon dog): 129510167
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Entry
129510167 CDS
T09008
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03030
DNA replication
npo03410
Base excision repair
npo03420
Nucleotide excision repair
npo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129510167 (RFC1)
03410 Base excision repair
129510167 (RFC1)
03420 Nucleotide excision repair
129510167 (RFC1)
03430 Mismatch repair
129510167 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npo03032
]
129510167 (RFC1)
03400 DNA repair and recombination proteins [BR:
npo03400
]
129510167 (RFC1)
DNA replication proteins [BR:
npo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
129510167 (RFC1)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
129510167 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
PTCB-BRCT
BRCT_2
Rad17
RuvB_N
AAA_30
AAA_17
AAA_33
AAA_14
AAA_5
AAA_18
SKI
AAA_16
nSTAND3
Zeta_toxin
RNA_helicase
AAA_19
AAA_7
NTPase_1
NPHP3_N
TIP49
Motif
Other DBs
NCBI-GeneID:
129510167
NCBI-ProteinID:
XP_055182106
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MDIRKFFGVIPSGKKPVTETVKKNEKTKSAEETLKSKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQIKNAKKQPEKLPLASKPGKILRQDPVTYISETDEEDDFMCKK
AASKSKENGGSTHSYLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKK
MVASKRKEPSQNADDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKK
AWKDPEERETFSSVQANLSKAGKHKSPHKVKTEQFSDGRKNCSPKKQTKCESLIGSQQHL
KSSPHKIETSPKASSKLALLKKKGESSYKETEPMTSKRKNAVELKGQTKTPKKPKSSPAK
KESISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIER
DEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTMP
GKKSKYEIAVEAEMKKEKSKLERTPQKKDQGKRKISPTKKESESKRSRLTPKKDSSIKSV
KKETSVLWRCLNFEEQVAEETNDDSRARNLAGDSSENKVENLLWVDKYKPTSLKTIIGQQ
GDQSCANKLLRWLQNWHRGPSEDKKRAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTAS
LVCQELGYSYVELNASDTRSKNSLKEVVAESLNNTSITGFYSTSQHGSDGAVHSVGSKHA
LIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPR
VEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKAD
SHRAKKDIRLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYLHVKPVA
AGGDMKKHLMLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQF
PTFPSWLGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGVE
GVQDVIALMDAYYLMKEDFENIMEISSWGGKPSPFFKLDPKVKAAFTRTYNKEVHLTPYS
LQAVKTPRHSTGPALDSEYNEELIEDDSQSDEKDQDSMETDGMIKKKTKSSKPSKSEKDK
ESRKGKGKSSKK
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacctgtaaccgaaaca
gtaaagaagaatgagaaaacaaagtctgctgaagaaactttaaaatcaaagaaaggaata
aaggaaattaaggtaaatagttcttgtaaagaagatgactctaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatcagaggagacagtgcagattaaa
aatgccaaaaagcaaccagaaaaattgccattggcctctaaacctggtaaaattctacgc
caggatcctgttacatatatttcagaaacagatgaagaagatgactttatgtgtaagaag
gcagcttctaaatcaaaagagaatggaggatctacacatagttatcttgggacatcaaac
atgaaaaagaatgaagaaaacactaagaccaagaataaacctttatcaccaataaaactt
acccccacgtcagtgcttgattattttggaactgggagtgtccaaagatcagataagaag
atggtagcaagcaaaagaaaagagccttcacaaaatgcagatgattccagattaaatgat
