Nyctereutes procyonoides (raccoon dog): 129512758
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Entry
129512758 CDS
T09008
Symbol
CASC3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3
KO
K14323
protein CASC3
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03013
Nucleocytoplasmic transport
npo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
129512758 (CASC3)
03015 mRNA surveillance pathway
129512758 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129512758 (CASC3)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
129512758 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
129512758
NCBI-ProteinID:
XP_055186292
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRSGETVKHESSYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEAASEIPAAXPDTAPPAPDRPVEKKSYSRARRTRIKAGDAVKV
AEEVPPPPEGLNPAPPVPETTPPPPAKTGNWEASVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRSMPNHIHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgca
ggaggcggtggcagcggctccctgccttcccagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggggccaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgccgttctgtcggattatgaaagtgcagaagactctgaaggt
gaagaaggggagtatagtgaagaggaaaactccaaagtagagctgaaatcagaagccaat
gatgctgctaactcttcagccaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagagacagagtggggatgggcaggagagcacagaacctgtggagaac
aaagtgggtaaaaaaggccctaagcatttggatgatgatgaagatcgaaagaacccagca
tacataccccggaaaggactcttctttgagcatgatcttcgagggcaaactcaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgaaggtcgctgggaacat
gacaagtttcgagaagatgaacaagctccaaagtcccgacaggagctcattgctctttat
ggctatgacatacgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccacaaagagatccaaactggattgttgagcggccaaacaag
tcccatcgccaccagggtcctgggggtaccctaccaccaaggacatttatcaacaggaac
gctgcaggtactggccgaatgtctgctcccaggaattactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggaagctggtgggcagcacggtggccgatctggt
gagactgttaaacatgaaagcagttaccgatcacggcgcctagagcagactcctgtgagg
gacccatctccagaagctgatgctcaagtgctcggcagtcccgagaaggaagaggcggcc
tcagagataccagctgctngccctgatactgcaccaccagcccctgacaggcctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaaggtt
gcagaggaggtgccccctccacctgaagggctgaacccagcacctccagtcccagaaacg
acccctcctccacctgctaagactggaaactgggaggcttcagtggattctactacaagt
ggacttgagcaagatgtggcacaactaaacataacagaacagaactggagtccagggcag
ccttcattcctgcaaccacgtgagcttcgaagtatgcccaaccatatacacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcagcggcaaagacctgtaccagagccccctgctcctcctgtgcacatc
agtatcatggaaggccattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgccccactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccggcacctctgcccaatccaggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgctcctact
tacttttctgctccaggcgtcatgaactttggtaatcccagctacccttatgctccaggg
gcactgcctcccccaccgcctcctcatctgtatcctaatacacaggccccatcacaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccacctgaggttgtaagcagg
ggttccagttaa
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