Nyctereutes procyonoides (raccoon dog): 129513768
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Entry
129513768 CDS
T09008
Symbol
PCDH1
Name
(RefSeq) protocadherin-1 isoform X1
KO
K16498
protocadherin delta 1
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129513768 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npo01009
]
129513768 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npo04515
]
129513768 (PCDH1)
Protein phosphatases and associated proteins [BR:
npo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129513768 (PCDH1)
Cell adhesion molecules [BR:
npo04515
]
Cadherins
Protocadherins
129513768 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129513768
NCBI-ProteinID:
XP_055188049
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MDSGAGGPRCPEAALLILGTARMGPLKPSPGPSGQRLLLALLLLLAASPGHATRVVYKVP
EEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLRECQN
QLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPENTNIGS
LFPIPVASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEGKQPQLIVMGNLDRERWDS
YDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKAN
DSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAKDRGTN
PKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVSDRDEG
ENAAVTCVVANDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPP
LSSTNSLKVQVVDVNDNAPVFTQSITEVAFPENNKPGEVVAEVTASDADSGSNAELVYSL
EPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDC
NDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVIQNGTG
TILSSLSFDREHQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSNTSHQL
LTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHH
GLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAGDPEYE
RSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSSKA
SKGNKSKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPPGSPDL
GRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTN
PPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALP
EDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTQECSEFGHSDTCWMPGQSSPSRRT
KSSALKLSTFVPYQDRGGQEPVGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDS
ATLEEIPLTQTSDFPPAATPASAQTAKREIYL
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggggccggcggcccgcgctgccccgaggcggccctcctgattctaggtact
gccaggatggggcccctgaagcccagcccaggccccagcgggcaacggttgctgctggca
ctgctgcttctgctggctgcatcccccggtcatgccactcgggtggtgtacaaagtaccg
gaagaacagccacccaacaccctcattgggagcctcgcagctgactatggctttccagat
gtgggccacttgtacaaactagaggtaggcgccccatacctgcgagtggatggcaagacg
ggagacatcttcaccactgagacctctatcgaccgcgaggggctgcgtgaatgccagaac
cagctccctggtgagccttgcatcctggagtttgaggtgtctattacggacctcgtgcag
aatggcagtccccggctgttagagggccagatagaggtacaggacatcaatgacaacaca
cccaactttgcctcaccagtcatcacgctacccatcccggagaacaccaacattggctca
ctcttccccatcccggtggcctctgaccgtgatgctggccccaacggtgtggcatcctat
gagctgcaggccgggcccgaggcccaggagctatttgggcttcaggtggcagaggaccag
gaggggaagcagccacagctcatcgtgatgggcaacctggaccgggagcgctgggattcc
tatgacctcaccatcaaggtgcaggatggtggcagccccccacgtgccagcagtgccctg
ctgcgagtcactgtgcttgacaccaatgacaacgcccccaagtttgaacggccctcctac
gaggctgaactgtctgagaacagccccataggccactcggtcatccaggtgaaggccaac
gactcagaccaaggtgccaacgcggagattgactacacgttccaccaggcacccgaggtg
gtgaggcgtctcctgcgactggacagaaacactggacttatcactgtgcagggccccgtg
gatcgtgaggacctaagtaccctgcgcttctcggtgctcgccaaggaccgaggcaccaac
cccaagagtgcccgtgcccaagtggtagtgactgtgaaggacatgaatgacaatgccccc
accattgagatccggggcatagggctggtgacccatcaagacgggatggccaatatctca
gaggatgtggcagaggagacagcagtggccttggtgcaggtatctgaccgagatgaggga
gagaatgcagctgtcacctgtgtggtggcaaatgatgtacccttccagctacgccaggcc
agtgagacaggaagtgacagcaaaaagaaatacttccttcagaccaccactccgctcgac
tacgagaaggtcaaagactataccatagagattgtagctgtggattctggcaacccccca
ctctcgagcaccaactccctcaaggtccaggtggtggacgtcaatgacaatgcccctgtc
ttcacacagagcatcacagaggtcgccttcccagaaaacaacaagccgggtgaagtggtc
gctgaagtcactgccagcgatgccgactcaggctctaatgccgagctggtttactctctg
gagcctgagccggctgccaaggggctcttcaccatctcacctgacactggagagatccgg
gtgaagacatcccttgaccgggaacagcgggacagttatgagttaaaagtggtggcagct
gaccgaggcagtcccagcctgcagggcacagccaccgtccttgtcaatgttctggattgc
aatgacaatgaccccaagtttatgctgagtggctacaacttctcggtgatggagaacatg
ccagcgctgagtccagtgggcatggtgactgtcattgatggggacaaaggggagaatgcc
cgggtacagctgacggtggagcaggacaatggtgactttgttatccaaaacggtacgggc
accatcctctccagcctgagctttgatcgagagcatcaaagcacctataccttccagctg
aaggcagtggatggtggtgtcccacctcgctcagcttatgttggtgtcaccatcaatgtg
ctggatgagaatgacaatgcgccctttatcactgccccttccaacacctctcaccagctg
ttgaccccccagacccgtcttggtgagacggtcagccaggtgacagctgaagacattgac
tctggtgtcaatgcggagttgacctacagcattgctggtggcaacccttacggactcttc
cagattgggtcacactcaggtgccatcacccttgagaaggagattgagcggcgccaccat
gggctacaccgcctcgtggtaaaggtcagtgaccgtggcaagcccccacgctatggcaca
gccttggtccacctttatgtcaatgagaccctggccaaccgcacgcttctggagaccctg
ctgggccacagcctggacacgccactggacatcgacattgctggggatccagaatatgag
cgctccaagcaacgtggcaacatcctctttggtgtggtggctggtgtcgtggctgtggcc
ttgctcattgccctggcagtgcttgtacgctactgccggcagcgggaggccaagagtggc
taccaggccggtaagaaggagaccaaggacctgtatgcccccaagcccagcagcaaagcc
tccaagggcaacaaaagcaagggcaagaagagcaagtccccgaagcccgtgaagccagtg
gaagatgaggacgaggccgggctgcagaaatccctcaagttcaatctgatgagcgacgcc
cccggagatagcccccgcatccacctgcccctcaactacccaccgggcagccctgatctg
ggccgccactaccgctctaactccccactgccttccatccagctgcagccccagtcaccc
tcggcctccaagaagcaccaagtggtgcaggacctgccacccgcaaacacatttgtgggc
actggtgacaccacgtccacgggctctgagcagtactccgactacagctaccgcaccaac
ccccccaaataccccagcaagcagttacctcaccgccgcgtcaccttctccgccaccagt
caggcccaagagctgcaggacccatcccagcacagttactatgacagtggcctggaggag
tccgagacgccatccagcaagtcatcctcgggaccccgactcggtcccctggctctgcct
gaggatcattatgaacgcaccactcctgatggcagcataggagagatggagcaccccgag
aacgacctgcgccctttgcctgacgttgccatgacaggcacatgtacccaggagtgcagc
gagtttggccactccgacacgtgctggatgcctggccagtcatctcccagccgccggacc
aagagcagcgccctcaaactctccaccttcgtgccttaccaggaccgaggagggcaggag
cctgtgggcgccggcagccccagccccccggaagaccggaacaccaaaacggcccccgtg
cgcctcctgccctcctacagtgccttctcccacagtagccatgattcctgcaaggactcg
gccaccttggaggaaatccccctgacccagacctcggacttcccacctgcagccacaccg
gcatctgcccagacagccaagcgcgagatctacctgtga
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