gaagccattgccaagcaattgcaacttgatgaggatgcagagttggagagacaactgcat
gaagatgaagagtttgccagaacattagctatgttggatgaagagcccaagaccaaaaag
gcttggaaggacccagaggagcgagaaacgttttcatctgtccaagccaatttaagtaaa
gcaggaaaacataaatctcctcataaagtaaaaacagaacaattttcagatggcaggaag
aactgtagtcctaagaagcaaactaaatgtgaaagtttgataggatctcagcaacatttg
aagtcatcacctcacaaaatagaaacttctccaaaagccagttccaagttggcccttttg
aaaaaaaaaggagagagttcttataaagaaacagagcctatgacttcaaaaagaaaaaat
gctgttgaattaaaaggacagacaaagactcctaagaaacccaaaagttctccagctaaa
aaagagtctataagtcctgaagattctgagaagagacgcacaaattatcaagcttatcga
agctacttaaatcgagaaggccccaaagccctgggctccaaagaaataccaaagggagct
gaaaattgcttggaaggccttacatttgtaatcacaggagtgctggagtccatcgaacga
gatgaggccaagtctctaattgagcgttatgggggaaaagtaacaggaaatgtcagcaag
aaaacaaactaccttgtcatgggtcgtgatagtggacagtccaagagtgataaggcagca
gccttggggacaaatattattgatgaagatggcctattaaatctgattcgaaccatgcca
ggcaagaagtctaagtacgaaatagcagttgaagctgagatgaagaaagaaaagtccaaa
ttggaaagaacacctcaaaaaaaagaccaaggaaaaagaaaaattagcccaactaagaag
gaatcagaatctaaaagaagtagacttactcccaagaaggacagctctataaagtcagta
aaaaaggaaacaagtgtgctttggagatgcctgaactttgaggagcaggtggctgaggag
acaaatgacgacagccgggctaggaatttggccggtgacagcagtgaaaacaaagtggaa
aatttgctctgggtggataaatataagccaacttctctcaagaccataattggacagcaa
ggtgaccagagctgtgccaacaagctcctacgctggctccaaaattggcacaggggtccc
tctgaagacaagaaacgcgcagcaaagtttggtaagtttgctggcaaagatgatggctct
agttttaaagcagcgctgctctcaggccctccaggtgttggcaagaccaccacagcttct
ttggtttgtcaggaattgggatatagctacgtggaactgaatgcgagtgacactcggagt
aagaatagtttgaaggaggttgttgctgaatcactgaataataccagcatcacaggcttt
tattcaacttctcaacatgggtcagatggagcagtccattcagtaggctcgaaacatgct
cttatcatggatgaagtagatggcatggcaggcaatgaggacaggggaggaattcaggaa
ttaattggcctgataaaacatacaaaaattcccattatttgcatgtgcaatgatagaaat
catcctaagattcgttctttggttcattattgttttgatcttcgttttcaaagacctcga
gttgaacagattaagggtgctatgatgtctattgcatttaaagagggtttgaagatcccg
cctccggctatgaatgaaataattttgggagccaatcaagatatcagacaggttttacac
aatctgagtatgtggtgtgcacgcagtaaggcactaacctatgaccaggccaaggctgat
tctcatagagccaaaaaggatatcagactgggcccgtttgatgttgcccggaaagtgttt
gcagctggagaggagactgctcacatgtcacttgtggataagtcagatctcttttttcat
gattattcaatagcacccctcttcgtccaggagaactacttacatgtgaaacctgtagct
gcagggggcgacatgaaaaagcacttgatgcttttaagcagagcagcagatagcatatgt
gatggtgacctagtggaccgtcagatccggagtaagcaaaactggagtcttctgcctaca
caggccatttatgccagtgttcttcctggagagctaatgagggggtacatgacccagttt
cctactttcccaagctggttagggaagcactcatctaccggcaaacacgatcgtattgta
caggatctagcactgcacatgagtctcagaacttattccagcaaaaggactgtaaacatg
gattatctgtcacatataagggatgcacttgtacagcccttgacctcacaaggggtagaa
ggagtacaggatgttattgctcttatggatgcctactacttgatgaaagaagacttcgag
aatatcatggaaattagcagctggggagggaaacctagtcccttcttcaagctggatccc
aaggtgaaagcagccttcacaagaacctacaataaggaagtccaccttactccatattca
cttcaagcagtaaagacacccagacacagcacaggcccggcactggattctgaatacaat
gaagagttaattgaagatgactctcaatctgatgagaaagaccaagactctatggaaact
gatggaatgatcaagaagaagacaaaatcttcaaagccttcaaaatcagaaaaagataag
gagtccagaaaaggaaaaggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
