Nyctereutes procyonoides (raccoon dog): 129511636
Help
Entry
129511636 CDS
T09008
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03082
ATP-dependent chromatin remodeling
npo04714
Thermogenesis
npo05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129511636 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129511636 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
129511636 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npo03021
]
129511636 (SMARCC2)
03036 Chromosome and associated proteins [BR:
npo03036
]
129511636 (SMARCC2)
Transcription machinery [BR:
npo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129511636 (SMARCC2)
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129511636 (SMARCC2)
PBAF complex
129511636 (SMARCC2)
GBAF(ncBAF) complex
129511636 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
129511636
NCBI-ProteinID:
XP_055184475
LinkDB
All DBs
Position
Unknown
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSMGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
ADMQNFGLRTDMYTRKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGGGATEEETKEKTSEVPKKDEERGKQGDSEKE
SEKSDGDPIVDPDKEKEPKEGQEEVLKDMVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPVLPPGSQPVPPTGTAGPPTVHSLAMA
PASVAPAPAGSGAPPGSLGPSEQIGQAGSAAGPQQQQPAGAPQPGAVPPGVPPPGPHGPS
PFPNQQTPPAMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPAPSIIPFGSLADSISINL
PPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgaggctctggctcggcaagaactacaagaagtatatacaa
gctgaaccacctaccaacaagtccttgtctagcctggttgtacagttgctacagtttcag
gaagaagtttttggcaaacatgtcagcaatgcgccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtgcagaataactgcctgtctcgacct
aacatttttctctgcccggaaattgaacccaaactgctagggaaattaaaggacattatc
aagagacaccagggaacagtcactgaggataagaacaatgcctcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaagcgggataagcag
gttcttctgcactggggctactaccctgacagttatgacacgtggatcccagccagtgaa
attgaagcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggattctggacacagacactttcaatgaatggatgaatgaggaagactatgaagtaaat
gatgataaaagccctgtctcccgccgaaagaagatttcagccaagactctgacggatgag
gtgaacagcccagattcagatcgacgggacaagaaggggggcaactataaaaagaggaag
cgctccccctctccttcaccaaccccagaagctaagaagaaaaatgccaagaaaggtccc
tcaacaccttacaccaagtcaaagcgtgggcacagagaggaggagcaagaagacctgaca
aaggatatggatgagccttcaccagtccccaatgtagaggaggtgacgttacctaagaca
gtcaacactaagaaggattcagagtccgccccagtcaaaggaggcaccatgactgacctg
gatgaacaggaggatgaaagcatggagaccacgggcaaggatgaggatgaaaacagtatg
gggaataagggggagcagacgaagaacccggacctgcacgaggacaacgtgactgagcag
acccaccacattatcattcccagctacgctgcctggtttgactataatagtgttcatgcc
attgagcggagggctctccccgagttctttaacggcaagaacaagtccaagaccccggaa
atctacctggcttatcgaaacttcatgattgacacttaccggctgaacccccaagaatat
ctcacctctactgcctgccgtaggaacctggccggtgatgtctgtgccatcatgagggtc
catgccttcctagagcagtggggtctcattaactaccaggtggatgctgagagtcgaccg
accccgatggggcctccgcccacctctcacttccatgtcttggcagacacaccatcgggg
ctggtgcctctgcagcccaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgacaaaggcaaagagaagcca
gcagacatgcagaacttcgggctgcgcacagacatgtacacaaggaagaacgtcccctcc
aagagcaaagctgcagccagtgccactcgagagtggacggaacaagagaccctgctactc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtcagagcacgtgggaagc
cgcacgcaggatgagtgcatcttgcattttcttcgtcttcccattgaagacccgtacctg
gaggactcggaggcctccctgggccccctggcctaccagcctatccccttcagtcagtca
ggcaaccctgttatgagcactgttgccttcctggcttctgtcgtcgatcctcgagtcgcc
tctgctgctgcgaagtcggccctagaagagttctccaagatgaaggaagaagtacccaca
gccttggtggaggcccatgttcggaaagtggaagaagccgccaaagtgacaggcaaggcc
gacccagccttcggtctggagagcagtgggatcgcagggaccacctccgatgagcccgag
cggatcgaggagagcgggactgatgaggcacgggcggagggccaggccacagaggagaag
aaggagcccaaggaaccccgagaaggaggtggggctactgaagaagaaacaaaggagaag
accagcgaggtccccaagaaggatgaagagagagggaaacaaggcgacagtgagaaggag
tcagagaagagtgatggggaccccatagttgaccccgacaaggagaaggaaccaaaggaa
gggcaggaggaagtgctgaaggacatggtggagtcagagggggagaggaagacgaaggtg
gagcgggacatcggcgagggcaacctctccactgccgcagccgctgccctggccgccgcc
gcagtgaaggccaagcacctggccgccgtggaggagaggaagatcaaatcactggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaactccggcactttgaagagttg
gagacgatcatggaccgggagcgagaggcactggagtatcagaggcagcagctcctggca
gatagacaagccttccacatggagcagctgaagtatgcggagatgagggcccggcagcag
cacttccagcaaatgcaccaacagcagcagcagccaccgccagttctgcccccgggctcc
cagcctgtcccacccaccggcactgctgggccgcccacggttcacagcctggccatggct
ccggcctctgtggcccccgctcctgctggcagtggggccccccccggaagcttgggcccc
tctgaacagattgggcaggcagggtcagctgcggggccacagcagcagcaaccagctgga
gccccccagcctggggcagtcccaccaggggttcccccccctggaccccatggcccctca
ccgttccccaaccaacaaactcctcccgcaatgatgccaggggcagtgccaggcagcggg
cacccaggcgtggcgggtaatgctcctttgggtttgccttttggcatgccacctcctcct
cctcctgctccatccatcatcccatttggtagtctagccgactccatcagtattaacctg
ccccctcctcctaacctgcatgggcatcaccaccatctcccgtttgccccgggcactctc
cccccacctaacctgcctgtgtccatggcgaaccctctacatcctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
ccaggtacccctctgcctccagaccccacggccccaagcccaggcacagtcacccctgtg
ccacctccacagtga
DBGET
integrated database retrieval system
