Nyctereutes procyonoides (raccoon dog): 129511038
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Entry
129511038 CDS
T09008
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npo03041
]
129511038 (DDX1)
03016 Transfer RNA biogenesis [BR:
npo03016
]
129511038 (DDX1)
Enzymes [BR:
npo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
129511038 (DDX1)
Spliceosome [BR:
npo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129511038 (DDX1)
Transfer RNA biogenesis [BR:
npo03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
129511038 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Paramyxo_PNT
Motif
Other DBs
NCBI-GeneID:
129511038
NCBI-ProteinID:
XP_055183460
LinkDB
All DBs
Position
Unknown
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATKGLTKGKHYYEVSCHDQGLCRVGWSSMQASLDLGTDKFGFGFGGTGKKSHNKQFD
NYGEEFTMHDTIGCYLDIDKGHIKFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKF
NFGEEEFKFPPKDGFVALAKASDSYVVKSQHTGNAQVAQTKFLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLDNGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLSQGYSDFINRIHNQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKADRLWERLGKNHIRTDDVHAKDNTRPGAN
SPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFMQQGGGPDKKGHQF
SCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCYNTRLKEDGGCTIWYNEMQLLS
EIEEHLNCTISQVEPDIKVPVDEFDGKVTYGQKRAIGGGNYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttctgagatgggtgttatgcctgagattgctcaagccgtagaagagatg
gattggcttctcccaactgatatccaggctgaatctatcccattgatcctaggaggcggt
gatgtacttatggctgcagaaacgggaagtggaaaaactggtgctttcagtattccagtt
atccagatagtttatgaaactctgaaagaccaacaggaaggcaaaaaaggaaaaacaacc
attaaaactggtgcttcagtgctcaacaaatggcaaatgaacccgtatgatagaggatct
gcttttgcaattgggtctgatggtctttgttgtcaaagcagagaagtgaaagagtggcat
ggatgcagagctacaaaaggattaacgaaagggaagcactactatgaagtatcctgtcat
gaccaaggtttatgcagagttgggtggtcttccatgcaggcttccttagacctaggtact
gacaagtttggatttggctttggtggaacagggaagaaatcccataataaacaatttgat
aattatggagaggaattcactatgcatgataccattggatgttaccttgatatagataaa
gggcatatcaaattctccaaaaatggaaaagaccttggtctggcatttgaaataccacca
catatgaagaaccaagccctttttcctgcttgtgttttgaagaatgctgaactaaaattt
aacttcggtgaagaagaatttaagtttccaccaaaagatggttttgttgctcttgccaag
gcatcggatagttatgttgtcaaatcgcagcacacaggtaacgcgcaggtggcacaaacc
aagtttcttcccaatgctccaaaagctctcatcgtcgagccctctcgagagttagctgaa
caaactttgaataacgtcaagcagtttaagaaatatattgataatcctaaattaagggag
cttctgataattggaggtgttgcagcgcgggatcagctctctgttttggataatggggta
gatatagtcgttggcactccaggaagactagacgatttagtgtcaactggaaagctgaat
ttatcccaagttagattcctggtcctggatgaagctgatgggcttctttctcaaggttac
tctgattttataaataggattcacaatcagattcctcagattacgtctgatgggaaaaga
cttcaggtgattgtttgctctgctacattacattcttttgatgtgaagaagctgtctgag
aagataatgcattttcccacatgggttgatttaaaaggagaagactctgtcccggacact
gtacaccatgttgttgtccctgtgaatcccaaagctgacagactttgggaaaggcttggg
aaaaaccacattagaactgatgatgtacatgcaaaagataacacaaggcctggtgctaat
agtccggagatgtggtctgaagctattaaaatcctgaagggggagtatgctgtccgggca
atcaaggaacacaagatggatcaagcaattattttctgtagaaccaaaattgactgtgat
aacttggagcaatattttatgcaacaaggaggaggacctgataaaaaaggacatcagttc
tcatgtgtttgtcttcatggggacagaaagcctcacgagaggaagcaaaacttggaaaga
tttaagaaaggagatgtgaggttcttgatttgcaccgatgtagctgccagaggaattgat
atccatggtgttccttatgttataaatgtcaccttgcctgacgaaaagcaaaactacgta
catcgaattggcagagtaggaagagctgaaaggatgggtctggccatatccctggtggca
acagagaaagaaaaggtgtggtaccatgtatgtagcagccgtggaaaaggatgttataac
acaagactcaaggaagatggtggttgtaccatatggtacaatgagatgcagttgctgtct
gagatcgaagagcatctgaattgcaccatttctcaggttgaaccagatataaaggtacca
gtggatgaatttgatgggaaagttacctatggtcagaaaagggccattggcggtggaaac
tataaaggccatgtggatattttggcacctacggttcaagagttggctgcccttgaaaag
gaggcgcagacatctttcctgcatcttggctaccttcctaaccagctgttcagaaccttc
tga
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