KEGG   Nyctereutes procyonoides (raccoon dog): 129510797
Entry
129510797         CDS       T09008                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1 isoform X1
  KO
K06257  syndecan 1
Organism
npo  Nyctereutes procyonoides (raccoon dog)
Pathway
npo04512  ECM-receptor interaction
npo04514  Cell adhesion molecule (CAM) interaction
npo04820  Cytoskeleton in muscle cells
npo05144  Malaria
npo05205  Proteoglycans in cancer
npo05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:npo00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    129510797 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    129510797 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    129510797 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    129510797 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    129510797 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    129510797 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:npo04131]
    129510797 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:npo04090]
    129510797 (SDC1)
   00535 Proteoglycans [BR:npo00535]
    129510797 (SDC1)
Membrane trafficking [BR:npo04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    129510797 (SDC1)
CD molecules [BR:npo04090]
 Proteins
  129510797 (SDC1)
Proteoglycans [BR:npo00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   129510797 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1 DUF8063 Glycophorin_A
Other DBs
NCBI-GeneID: 129510797
NCBI-ProteinID: XP_055183017
LinkDB
Position
Unknown
AA seq 310 aa
MRRAALWLWLCALALRLQPALPQIVATNVPPEDQDGSGDDSDNFSGSGAGALQDITLSQQ
TPSTWKDLALLTATPTAQEPTGADDIDSSTSILLTREGPKGGEAVLVAEAEPGFTDREKE
TAHPSSETTPHPTTHRASTARATTAQGPATFHPHRDAQPDHHQISVLAEPSQLDPHTPRV
EDGGPSATERAAEDGVSTQLPAGEGSGEQDFTFDVSGENTAGTAVDPDQRNQPPVDRGAT
GASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQ
KPSKQEEFYA
NT seq 933 nt   +upstreamnt  +downstreamnt
atgaggcgcgcggcgctgtggctctggctgtgcgcgctggcgctgcgcctgcagccggct
ctcccgcaaattgtggccacaaatgtgccccccgaagaccaagatggctctggggatgac
tctgacaacttttctggctccggtgcaggtgctctgcaggacatcaccttgtcacagcag
accccgtccacctggaaggacttggcacttctgacggccacgcccacagctcaggagccc
accggcgcggatgacatcgacagctccacgtccatcctgctgaccagagagggccccaag
gggggagaggccgtgctcgtggcagaggcggagcccggcttcaccgaccgggagaaggag
actgcccacccctccagcgagaccacgccgcaccccaccactcacagggcttcgaccgcc
agagccaccacggcccagggccctgccaccttccatccccacagggacgcgcagcctgac
caccatcagatctcggttcttgcagaacccagccagctcgaccctcacaccccgagagtg
gaggacggaggtccctctgccaccgagagggccgccgaggacggagtctccactcagctc
ccagcgggagagggctccggggagcaggacttcacctttgacgtatctggggaaaacacg
gccgggacagctgtggaccctgaccagcggaatcaacccccagtggaccgtggggccacg
ggggcctcacagggcctcctggacaggaaggaagtgctgggaggggtcatcgctggaggc
ctcgtggggctcatcttcgccgtgtgcctggtgggcttcatgctgtaccggatgaagaag
aaggacgagggcagctactccttggaggagcccaaacaagccaacggcggagcctaccag
aagcccagcaagcaggaggagttctatgcctga

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