KEGG   Nyctereutes procyonoides (raccoon dog): 129510360
Entry
129510360         CDS       T09008                                 
Symbol
SKIC8
Name
(RefSeq) SKI8 subunit of superkiller complex protein
  KO
K12602  WD repeat-containing protein 61
Organism
npo  Nyctereutes procyonoides (raccoon dog)
Pathway
npo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:npo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129510360 (SKIC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:npo03019]
    129510360 (SKIC8)
Messenger RNA biogenesis [BR:npo03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     129510360 (SKIC8)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR19_1st eIF2A Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Tricorn_2nd Beta-prop_HPS5 Ge1_WD40 Beta-prop_Nup120_160 PROPPIN Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 WD_LRWD1 Beta-prop_DCAF12 VPS8_N WDR54 Beta-prop_RIG_1st WD40_like GSDH Beta-prop_IFT122_2nd Nucleoporin_N DUF2415 Vgb_lyase
Other DBs
NCBI-GeneID: 129510360
NCBI-ProteinID: XP_055182451
LinkDB
Position
Unknown
AA seq 305 aa
MTNQYSILFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWCDERLDLQWSL
EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLDNGKQIKSIDAGPVDAWTLAFSPDSQY
LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF
CPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHV
YDCPV
NT seq 918 nt   +upstreamnt  +downstreamnt
atgaccaaccagtacagtattctcttcaaacaagaacaagcccatgatgatgccatttgg
tcggttgcctgggggacaaacaagaaagaaaactctgagacggtggttacggggtccctg
gatgacctggtgaaagtctggaagtggtgtgatgagaggctggacctacagtggagtcta
gagggacatcaactgggcgtggtgtctgtggacatcagccatacactgcccatcgctgca
tccagttctcttgacgctcatattcgtctctgggacttggataatggcaaacagataaaa
tctatagatgcaggaccagtggatgcctggactttggccttttctcctgattcccagtat
ctggccacaggaactcatgtggggaaagtgaacatttttggtgtggaaagtgggaaaaag
gaatattctctggacacgagaggaaaattcattcttagtattgcatatagccctgatggg
aagtatctggccagtggagccatagatgggatcatcaatatttttgatattgcaactgga
aaacttctgcacacgctagaaggccatgctatgcctatccgttccctgacattctccccg
gattctcagctcctggtcactgcatcagatgatggctacatcaagatctatgatgtacaa
catgccaatttggctggcacgctgagtggccatgcatcatgggtgctgaatgttgcattt
tgtcctgacgacacccactttgtgtccagttcatctgataaaagtgtgaaagtttgggat
gttggaacaagaacctgtgttcacaccttcttcgatcaccaggatcaggtctggggagta
aaatacaatggaaatggctcaaagattgtgtccgtgggtgatgaccaggaaatccacgtc
tatgattgccccgtgtaa

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