Nyctereutes procyonoides (raccoon dog): 129510518
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Entry
129510518 CDS
T09008
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo05016
Huntington disease
npo05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
129510518 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
129510518 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129510518 (HTT)
04131 Membrane trafficking [BR:
npo04131
]
129510518 (HTT)
03029 Mitochondrial biogenesis [BR:
npo03029
]
129510518 (HTT)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129510518 (HTT)
Membrane trafficking [BR:
npo04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
129510518 (HTT)
Mitochondrial biogenesis [BR:
npo03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
129510518 (HTT)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_2
HEAT_GCN1
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
129510518
NCBI-ProteinID:
XP_055182724
LinkDB
All DBs
Position
Unknown
AA seq
3131 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQQQQTPPPPPPQPSQPLPQAQPPLPQPPPPPPPPPP
PGPAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLC
SDDAESDVRMVADECLNRVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAALWRFAELAH
LVRPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAF
IANLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVEGEHSTLLILGVL
LTLRYLVPLLQQQVKDTSLKGSFGVTRKELEVSPSTEQLIQVYELTLHYTQHQDHNAVTG
ALELLQQLFRTPPPELLQALSTPGGGLLNATQQQPGCRSRSSSIVELLAGGGSSCSPVLS
RKQKGKVLFGEAAALDDDSESRSEGSSPAFTASVKGEIGGELAASSGVSTPGSASSATDS
VGHDIITEQPRSQHTLQPDSVDLTSCDLASAATDGDEEDILSHSSSQISAVPSDPAMDLN
DGTQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYSGMQIGQPQDEDEEAAGIL
PDEDADAFRTSSVALQQAHLLKSMGHSRQPSDSSIDKFVSRDEATEPGDQENKPCRIKGD
IGQSTDDDSVPLVHCVRLLCASFLLTGEKNVLVPDRDVRVSVKALALSCVGAAVALHPES
FFSKLYKVPLDTMEYPEEQYVSDILNYIDHGDPQVRGATAVLCGTLISSILSRSRFQVGD
WMGTVRTLTGSTFSLADCVPLLQKTLKDESSVTCKLACTAVRHCVMSLCSSSYSELGLQL
ITNVLTLRDSSYWLVRTELLETLAEIDFRLVSFLETKAENLHRGTHHYTGLLKLQERVLH
DVVIYLLGDEDPRVRHVAAAALMRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHEA
QPPSHFSVSTITRIYRGYNLLPSMTDVTVENNLSRVIAAVSRELVTSTTRALTFGCCEAL
CLLSSAFPVCIWSLGWHCGVPPLSTSDESRKSCTVGMATMILTLLSSAWFPLDLSAHQDA
LVLAGNLLAASAPKSLRSSWTSEEEANPAASKQEEVWPALGDRTLVPMVEQLFSHLLKVI
NICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEPASVPLSPKKGSEASPA
SRQSDAPGPVTANKSSSLGSFCHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRS
ALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPVMATVCVQQLLKTLFGTNLASQFD
GLSSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRTMVQTEQDHGTSG
WFDVLQKVSTQLKTNLTSATKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVL
DLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERY
HSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKE
VVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMLAKQQMHIDSHE
ALGVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMASVSTVQLWISGILAILRVLISQSTE
DIVLSRIQELSFSPYLISCPIINRLRDGDSTSIPEEHHEGKQMKTLPEETFSRFLLQLVG
ILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLFTVDSTD
GSFYGLERLNARVRAMVPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPRRRSLSSTKSL
SPQMSGEEEDPDAACKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLIN
LSHEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHFSQSGAVL
TLYVDKLLCTPFRVLARMVDTLACRRVEMLLAANLQSGMAQLPVEEVSRVQEYLQRSGLA
QRHQRLYSLLDRLRLATAPGSRGPSPPVTSHPLDGDGPLALEIVIPDKDWYLRLVKSQCW
TRSDSALLEGAELVNRIPPSDMSTFMMNSEFNLSLLAPCLGLGMREISGGQRSPLFEAAR
LVTLDRVTSLVQQLPAVHHVFQPFLPMEPTAYWSKLNDLFGDAVLYRSLTTLARALAQYL
LVFSKLPSHLQLPPEKERDTVKFVVMTLEALAWHLIHEQIPLSLDLQAGLDCCCLALQLP
SLWSVLSSPEMVTHACSLIHCVRFILEAVVVQPGDQLLSPERRVNMPKAARVDEVDPNTQ
NLAYITTACQMVAEMVESLPSVLALGHKRNSNTPAFLTSVLRNIVISLARLPLVNSYTRV
PPLVWKLGWSPEPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINALGWTSRTQFEETWATL
LGVLVTQPLVMEQEESPLEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQP
RNKPLKVLDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSLSPATTGAL
ISHDKLLLQINPERELGNMSYKLGQVSIHSVWLGNSITPLREEEWEEEEEEEADVPAPAS
PPTSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARRTPIILISEVVRSLLVVSDLF
TERTQFEMMYLTLTELRRVHPAEDEILIQYLVPATCKAAAVLGMDKAVAEPVSRLLETTL
RSSHLPSKVGALHGALYVLECDLLDETAKQLVPVISDYLLSNLKAAAHCVNIHSQQHVLV
MCATAFYLIENYPLDVGLEFSASIIQMCGVMLSGSEESTPSIIYHCVLRGLERLLLSEQL
CRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRTSDPSPTAPDSESV
IVAMERVSVLFDRVRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQF
MATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVSASTSPWVSA
VLPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGNPYHRLLT
CLRNVHKVTTC
NT seq
9396 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggaaaagctgatgaaggccttcgagtccctcaagtccttccagcagcag
cagcaacagcagcagcagcagcagactccgccgccgccacctcctcagccttctcagccg
ctgccgcaggcgcagccgccgctgccgcagccgcccccgccgcccccgcccccgccgccc
ccgggcccggcggtggccgaagagccgctgcaccgaccaaagaaagaactctcagctacc
aagaaggaccgcgtcaatcattgtctgacaatatgtgaaaacatagtggcacagtcactc
agaaattctccagaatttcagaaacttctgggcatcgctatggaactttttctgctgtgc
agtgatgatgcagagtcggatgtccggatggtggctgacgagtgcctcaacagagtcata
aaagccctgatggactctaatcttccgaggttacagttagaactctataaggaaatcaaa
aagaacggtgctccccggagcctgcgcgctgccctgtggaggtttgctgagctggctcac
ctggttcggcctcagaaatgcaggccttacttggtaaaccttttgccttgcctgactcga
ataagcaagagacctgaggaatctgttcaggagaccttggctgcagctgtacccaaaatt
atggcttcttttggcaattttgcaaatgacaatgaaattaaggttctattaaaggctttc
atagcgaatctgaagtcaagctccccaaccattcgacggacagcagctggctcagcagtg
agcatctgccagcactcaagaaggacacagtatttttacagctggctactaaatgtgctt
ttaggtttgctggtccctgttgagggtgaacactctaccctcctgattcttggagtgctg
ctcacactgaggtatctggtgcctttactgcagcagcaggttaaggacacaagcctgaaa
ggcagctttggagtgacacggaaagaactggaagtctctccctcaacagagcagctcatc
caggtttatgaactgaccttgcattatactcagcaccaagaccacaacgctgtgactgga
