Nyctereutes procyonoides (raccoon dog): 129511373
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Entry
129511373 CDS
T09008
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo01524
Platinum drug resistance
npo03430
Mismatch repair
npo05200
Pathways in cancer
npo05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
129511373 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129511373 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
129511373 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
129511373 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npo03400
]
129511373 (MSH6)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
129511373 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Imm30
WPP
Motif
Other DBs
NCBI-GeneID:
129511373
NCBI-ProteinID:
XP_055183946
LinkDB
All DBs
Position
Unknown
AA seq
1361 aa
AA seq
DB search
MSRQSTLYSFFPKSPTLSNANKASARASGEGGGAAAAGASPSPGGDAAWSEAEPGPGPLA
GRASPPEARNINGGLRRAAAPAAPASSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSVRIHVQFFDDSPTRGWVSRRLLKPYTGSKSKEVQKGGHFYSSKPEILRAMQRAD
EALNKDKIERLELAVCDEPSEPEEEEEMEVGATHSSEKSEEDNEIESEEEVRPKVQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDAKEEGSSDEISSGVGDSDSEGLDSPVKVASKR
KKMVTGNGSLKRKSSRKEMPLAAKRSTGISSETKSALNAYSAPQNSESQAHIGGGCDDSS
RPTIWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLIIFYKVGKFYELYHMDALTGVNELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRVITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEDSSGHTRVYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSTETKMILKGSLSSSLQEGLIPGSQFWDAAKTLRTLLEEEYFKEKLNEDSGVMLPQVLK
GMTSESDSLGLTPGEKSELALSALGGCVFYLKKCLIDQELLSMANFEEYIPLDSDMVSAT
RPGAVFAKANQRMVLDAVTLSNLEIFMNGTDGSTEGTLLEKIDTCHTPFGKRLLKQWLCA
PLCSPSAINDRLDAIEDLMVVPDKISDVADLLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVICKIIEIMEEVVDNFKSKILKQVITLQTKNPEG
RFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRS
RIGCRTIVYWGIGRNRYQLEIPENFITRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSQGSDGPMCRPVIL
LPEEGTPPFLDLRGSRHPCITKTFFGDDFIPNDILIGCEEEEEENGKAYCVLVTGPNMGG
KSTLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETAS
ILRHATAHSLVLVDELGRGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQN
VAVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRK
AREFEKMTQSLRLFREVCLASERSTVDAEAVPKLLTLIKEL
NT seq
4086 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcacgctctacagcttcttccccaagtctccaacgctgagtaatgcc
aacaaggcctcggccagggcctcaggtgaaggcggcggcgccgctgccgccggggcctcc
ccttctcccggcggggatgcggcctggagcgaggccgaacctgggcctgggccgctggct
ggccgcgcgtcgccgccggaggcgaggaacatcaacggagggctgcggagggctgccgcg
cctgcggcccccgccagttcttgtgacttctcaccaggtgatttggtttgggccaagatg
gagggttatccctggtggccttgcctggtttacaaccacccttttgatggaacattcatc
cgtgagaaagggaagtctgtccgaattcatgtacagttttttgatgacagcccaacaagg
ggctgggttagcagaaggctattaaagccatacacagggtcaaaatcaaaggaagtacaa
aagggaggtcatttttacagttcaaagcctgaaatactcagagcaatgcaacgtgcagat
gaagccttgaataaagacaagattgagaggcttgaattggctgtgtgtgatgagccctca
gaaccagaggaagaagaagagatggaggtaggtgcaactcattcatcagaaaagagtgaa
gaagacaatgaaattgaaagtgaagaagaagtaaggcctaaggtccaaggatctaggcga
agtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacattggtggc
tctgatgtggaatttaagccagatgctaaggaggaaggaagcagtgatgaaataagcagt
ggagtaggggatagtgacagtgaaggcctagacagcccggtcaaagttgcttcaaagcgg
aagaaaatggtgactggaaatggctctctcaaaaggaaaagttctaggaaggagatgccc
