KEGG   Nyctereutes procyonoides (raccoon dog): 129512657
Entry
129512657         CDS       T09008                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X1
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
npo  Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:npo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npo03400]
    129512657 (MDC1)
DNA repair and recombination proteins [BR:npo03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    129512657 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 129512657
NCBI-ProteinID: XP_055186103
LinkDB
Position
Unknown
AA seq 1929 aa
MGRSWTRKLGAKGQATDQGMQVMEDTQAINWEVEEEEETERPSEALGRGLEPVGRLHIFS
SAHGPEKDFPLYLGKNMVGRMPDCSVTLPFSSISKQHAVIEILAWDKAPVLQDCGSLNGT
QVLRPPKVLSPGVSHRLRDQELILFADLPCQYHRLNVPLPFVSRGPLTVEETPRVQGGTQ
PQGLLLAEDSEEEVDSPSERCVMKEPRTSPLAAVVPESDEEGPSPAPDGPGPPFAFNLNS
DTDEEESQHSAAGEASLSARRGSTAETEQLKAMTPATQLGKDQCSVKERNNNTKIERDAR
NGVVSLGGILERNQSAGEDSDTDVDESRPPVRPAEVHLERAQPSDFIDSDTDVEEERIPA
TPAVVPMKKRQIFHRVSTKSLQEPALVHLQENPAGSDTDVEESEIQQAVPLERNQISMVI
DSNTDDEEEVLAALTLARLKESGSDTWNRGTDVEEDRAQPLALLERSQTSAGRDSKTDME
EEGLPMENRRTVPKCHTDKACSEKRQFPLQDSDLEVDEDKSLLEVHLERNQASATIDITQ
VEEKVLPGPAIILVEKHQVPVVWTNQTYVEVEGGQAKLPVMHLGEPQPPLSEDCGTDVEE
DTSLAASLVADTGKHQLLAEGDAGTESAAPVLEQERVLEARAQGVSLVSQVEQDLPVSKE
NLIDLVVDTGTSGETIQPQREGAQTPTERKREPHVDRTKNSGDNHGDSEDLDLQATQCFV
ERQNQSPEAVQSMEDEATQAFLATLPQESGPSYYSFQASGALDEPWEVLATQPFCPRESE
ASEPQPIAAHIDAHGSCPSTPRTAPQAQHPESPVHAEPLGIQGRGMQTAEKDMGTPREAP
EEVAPERGPLDRETKKLPAGEREDVLGEELTRGIWVLARDNQGQESDQKVKSASTERNME
SLNIEIEIPREAQEKETEKQFIAREIFEREAEKPILEREGEPSGLGMKVPEVKLERGPQR
GEIEKGSQDQEGQASSLTPEPSAGMGAQQGLASVPGASGSQSGGAPMSPSRQERGHLTCK
APPAEKASVGDQESTDAHLPAAVPEASTPHHNPLLSQSQKHPVSQPFLSSSPSSLEPIPR
TRQNGNQEVPGTPLSSEMEPLYPKSKVRLRGSSRKTLSAISSLALEPHSTIPTDQPLCPE
PTSRVTRGRTCRSSLKTPELLVPEVQPSTSKNQSVTAEPISQGRTRKSVKTPEPVVSTAT
QSRALRSSVKTPKVDISTTPALQPSTSKDQPVTPEPTSQVTWGRTRRSSVKIPEPTVPTA
PALQPSTSEDQSVITEHTSGGTHSRTRRSSVKTPEPIVPTAPEVQPTIPKDQPVTPEPTS
QITWGRTRRSSVKTPEPTVPTAPELQPSTSKDQSVITEPTHRRTHRSSLKTPKPTVPTAT
ELQPTTHKGQPVTPKRTSQRRTPKSSSKTPTSVVSTVPELQACTPTDQPVTPKLAFQATR
GRTQRFSIKTPEPVAPTVPEPQPSISTDQPVTPEPTSRATRGRTHRSFVKMPQPIEPTAP
DLESLTPTDQLFSPKVQGSQGKMLRSSTISAVPVLTTPEFQPSVPTDQPIPPEPISQANC
SRRLRATRNHKSLIAPIICEPYSVLPEPKSRSSRNQRQRAARAVESLRTIPKPAFAQLPE
APTHATQIHKLEAAGRSEFTLGPPPKASQSHKRPLATVDSPPPQKRHQRGEVTQETVFLK
EEEEDPMERPREEEDVVVPGPGKRKRDQAEEEPKGIPSRSLRRTKPNQESTAPKVLFTGV
VDARGERAVLALGGSLASSVAEASHLVTDRVRRTVKFLCALGRGIPILSLDWLHQSHKAG
CFLPPDEYVVTDPEQEKNFGFSLRDALSRAREQRLLEGYEIHVTPGVQPPPPQMGEIISC
CGGTVLPSMPRSYKPQRVVITCSQDFPRCSIPFRIGLPILSPEFLLTGVLKQEAKPEAFI
FSTLEMSSS
NT seq 5790 nt   +upstreamnt  +downstreamnt
atgggtaggagttggaccagaaaactaggagctaagggccaagcaactgaccaaggcatg
caggtcatggaggacacccaggctatcaactgggaggttgaagaagaggaggagacagag
agacccagtgaagccttggggcgtggcttagagcctgtagggcggttgcatatcttcagt
agtgcccatggaccagaaaaagattttcccctgtatcttgggaagaatatggtaggccga
