Nyctereutes procyonoides (raccoon dog): 129513789
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Entry
129513789 CDS
T09008
Symbol
ERCC8
Name
(RefSeq) DNA excision repair protein ERCC-8 isoform X1
KO
K10570
DNA excision repair protein ERCC-8
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03420
Nucleotide excision repair
npo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129513789 (ERCC8)
09124 Replication and repair
03420 Nucleotide excision repair
129513789 (ERCC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npo04121
]
129513789 (ERCC8)
03400 DNA repair and recombination proteins [BR:
npo03400
]
129513789 (ERCC8)
Ubiquitin system [BR:
npo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129513789 (ERCC8)
DNA repair and recombination proteins [BR:
npo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
129513789 (ERCC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD_LRWD1
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_Nup120_160
Beta-prop_WDR11_1st
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
129513789
NCBI-ProteinID:
XP_055188087
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MLGFLSARQAGLDHPLRLRRAESTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEARYML
SGGSDGVIVLYDLENSSRQPYYTCKAVCSIGRNHPDVHKYSVETVQWYPHDTGMFTSSSF
DKTLKVWDTNTLQTADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSH
ILQVIFAGHRQEILAVSWSPRCEYVLATASADSRVKLWDVRRASGCLITLDQHNGKKSQA
VESANTAHNGKVNGLCFTNDGLHLLTVGTDNRMRLWNSSSGENTLVNYGKVCNDSRKGLK
FTVSYGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQELYSGSRDC
NILAWVPSLYEPVPDDDEPTTKSQLNPAFEDAWSSSDEEG
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttaggatttttgtcagcgagacaagccggcttggaccaccctcttcgcctccggagg
gcggagtccacgcggagggttttgggactagagttaaacaaagacagagatgttgaaagg
atccatggcagtggagttaacaccctggacattgaacctgttgaagcaagatacatgtta
tcaggtggttcagatggtgtgattgtactttatgatcttgagaactccagcagacaacct
tattacacatgtaaagcagtgtgttccattggcagaaaccatcctgatgttcacaaatat
agtgtggagactgtacagtggtatcctcatgacactggcatgttcacatcaagctcattt
gataaaactctgaaagtgtgggatacaaatacattacaaactgcagatgtatttaatttt
gaagaaaccgtttatagtcatcatatgtctccagttgccaccaagcactgtttggtagca
gtcggtactagagggcccaaagtacagctttgtgacttaaagtctggatcctgctcccac
attttacaggttatatttgcaggtcacagacaagaaatattggcagtttcctggtcacca
cgttgtgaatatgtcttggcaactgcaagtgctgacagtagagtaaaattatgggatgtg
agaagagcatcaggatgtttaattactcttgatcagcataatggaaaaaagtcacaagct
gttgaatcagcaaacactgctcataatgggaaagttaatggcttatgctttacaaatgat
gggcttcatctccttactgttggtacggataatcggatgaggctctggaatagttccagt
ggagaaaatacactagtaaactatggaaaagtttgtaatgacagcagaaaaggattgaaa
ttcactgtctcctatggctgcagttcagaatttgtttttgtaccatatggtagcaccatt
gctgtttatacaatttactcaggagaacagataactatgcttaagggacattataaaagt
gttgactgctgtgtgttccagtctaatttccaggaactttatagtggcagcagagactgc
aatatacttgcttgggtaccatccttatatgaaccagttccagatgatgatgagcctacc
accaaatcacaattaaatccagcatttgaagacgcatggagtagcagtgatgaggaagga
tga
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integrated database retrieval system