gcgctggagctcctgcagcagctgttccgcacgcccccgcccgagctcctgcaggctctg
agcacacccggtggcgggctgctcaatgccacgcagcagcagcctgggtgccggagccgc
agcagcagcatcgtggagctcctagctggagggggttcttcatgcagccctgtcctttca
agaaaacaaaaagggaaagtgctcttcggagaagcggcagccttggatgatgactccgag
tccaggtcggagggcagcagccccgccttcacagcctcggtcaagggtgagattggtggt
gagctggctgcctcttccggagtctctactcctggctctgccagttcagccaccgactcc
gtggggcatgacatcatcactgagcagccccggtcacagcacacactgcagccagactca
gtggatctgaccagctgtgacctggcgagtgctgccaccgatggggatgaggaggacatc
ttgagccacagctccagccagatcagtgctgtcccgtcggatccagccatggacctgaac
gatggcacccaggcctcctccccggtcagcgacagctcccagaccaccactgaagggccg
gattcagctgtgaccccctcagacagttctgaaattgtgttagatggtgctgacagccag
tattcggggatgcagattggacagccacaggacgaggatgaggaagccgcaggcattctt
ccagatgaggatgcagatgctttcagaacctcttcagttgcccttcagcaagcacattta
ttgaaaagtatgggccacagcaggcagccctctgacagcagtatagacaaatttgtctcc
agagatgaagctaccgaacctggagatcaagaaaacaagccttgccggatcaaaggtgac
ataggacagtctactgatgatgattctgttcctcttgtccattgtgtccgcctcctgtgt
gcgtcatttttgctgactggggaaaaaaatgttttggttccagacagggacgtgcgggtc
agtgtgaaggcactggcactcagctgtgttggagctgctgtggcccttcatcctgaatct
ttcttcagcaaactttataaagtacctcttgacaccatggaataccctgaggagcagtat
gtgtcagacatcctgaactacatcgaccacggagacccccaagtcagaggagccacggcc
gttctctgcggaaccctcatctcctctatcctcagcagatcccgcttccaggtgggagat
tggatgggcaccgtcaggaccctgacaggaagtacattttctctggcggactgtgttcct
ttgctgcagaaaactttgaaggatgaatcttctgttacttgcaagttggcttgtacagct
gtgaggcactgtgtcatgagtctctgcagcagtagctatagtgaattgggattacagctg
atcaccaacgtgctgaccctgagggatagttcctactggttggtgaggacggagctcttg
gaaactctggcagagattgactttcggttggtgagctttttggagacaaaagcagaaaac
ctgcacagagggactcatcattacacagggcttttaaaactacaagaacgagtgctccat
gatgttgtcatctatctgcttggggatgaggaccccagagtgcggcatgttgcagcagcg
gcattaatgaggcttgtcccaaagctgttttataagtgcgaccaaggacaagctgacccc
gtggtggctgtggcgcgagatcaaagcagtgtttacctgaagctcctcatgcacgaggca
cagcctccatctcacttctccgtcagcaccataaccagaatctacagaggctataactta
ctaccgagcatgacagacgtcactgtggaaaacaacctctccagagtcattgcagcagtt
tcccgcgaattggtcacgtcaaccacacgtgcgctcacatttggatgctgcgaagctctg
tgtctcctttcaagtgcctttcctgtctgcatttggagtttaggttggcattgtggggtg
cctccactaagcacctcagatgagtctagaaagagctgtactgttggcatggccacgatg
atcctcaccttgctctcgtctgcttggttcccactggatctctctgcccatcaggatgct
ttggttttagccggaaacttacttgcagccagtgcccccaaatctctgagaagttcatgg
acctctgaagaggaggccaacccagcagcctccaagcaggaagaggtctggccagctttg
ggtgaccggaccctggtgcccatggtggagcagctcttctcccacttgctgaaggtgatt
aacatctgtgctcacgtcttggacgatgtggctcctggaccagcaataaaggcagccttg
ccgtctctgacaaaccctccttccctaagtcccatccgacggaagggaaaggagaaagaa
cctggagagccagcctctgtgcccttgagccccaagaaaggcagcgaagccagtccagcc
tctcgacaatctgatgccccaggacctgttacagcaaataagtcctcgtcgttggggagt
ttctgtcaccttccttcatatctcaaattgcacgatgtcctgaaagctactcacgccaac
tataaggttaccttggatcttcagaacagcactgaaaagtttgggggctttctgcgctct
gccttggatgttctctctcagatcctggagctggccacgctgcaggacatcgggaagtgt
