Nyctereutes procyonoides (raccoon dog): 129513556
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Entry
129513556 CDS
T09008
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-11-like
KO
K16493
protocadherin alpha
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129513556
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
npo03036
]
129513556
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npo04515
]
129513556
Chromosome and associated proteins [BR:
npo03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
129513556
Cell adhesion molecules [BR:
npo04515
]
Cadherins
Protocadherins
129513556
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_C_2
DUF6805
Motif
Other DBs
NCBI-GeneID:
129513556
NCBI-ProteinID:
XP_055187656
LinkDB
All DBs
Position
Unknown
AA seq
821 aa
AA seq
DB search
MFGFQRRGLGTRRLLLSVLLLAVWEPASGQVRYSVPEEAKHGTFVGRIAQDLGLELAELV
PRLFRLASKGHGDLLEVNLQNGILFVNSRIDREELCGRTLECSIHLEVIVDRPLQVFHVE
VEVKDINDNPPLFSLREQKLLIPESKQPDSYFPLEGASDADIGENALLTYRLSHNEYFSL
ELPTQNKQTKRLSLKLKKYLDREKTPEFNLLLTAADGGKPELTDTIQLFVHVLDINDNDP
EFEQSEYKVKLTENAAKETFVIKLNATDPDEGVNGEVTYSLISIKPNGKLLFTLDENNGE
VRVNGTLDYEENKFYEIEVQATDKGNPSMAGHCTVWIEILDANDNAPEVTITSLSLPVPE
DAQPSTVVALISVSDRDSGANGQVTCSLAPQGPFKLVSTFKNYYSLVLDSALDRESVANY
ALVVTARDGGSPSLSATASVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARD
ADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAG
VPPLGSNVTLQVFVLDENDNAPALLPLPGARGGGGALSEPVSRAVGAGHVVAKVRAVDAD
SGYNAWLSYELQPAAGGARSPFRVALYTGEISTTRALDEADAPRQRLLVLVKDHGEPALT
ATATVLLSLVESGQAPRPSSRVLAGGAGAGAGAALVDVNVYLIVAICAVSSLLVLTLLLS
TALRCSAPPSEGACGPGKPTLVCSSAVGSWSYSQQRRQRVCSGEGPPKADLMAFSPSLPR
GLHGEVGGERQEAGSNHPGQVGSLPXVLWVHLERKMLSLLK
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctttcaaagaaggggattgggcactcggcgtctgctgctctcggttctgctc
ctcgcagtctgggagcccgcgagcggccaggtccgctactcggtcccggaggaggccaaa
cacggcaccttcgtgggtcgcatcgcccaggacctggggctggagctggcggagctggtg
ccgcgccttttccgactggcgtccaaaggccacggggaccttctggaggtaaatctgcag
aatggcattttgtttgtgaattctcggatcgaccgggaggagctgtgtgggaggactctg
gagtgcagcatccacctggaggtgatcgtggacaggccgctgcaggttttccatgtggag
gtggaggtgaaggacattaacgacaatccgccgctgttctctctcagagaacaaaaactg
ctgattcctgaatctaagcaacccgactcttattttcctctagagggagcttctgatgcg
gatataggagaaaatgctctattgacctacagactaagtcacaatgagtatttttcttta
gaattaccaacacaaaataagcagactaaaagactgtcgcttaaattaaagaagtatctg
gatcgagagaaaactccagaatttaatttgctactgaccgctgcagatgggggaaaaccg
gagctcactgacaccattcagcttttcgtccacgtcttggatattaacgacaatgatccg
gaatttgagcaatcagaatacaaggtgaaactgacggaaaacgcagctaaagaaactttt
gtaataaagctaaacgccacagatccagatgaaggagtcaatggtgaggtaacctactcc
ttgatatcaattaagcccaatggaaaactcttatttacactagatgaaaataacggagaa
gtgagggtcaatggaactttagattatgaagaaaacaagttttatgaaattgaagtacag
gccacagataaagggaatccctcaatggcaggtcattgtacagtctggatagaaatctta
gacgcgaatgataacgcccctgaagtcaccataacttccctgtctctcccagtaccagag
gacgctcagcccagcacggtcgtcgccctaatcagcgtatccgaccgtgactctggcgcc
aacgggcaggtgacctgctcactagcaccccaaggccccttcaagctggtgtccaccttc
aagaattactattcgctggtgctggacagcgccctggacagagagagcgtggcgaactac
gctctggtagtgaccgcacgcgacggaggctcgccttcgctgtcggccacggccagcgtg
tccgtggaggtggccgacgtgaacgacaacgcgccggcattcgcgcagcccgagtacacg
gtgttcgtgaaggagaacaacccgcccggctgccacatcttcacggtgtcggcgcgcgac
gccgacgcgcaggagaacgcgctggtgtcctactcgctggtggagcggcgcgtgggcgag
cgcgcgctgtcgagctacgtgtcggtgcacgcggagagcggcaaggtgtacgcgctgcag
ccgctggaccacgaggagctggagctgctgcagttccaagtgagcgcgcgcgacgcgggc
gtgcctcccctgggcagcaacgtgacgctgcaggtgttcgtgctggacgagaacgacaac
gcgcccgcgctgctgccgctgcccggggcgcgcggcgggggcggcgcgctgagcgagccg
gtgtcgcgggcggtgggcgcgggccacgtggtggccaaggtgcgcgcggtggacgcggac
tcgggctacaacgcgtggctgtcgtacgagctgcagccggcggcggggggcgcgcgcagc
ccgttccgcgtggcgctgtacacgggcgagatcagcacgacgcgcgccctggacgaggcg
gacgcgccgcgccagcgcctgctggtgctggtgaaggaccacggcgagccggcgctgacg
gccacggccactgtgctgctgtcgctggtggagagcggccaggcgcccaggccttcgtcg
cgggtgttggcgggcggcgcgggcgcgggcgcgggcgcggcgctggtggacgtcaacgtg
tacctgatcgtcgccatctgcgcggtgtccagcctgttggtgctcacgctgctgctgtcc
acggcgctgcggtgctcggcgccgcccagcgagggcgcgtgcgggccggggaagcccacg
ctggtgtgctccagcgcggtggggagctggtcgtactcgcagcagaggcggcagagggtg
tgctctggggagggcccgcccaaggccgacctcatggccttcagccccagcctgcctcgg
ggcctgcatggagaagtcggaggggaaaggcaggaggcaggatcaaatcaccctgggcag
gttggcagtcttccttaagttttgtgggttcatctagaaaggaaaatgttaagtctatta
aagtga
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