ctggccgccaaacgatcaactggcatttcatcggaaaccaagagtgctttgaatgcttac
tctgcccctcaaaattctgaatctcaagcccacattggtgggggatgtgatgatagtagt
cgccccactatctggtatcatgaaactttagaatggcttaaggaggaaaagagaagagat
ctacataggaggcgacctgatcaccctgattttgatgcatccacactctatgtgcctgag
gatttccttaattcctgtactcctgggatgaggaagtggtggcagatcaagtctcagaac
tttgatctgattatattttataaggtggggaagttttatgagctgtaccacatggatgct
cttactggagtcaatgaactagggctggtattcatgaaaggcaactgggctcattctggt
ttccctgaaattgcatttggccgatactctgattctctggttcagaagggctataaagta
gcacgagtggaacagactgagaccccagaaatgatggaggcacgatgccggaagatggca
catatatctaagtatgacagagtggtgaggagggagatctgtagagtcattaccaagggt
acacagacctacagtgtattggaaggtgacccctctgagaactacagtaagtatcttctt
agcctcaaagaaaaagaggaggattcttctggccacactcgggtgtatggagtatgtttt
gttgatacctcactgggaaagtttttcataggtcagttttcagacgatcgccattgttcc
aggtttaggactctagtggcacactatcctccagtacaagtcttgtttgagaaaggaaat
ctctcaacagaaactaagatgattctgaagggttcattatcctcctctcttcaggaaggt
ctcataccaggctcccagttttgggatgcagccaaaactttgagaactctccttgaagaa
gaatattttaaggaaaagttaaatgaggacagtggggtgatgttaccccaggtgcttaaa
ggtatgacctcagagtctgattctcttgggctgacaccaggagagaagagtgaattggcc
ctctctgctctaggtggttgtgtcttctacctcaaaaaatgccttattgatcaagagctc
ttatcaatggctaattttgaagaatacattcccttggattctgacatggtcagtgctaca
agacctggtgctgtttttgctaaagccaatcaacgaatggtgctagatgctgtgacatta
agcaacttggagattttcatgaatggaacagatggttctactgaagggaccctgctagag
aagattgatacttgccatactccctttggtaagcggcttctaaagcagtggctttgtgcc
ccactctgtagcccttctgctatcaatgatcgtctagatgctatagaagacctcatggtt
gtgcctgacaaaatctctgatgtggcggaccttttaaagaagcttccagacctcgagagg
ctgctgagtaaaattcataatgttgggtctcccttgaagagccagaaccacccagatagc
agagctataatgtatgaagagactacatacagcaaaaaaaagattattgattttctttct
gctctagaaggattcaaagtaatatgtaaaattatagagatcatggaagaagtcgtggac
aactttaagtctaaaatccttaagcaggttattactctgcagacaaaaaatcctgagggc
cgttttcctgatttgactgtagaattaaaccgatgggatacagcctttgatcatgaaaag
gctcgaaagactggactaattactcccaaagcaggatttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacttggagaaacagcgcagt
cgaattggctgcaggaccattgtctactgggggattggtaggaaccgttatcagttggaa
attccagagaatttcatcactcgtaatttgccagaagaatatgagttgaaatctaccaag
aagggctgtaaacgatactggaccaaaactattgaaaagaagttggctaatctgataaat
gctgaagaacggagagacgtatccttgaaggactgtatgaggcgactattttataacttt
gataaaaattacaaggactggcagtctgctgttgagtgcatcgcagtattagatgtctta
ctatgcctggctaactacagtcaagggagtgatggccctatgtgtcgtccagtaattttg
ttgccagaagaaggaactcctcccttcttagaccttagaggatcacgtcatccctgcatt
acgaagactttttttggagatgattttatacccaatgacattctaataggctgtgaggaa
gaggaggaggaaaatggcaaagcttattgtgtgcttgttactggacctaacatggggggc
aagtctacactcatgagacaggctggcctattagctgtaatggcccagatgggttgttat
gtacctgctgaagtgtgtaggctcacaccaattgatagagtatttactagacttggtgcc
tcagacagaataatgtcaggcgaaagtacattttttgttgaattgagtgaaactgccagc
atacttaggcatgcaaccgcacattctctggtgcttgtggatgaattagggagaggtact
gcaacattcgatggaacagcaatagcaaatgcagttgttaaagaacttgctgagaacata
aagtgtcgtacattgttttctacccactaccattcgttagtagaagattattctcaaaat
gttgcagtgcgcctgggccacatggcatgcatggtagaaaatgaatgtgaggatcctagc
caggagactattaccttcctctataaattcattaagggagcttgtcctaaaagctatggc
tttaatgcagcaaggcttgctaatcttccagaggaggttattcaaaagggacatagaaaa
gcaagagaatttgagaagatgactcaatcactacgattatttcgggaagtttgcctggct
agtgaaaggtcgactgtagatgctgaagctgtccctaagttgctgactttgattaaggaa
ttatag
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integrated database retrieval system