gtggaggagatcctagggtatctgaagtcctgtttcagtcgagaaccagtgatggcaact
gtttgtgttcaacagttgttgaagactctctttgggactaacttggcctcccagtttgat
ggcttatcttccaaccccagcaagtctcaaggtcgagcacagcgtctgggctcgtccagc
gtgaggccaggcttgtatcattactgtttcatggctccatacacccacttcacccaggcc
ttagccgatgccagcttgaggaccatggtgcagacggagcaggaccacggcacctcaggg
tggtttgatgtgcttcagaaggtgtctacgcagttgaagaccaacctcacgagtgccact
aagaaccgtgcagataagaatgctattcataatcacatacgtttgttcgagcctctggtt
ataaaagctttaaaacagtatacgaccacaacgtctgtgcagctgcagaggcaggtttta
gacttgctggcacagctggttcagttacgggtcaattactgtcttctggactcagatcag
gtgtttattggatttgtgctgaagcagtttgagtacattgaagtaggccagttcagggaa
tcagaggcaattattccaaacatctttttcttcctggtattactatcttatgaacgctat
cattcaaaacagatcattggaattcctaaaatcattcaactctgtgatggcatcatggcc
agtgggaggaaggctgtgacacatgccataccggccctgcagcccatagtccatgatctc
tttgtactgagaggaaccaataaagccgatgcaggaaaagagcttgaaacccaaaaagag
gtggtggtgtcaatgttactgagactcatccagtaccatcaggtgctggagatgttcatc
ctggtcctacagcagtgccacaaggaaaatgaagataagtggaagcgactgtctcggcag
atagcggatgtcatcctcccgatgttagccaagcagcagatgcacattgattctcatgaa
gcccttggagtgttaaatactttatttgagatcctggctccttcttccctccgtcctgtg
gatatgcttttacgaagtatgtttgtcactccagatacaatggcatctgtgagcactgtc
caactgtggatatccggaatcctagccattttgagagttctaatttcccagtcaactgaa
gatattgttctttctcgtattcaggagctctccttctccccatatttaatttcctgtcca
ataattaataggttaagagatggggatagtacttcaataccagaagaacaccatgaaggg
aaacaaatgaagactttgccagaggaaacattttcaaggtttctactacaactagttggc
attcttttggaggatattgttacaaaacagctaaaagtagaaatgagtgaacagcaacat
actttctattgtcaagaactaggcaccctgctcatgtgtctgatccacatcttcaagtct
ggaatgttccggagaatcacagcagctgcctctagactcttcaccgtagacagcaccgat
ggcagtttctatggcctagagaggctgaacgcccgggtgcgtgccatggtgcccacacat
ccagccctcgtgctgctctggtgccagatcctgctgctcgtcagccacaccgactaccgc
tggtgggcagaggtgcagcagacccccaggagacgcagtctgtccagtaccaagtcactc
agcccccagatgtctggagaagaggaggatcccgatgcagcatgcaagcttgggatgtgc
aatagagaaatagtgcgaaggggagctctcattctcttctgcgattatgtctgtcagaac
ctacacgattcagagcacctaacgtggctcatcgtgaatcatatccaggacctgatcaat
ctgtcccatgagcctcccgtgcaggattttattagtgctgttcatcggaactctgctgcc
agtggccttttcatccaggcaattcagtctcgttgtgaaaatctttccacccctaccact
ctgaagaagacgcttcagtgcttggaagggatccacttcagccagtcgggtgccgtgtta
accctatatgtggacaagcttttgtgcactccgttccgtgtgctggctcgcatggtcgac
actctagcctgtcgccgggtggaaatgcttctggctgcaaatttacagagtggcatggcc
cagctgccagtggaggaagtgagcagagtccaggagtacctgcagcgcagcgggctggcc
cagagacaccaaaggctctactccctgctggacaggctgcgtcttgccactgcaccgggc
tcacgtggcccttcacctccagttacctcccacccgctggacggggatgggcccctggca
ctagagatagtgattccagataaagactggtacctacgtctagtcaaatcccagtgctgg
actaggtcagattctgcgctgctggaaggggcagaactggtgaatcggattcctcccagt
gacatgagtacattcatgatgaactcggaattcaacttaagtctgttggctccatgcctg
ggcctgggcatgcgcgaaatctccggaggccagaggagtcccctttttgaagctgctcgc
ctagtgacactggaccgcgtgaccagcctggtccagcagctccctgctgtccatcatgtg
ttccagccattcctgcctatggagcccaccgcctactggagcaagttgaacgatctattt
ggggatgccgtgttgtatcggtccttgaccactctggcccgggccctagcccaatacctg