atgcctgattgctctgtgaccctgcccttttcatccatctccaaacaacatgcagtcatt
gaaatcttggcctgggacaaggcacctgtcctccaagattgtggcagcctcaatggtact
caagtcctaaggcctcctaaggtcctaagcccaggggtgagtcatcggctgagggaccag
gagttgattctctttgctgacttgccctgccagtaccatcgcctgaatgtccccctgccc
tttgtttcccggggccctctaactgtagaagagacacccagggtacagggaggaactcaa
ccccaggggctcctgttggctgaggactcagaggaggaagtagattctccttctgaaagg
tgtgtgatgaaagaaccaaggacctcccctttggcagcagtagttccagagagtgatgaa
gaggggccttctcctgccccagatggccctgggccaccttttgccttcaacctgaacagt
gacacagatgaggaagaaagtcagcattcagcagcgggagaggcctccttatctgccaga
agaggctccactgcagaaacagaacagctgaaagctatgacacctgcaacccagcttgga
aaggatcagtgttcagtgaaggagaggaacaataacacaaaaattgagagggatgcaagg
aatggggtggtctcacttggggggattctggagagaaaccaaagtgctggggaggacagt
gacacagatgtggatgagagcaggcctccagtaaggcctgctgaagtccatttggaaagg
gcccaaccttctgatttcatagacagtgatactgatgtggaagaagaacggatccctgca
acaccagctgtagttcctatgaagaagaggcaaatcttccacagagttagtacaaagagt
cttcaggaacctgctttggttcatctacaggagaacccagctggtagtgatacagatgtg
gaggaaagtgagatccaacaggcagtccctctggagagaaaccaaatttccatggtgatt
gacagcaatacagacgatgaggaagaagtcttagcagcactcactttggcacgtctgaaa
gagagcggatctgatacatggaacagaggtacagatgtggaagaggacagggcccaacct
ttggcccttctggagcgaagccaaacctctgctgggagagatagtaagacagacatggag
gaggagggtctcccaatggaaaacagaagaactgtgcccaagtgtcatacagacaaggca
tgctcagaaaagaggcaatttcctctccaagacagtgatctagaggtagatgaagataag
agcttacttgaggtccacctggagagaaatcaagcctctgccaccatagacatcacacaa
gtggaagagaaagtcctaccaggaccagctattatacttgtggagaagcatcaggtgcct
gtggtatggacaaatcaaacatatgtggaagtagaagggggccaagcaaagctgcctgtg
atgcacctaggggaaccccagcctcctctatctgaggactgtgggacagatgtggaggag
gacacatccttagcagcctcactggtggcagatactggaaagcaccagcttctagcagaa
ggggatgctgggacagaatcggctgcaccagttcttgagcaggagagagttcttgaggcg
agggcccagggggtttcacttgtatcacaggtggagcaagatctccctgtctcaaaggag
aaccttatagatctggtggtggacacaggcacttcaggagaaaccatccaaccacagaga
gagggagcccagacccccacagaaaggaagagggaaccacatgtggacaggaccaagaac
tctggagacaaccatggtgattctgaagacctggacctccaggctacccagtgctttgtg
gagagacagaatcagagcccagaagcagtccagagcatggaggatgaagccactcaggcc
ttcctggctactctaccccaagagtctggcccttcctattacagcttccaggcctcaggt
gccctggatgagccgtgggaagtcttggcaacacagccattctgtccaagagagtctgag
gcctctgagccccagcccattgctgcccacattgatgcccatggatcttgcccctctaca
cctaggacagcaccacaagcccaacatccagagagcccagttcatgcagagccactgggg
attcaaggcagagggatgcagactgcggagaaagacatgggtacaccaagagaagcacca
gaggaggtggcccctgagagaggcccattggacagggaaaccaagaagctgccagcagga
gagagagaagatgtgttaggagaagagttaactagagggatatgggtgttagctagagat
aatcagggacaagagtctgaccaaaaggtgaaaagtgcaagtactgaaaggaacatggag
agtttaaacatagaaattgagatacccagggaagcacaagagaaagagacagaaaagcag
tttattgcaagagaaatatttgagagagaagcagagaaaccaatactagagagagagggt
gagccaagtggattaggcatgaaggtaccagaagtaaaactggagagaggcccacagaga
ggggagatagagaaagggagccaagaccaggaagggcaggcctccagtctaacaccagag
cctagtgcagggatgggggcccagcagggacttgcttcagtcccaggagcttctgggagc
cagtcaggtggagccccgatgagccccagcaggcaggagagaggccacctgacttgcaag
