KEGG   Nyctereutes procyonoides (raccoon dog): 129513721
Entry
129513721         CDS       T09008                                 
Symbol
RBBP4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
npo  Nyctereutes procyonoides (raccoon dog)
Pathway
npo03082  ATP-dependent chromatin remodeling
npo03083  Polycomb repressive complex
npo04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:npo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    129513721 (RBBP4)
   03083 Polycomb repressive complex
    129513721 (RBBP4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    129513721 (RBBP4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:npo03036]
    129513721 (RBBP4)
Chromosome and associated proteins [BR:npo03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     129513721 (RBBP4)
  Histone modification proteins
   HAT complexes
    HATB complex
     129513721 (RBBP4)
   HDAC complexes
    Sin3A-HDAC complex
     129513721 (RBBP4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     129513721 (RBBP4)
    PRC2.2
     129513721 (RBBP4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     129513721 (RBBP4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    129513721 (RBBP4)
  Chromatin remodeling factors
   NuRD complex
    129513721 (RBBP4)
   NuRF complex
    129513721 (RBBP4)
   NuRF complex (fruit fly)
    129513721 (RBBP4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 ANAPC4_WD40 Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_RIG_1st eIF2A MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 129513721
NCBI-ProteinID: XP_055187972
LinkDB
Position
Unknown
AA seq 425 aa
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSIHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEG
YGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGSVDP
EGQGS
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggccgacaaggaagcagcctttgatgacgcagtagaggaacgtgtgatcaacgaagag
tacaaaatatggaaaaagaacaccccttttctttacgatttggtgatgacccatgctctg
gagtggcctagcctaactgcacagtggcttccagatgtaaccagaccagaagggaaagac
ttcagcattcatcgacttgtcctgggaacacacacgtcggatgaacaaaaccatcttgtg
atagccagtgtgcagctccctaacgatgatgctcagtttgatgcttcacactacgacagt
gagaaaggagaatttggaggttttggctcagttagtggaaaaattgaaatagaaatcaaa
atcaaccatgaaggagaagtgaaccgggcacgttatatgccccagaacccttgcatcatt
gcaacaaagactccatccagtgatgttcttgtttttgactatacaaaacatccttccaaa
ccagacccttctggagagtgcaacccagacttgcgtctccgtggacatcagaaggaaggc
tatggactttcttggaacccaaatctcagtgggcacttacttagtgcttcagatgaccac
accatctgcctctgggacatcagtgctgttccaaaggaaggaaaagttgtggatgcgaag
accatctttacagggcatacagcagtagtagaagatgtttcctggcatctgcttcatgag
tctctgtttgggtcagttgctgatgatcagaaacttatgatctgggatacgcgttcaaac
aatacttccaaaccaagccactcagttgatgctcacactgctgaagtgaactgcctatct
ttcaatccttatagtgagttcattcttgccacaggatcagccgacaagactgttgccttg
tgggatctaagaaatctgaaacttaagttgcattcctttgagtcacataaggatgagata
ttccaggttcagtggtctcctcacaatgagactattttggcttccagtggtactgatcgc
agactgaatgtctgggatttaagtaaaatcggagaggaacaatccccagaagatgcagaa
gatgggccaccagaattgttgtttattcacggtggtcacactgccaagatatctgatttc
tcctggaatcccaatgaaccttgggtgatttgttctgtatcagaagataatatcatgcaa
gtgtggcaaatggcagagaacatttataatgatgaagaccctgaaggaagcgtggatcca
gaaggacaagggtcctag

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