Nyctereutes procyonoides (raccoon dog): 129513283
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Entry
129513283 CDS
T09008
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npo04515
]
129513283 (PCDHB1)
Cell adhesion molecules [BR:
npo04515
]
Cadherins
Protocadherins
129513283 (PCDHB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
129513283
NCBI-ProteinID:
XP_055186969
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MAVARRKFLQSRQVGSLLFLLCISTGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGSKVHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRAE
VRVFDINDNAPIFLNKQPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSPNAYFHL
HTRFRSQGPKYAELVLDKPLDREEQPEVNLTITAVDGGSPPKSGIAHIRVEVLDVNDHVP
QFSRLVYRVQVPENSANGSLVATVSATDLDEGSNKEITYSLAQNPETILQTFQIDSQTGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVALFSIRDRDIQVGGKIICFLREDLPFAVKPTFRNSYSLVTDRGLDREEVSGYNV
TVVAMDTGPPSLFTETVIEVLISDINDNPPVFQEDSYILTVRENNSPAIFIGKVHAEDLD
LGENAQVTYTLLPPKSGDLAVFAYISINSDNGKLYALRTIDYEAIQDFQFVVKATDGGFL
SLSSQVTVRVVILDDNDNRPMILYPLQNGTSPCNDLVPRSADVGYLVTKVVAVDGDSGRN
SWLSYHLLKATDPGLFSVQQQNGEIRTLRQISERDPMIQKLIVLVQDHGQPVLSTTASLN
ILLVDGFSEPYLQFRNPSKNPTRVNPSTKYLVISLAVLSFLFLLSVTVIFVLHIYQKVKY
REKFTVQEHFYDDCNFPNNLVQGGASGSLSQPCPYEMCSATGTSNSEFRFLKRFMPNFPF
PHGTGEAKTEACSSLPPDSERNRSQGSEDHGRVSDNCM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcgcgcagaaaattcttgcagagcaggcaagtagggtctcttctctttttg
ttgtgcatatctacggggagcgcggccactatccgctattcggtggcggaagagatggag
agtggttcgtttgtggctaatgtggccaaggacctggggctggaggtagggaagctggct
gcgcggggggcgcgactggtttccgagggcagcaaagtgcatttccggctccaccgcaag
acaggggatctgttcgtgaaggagaaactggatagggagtcgctttgtggcaaagctgac
ccgtgtgtgctgcactttgaaatagtcctggtggagccgctgcagtcctttcgtgctgag
gtcagggtatttgatatcaatgacaatgccccgattttcctgaacaagcagccgctttta
aagattccggagagcacacccttgggttcacgttttcctctgcagagcgcccaggatctg
gacgtgggcctcaatggtcttcagaactacaccttgagccccaacgcgtatttccacctg
cacacccgttttcgcagccaagggcccaaatatgccgagctggtcctggataagcctctg
gacagagaggagcagcctgaagtcaacctgaccattacggcggtggacggcgggtcccca
cccaaatctggcatcgcccacatccgcgtggaggttctggacgtcaatgaccacgtacct
cagttctctagactggtgtaccgcgttcaggtgccggaaaatagcgccaatggttctttg
gtggccactgtgagtgccacagacctggacgaaggctccaacaaggaaataacgtactcc
ttagctcaaaacccagaaacaattctccagacatttcagattgactctcaaactggagag
gttcgactaagagggcccctagattttgaagcaattgaaacatacgatattgacattcaa
gccacagacggagggggcctctctgcccacagcaaagtcctggtggaagtggtggatgtg
aatgacaatcctcctgaggtgacagtctcctctgtatccagccctctccccgaagactcc
ccactacaaactgtagtagcccttttctctattcgagaccgggacattcaggtgggagga
aaaatcatctgcttcctcagagaagaccttccttttgcagtcaaacctactttccggaat
tcttactcactggttactgacagaggcttggatcgggaagaggtttccggctacaatgtc
actgttgttgccatggatactgggccacccagtctgttcacagaaactgtgattgaggtg
ctaatatctgacatcaatgacaaccccccagtatttcaggaagactcctacattttgact
gttcgagaaaacaacagcccagcaatttttattggcaaagttcatgctgaagatctagat
ttgggtgagaatgcccaagtaacatatactttgctgcctccaaaaagtggagatttagcc
gtgtttgcttatatctccataaattcagataacgggaagctctatgcactgagaaccatt
gattatgaggccattcaagattttcagtttgtggtaaaggcaactgatgggggcttcttg
tcattgagtagccaggttactgtcagagtggttattctggatgacaatgacaaccgccca
atgatcttgtacccactgcagaatggcacctcaccctgcaatgacttggtgcccaggtct
gcagatgtgggctacctggtaaccaaggtagtggctgtggatggtgactcaggtcggaat
tcttggctctcatatcatctccttaaggccactgaccctgggttattctctgttcaacag
caaaatggggaaatccgtacattgcggcagatatctgagagagaccctatgattcagaaa
ctgatcgttcttgttcaagatcatggccaaccagttctttccactactgcctcactcaac
atcttgctggtagatggattttctgaaccttatctgcaattccggaatccatccaagaat
cctacaagggtaaatccatccactaaatatttggtcatttctctagctgtgctttccttt
ctctttctcctgtctgtcacagtgatctttgttcttcacatctaccagaaggttaaatat
agagaaaagttcacagttcaagagcatttctatgatgactgtaatttccctaacaacctg
gtacaaggaggggccagtgggtctttatctcagccgtgtccctatgaaatgtgctcagcc
actggcaccagcaatagtgagtttcggtttcttaagcgctttatgcccaactttcccttc
ccccatggcactggagaggcaaaaacagaggcttgctccagtttaccaccagattctgag
aggaataggtctcaggggtcagaggatcatggtcgagtatccgacaactgtatgtag
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