gcgccacctgctgagaaggcctctgtgggtgatcaggaatccacagatgctcatctgcct
gctgcagtgcctgaagcttcaaccccacaccacaaccccctcctctctcagagtcaaaaa
catcctgtgtctcagcccttcctttcttcctctccatcttctttagagcccattcccagg
accaggcaaaatgggaatcaggaagttccagggactcctttatcctcagagatggagcct
ctgtacccaaaatccaaagtcaggctccgagggtcctccaggaagacactctctgcaatt
tcttctttagcccttgaacctcactcaaccatccccacagaccagcccctctgtcctgag
cccacatctcgggtcactcggggcaggacatgtaggtcctctctcaagacccctgaactc
cttgtccctgaagtccagccttccacctccaaaaaccagtctgtcactgctgagcccata
tctcaaggcaggacacgtaaatctgtcaagactcctgaaccagttgtctccacagccact
cagagcagggcacttaggtcttctgtcaagactcccaaagtagacatctccacaacccct
gcgctccagccttctacttccaaagaccagcctgtcacccctgagcccacatctcaggtc
acttggggcaggacacgtaggtcctctgtcaagatccctgaaccaactgtccccacagct
cctgcactccagccttccacctctgaagaccagtctgtcatcactgagcacacatctggg
ggcactcacagcaggacacgtaggtcttctgtcaagactcctgagccaattgtcccaaca
gctcctgaagtccagcctactatccccaaagaccagcctgtcacccctgagcccacatct
cagatcacttggggcaggacacgtaggtcctctgtcaagacccctgaaccaactgtcccc
acagctcctgaacttcagccttctacctccaaagaccagtctgtcatcactgagcccact
cacaggaggacacacaggtcttctctcaagactcctaagccaactgtccccacagccact
gagctccagcctaccacccacaaaggccagcctgtcacccccaaacgtacatctcagcgc
aggacacctaagtcttctagcaagactcccacatcagttgtctccacagtccctgagctc
caggcttgcacccccacagaccagcctgtcacccccaaacttgcatttcaggccactcgg
ggtaggacacaaaggttctctatcaagacccctgaaccagttgcccccacagtgcctgaa
ccccagccttctatctccacagatcagcctgtcactcctgagcccacatctcgggccact
cggggcaggacacataggtcctttgtcaagatgccccagccaattgaacccacagcccct
gatcttgaatctctcacccccacagatcaactgttctcccccaaggttcagggaagtcag
ggtaagatgctaaggtcttctacaataagtgctgtgccagttcttaccactcctgaattc
cagccttctgtccccacagaccagcctattccccctgagcccatctctcaagccaattgc
agcaggaggctgagggccactaggaaccataagtcccttatagctcccattatctgtgag
ccctactctgtactccctgaacctaaatctcggtcctcaaggaaccaaagacaaagagca
gcgagagcagttgagtccctcaggaccattcccaagccggcctttgcccagcttcctgaa
gcccccactcatgctacccagatccacaagttggaggcagcaggcagatctgagttcacc
ctggggcccccacctaaggcctctcagagccacaagaggcctttggctactgtggattca
cccccacctcaaaaacggcaccaaagaggagaagtcacccaggagacagtgttcctcaag
gaggaggaagaagatccaatggagaggccaagggaggaagaggatgtagtggttccagga
ccaggcaagagaaagagagaccaagcagaggaggagcccaagggaatcccaagccgcagt
cttagacgaaccaaacctaaccaagagtccacagcccccaaagttctcttcacaggagtg
gtggatgcccgtggtgagcgggcagtgctggccctgggggggagtctggccagctcagtg
gcagaggcttcccacttggtgactgatcgagtccgccgtacggtcaagttcctgtgtgcc
ctggggcgggggattcccatcctctccttggattggctccaccagtcccacaaggctggt
tgctttttgcccccggatgaatatgtggtgactgatcctgagcaggagaagaactttggc
ttcagccttcgagatgctctgagccgggctcgggagcaaaggttgctggagggctatgag
atccatgtgactccaggagtccagccaccaccacctcagatgggagagatcatcagctgc
tgtggaggcactgtactacccagcatgccccggtcttataagcctcagagagttgtgatt
acatgctcccaggacttccctcgatgctctattccgtttcggattgggctgcccatcctc
tcacctgagttcctgctaacaggagtgctaaagcaggaagccaagccagaggcgttcatc
ttctccactttggaaatgtcatcctcctga

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