Nyctereutes procyonoides (raccoon dog): 129510797
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Entry
129510797 CDS
T09008
Symbol
SDC1
Name
(RefSeq) syndecan-1 isoform X1
KO
K06257
syndecan 1
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04512
ECM-receptor interaction
npo04514
Cell adhesion molecule (CAM) interaction
npo04820
Cytoskeleton in muscle cells
npo05144
Malaria
npo05205
Proteoglycans in cancer
npo05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129510797 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
129510797 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129510797 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
129510797 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
129510797 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
129510797 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
npo04131
]
129510797 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
npo04090
]
129510797 (SDC1)
00535 Proteoglycans [BR:
npo00535
]
129510797 (SDC1)
Membrane trafficking [BR:
npo04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
129510797 (SDC1)
CD molecules [BR:
npo04090
]
Proteins
129510797 (SDC1)
Proteoglycans [BR:
npo00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
129510797 (SDC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Romo1
DUF8063
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
129510797
NCBI-ProteinID:
XP_055183017
LinkDB
All DBs
Position
Unknown
AA seq
310 aa
AA seq
DB search
MRRAALWLWLCALALRLQPALPQIVATNVPPEDQDGSGDDSDNFSGSGAGALQDITLSQQ
TPSTWKDLALLTATPTAQEPTGADDIDSSTSILLTREGPKGGEAVLVAEAEPGFTDREKE
TAHPSSETTPHPTTHRASTARATTAQGPATFHPHRDAQPDHHQISVLAEPSQLDPHTPRV
EDGGPSATERAAEDGVSTQLPAGEGSGEQDFTFDVSGENTAGTAVDPDQRNQPPVDRGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPSKQEEFYA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctgtggctctggctgtgcgcgctggcgctgcgcctgcagccggct
ctcccgcaaattgtggccacaaatgtgccccccgaagaccaagatggctctggggatgac
tctgacaacttttctggctccggtgcaggtgctctgcaggacatcaccttgtcacagcag
accccgtccacctggaaggacttggcacttctgacggccacgcccacagctcaggagccc
accggcgcggatgacatcgacagctccacgtccatcctgctgaccagagagggccccaag
gggggagaggccgtgctcgtggcagaggcggagcccggcttcaccgaccgggagaaggag
actgcccacccctccagcgagaccacgccgcaccccaccactcacagggcttcgaccgcc
agagccaccacggcccagggccctgccaccttccatccccacagggacgcgcagcctgac
caccatcagatctcggttcttgcagaacccagccagctcgaccctcacaccccgagagtg
gaggacggaggtccctctgccaccgagagggccgccgaggacggagtctccactcagctc
ccagcgggagagggctccggggagcaggacttcacctttgacgtatctggggaaaacacg
gccgggacagctgtggaccctgaccagcggaatcaacccccagtggaccgtggggccacg
ggggcctcacagggcctcctggacaggaaggaagtgctgggaggggtcatcgctggaggc
ctcgtggggctcatcttcgccgtgtgcctggtgggcttcatgctgtaccggatgaagaag
aaggacgagggcagctactccttggaggagcccaaacaagccaacggcggagcctaccag
aagcccagcaagcaggaggagttctatgcctga
DBGET
integrated database retrieval system