ctggtgttctccaaactgcccagccatttgcagctacctcctgagaaggagagggacact
gtgaagtttgtggtcatgacccttgaggccctggcatggcatttgatccacgagcagatc
ccactgagtctggaccttcaggcaggcctcgactgctgttgcctggctctgcaactgccc
agcctctggagtgtgctctcctccccagagatggtgacccacgcctgctctctcattcac
tgtgtccgcttcatcctagaagccgtcgtggtgcagcctggggaccagctgcttagccca
gaaaggagggtgaacatgccaaaggccgccagagtggacgaagtagatccaaacacacaa
aatctagcatatatcaccacagcctgtcagatggtggcagaaatggtggagtctttgcca
tcagtgttggccttggggcacaagaggaacagcaacaccccagcgtttctcacgtcagtg
ctgaggaacatcgtcatcagcctggctcgcttacccctcgtcaatagctacacgcgtgtc
cccccgctggtttggaaactcggatggtcgcctgagccaggaggggactttggcacagcc
ttccctgagatcccagtggagttcctccaggaaaaggaagtctttaaagagttcatctac
cgcatcaatgcactaggatggaccagccgcacccagtttgaggaaacgtgggccaccctc
cttggtgtcctggtgactcagcctcttgtgatggagcaggaagagagcccactggaagaa
gacacagagaggacccagatcaacgtcctggctgtgcaggccatcacttccctggtgctg
agtgcaatgactgtgcctgtggctggcaacccagctgtgagctgcttggagcagcagccc
cggaacaagcccctgaaagtccttgacaccaggtttgggaggaagttgagcattatccga
ggaattgtagagcaggaaatccaagcaatggtttcaaagagagagaatatcgccacacat
cacttataccaagcgtgggaccctgtcccttctctgtctccagctactacaggtgccctc
atcagccacgacaagcttctgctgcagatcaaccccgagcgggagctgggaaacatgagc
tataagcttggccaggtgtccattcactccgtgtggctggggaacagcatcacacccttg
agagaggaggagtgggaggaggaggaagaagaggaagctgatgtccctgcacctgcatca
ccacccacatcacccgtcaactccaggaagcaccgggctggagtcgacattcactcctgt
tcccagtttttgcttgaattgtacagtcgctggatcctgccgtcaggttcggccagaagg
acacccatcatcctgatcagtgaagtggttcgatccctcctcgtggtctcagacttattc
actgagcgcacccagtttgagatgatgtatctgacgctgacggaactgcggagggtgcac
cctgcagaagacgagattctcattcagtacctggtgcccgccacctgcaaggcagctgcc
gtccttggaatggacaaggccgtggcagagcctgtcagccggctgctggagaccacgctg
aggagcagccaccttcccagcaaggtcggagccctgcacggcgctctctacgtgctggag
tgtgacctcctggatgagacggcgaagcagctcgtcccagtcatcagtgactacctcttg
tccaacctcaaagcggcggcccactgtgtgaacattcatagccagcagcacgtgctggtg
atgtgcgccactgccttttacctgatcgagaactaccccctggatgtaggcctggaattc
tctgcatcaataatacagatgtgtggggtgatgctgtctggaagtgaggagtccacccca
tctatcatctaccactgtgtcctgcggggtctggagcgcctcctgctctctgaacaactc
tgccggctagatgcagagtccctggtcaagcttagtgtggacagagtgaacgtgcacagc
ccacatcgggccatggctgccctgggcctgatgcttacctgcatgtacacagggaaggag
aaaatcagcccgggcagaacctcagaccccagccccaccgccccagacagcgagtcagtg
attgtggctatggagcgtgtgtctgtactttttgacagggtcaggaaagggttcccctgt
gaagccagagtggtggcacggatccttcctcagtttttagatgacttcttcccaccccag
gacgtcatgaacaaagtcattggagaatttctgtccaaccagcagccgtaccctcagttc
atggccaccgttgtatataaggttttccagactctgcacagcaccgggcagtcgtccatg
gtccgagactgggtcatgctgtccctgtccaacttcacacaaaggacgccagtggccatg
gccgtgtggagcctctcctgcttctttgtcagtgcttccaccagcccgtgggtctcggcg
gtccttccccacgttatcagcaggatgggcaagctggaacaagtggacgttaacctcttc
tgcctggtggccacggacttttacagacaccagatagaggaggagctggaccgccgggcc
ttccagtctgtgttcgaggtggtcgcggcaccaggaaacccgtatcatcgattgctgact
tgtttgcggaatgtccacaaagtcaccacgtgctga
DBGET
integrated database retrieval system
