Nyctereutes procyonoides (raccoon dog): 129514994
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Entry
129514994 CDS
T09008
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129514994 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npo03019
]
129514994 (CPSF2)
Messenger RNA biogenesis [BR:
npo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
129514994 (CPSF2)
U7-dependent histone pre-mRNA processing factors
129514994 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
129514994
NCBI-ProteinID:
XP_055189664
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDEHFSMDIIDSLRKHVHQIDAVLL
SHPDPLHLGALPYAVGKLGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHGLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDPKNSIILTYRTT
PGTLARFLIDNPSEKITEIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDVEEDIDQPSAHKMKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGDEPMDQDLSDVPTKCISTTESIEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLIIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELKDDGEDS
EMQVDAPSDSSVIAQQKAMKSLFGDDEKETGEESEIIPTLEPLPPHEVPGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNQVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatctattatcaaattaactaccctctctggggttcaagaagagtctgctctttgc
tatcttctgcaagttgatgagtttagatttctgttggactgtggctgggatgagcacttt
tctatggatattatagattccctgaggaagcatgttcaccaaattgatgcagtactgttg
tctcaccctgatcctctgcatcttggtgccctcccgtacgccgtcggaaagctgggtctg
aactgtgctatctacgcaaccattccggtttataaaatgggacagatgttcatgtatgat
ctttaccagtctcgacacaatacagaagactttacactctttacattagatgatgtggat
gcagcctttgataagatacagcagttaaaattctctcagattgtgaatttgaaaggtaaa
ggacatggcttgtctatcacacctctgccagctggtcatatgataggtggaacaatatgg
aaaatagtcaaagatggagaagaagaaattgtttacgcagttgactttaaccacaagagg
gagatccatttaaatggatgttccctggaaatgctaagcagaccctccctgcttatcaca
gattcatttaatgctacgtatgtgcagcctaggagaaaacagagagacgagcaacttctg
acaaatgtcctggaaacacttcgaggtgatggaaatgtattaatagcagtggacactgca
ggcagagttttggaacttgctcaacttcttgatcagatctggagaactaaagatgcagga
ctgggtgtctactcactggcgctcctgaataatgtcagctataatgtggtggagttttct
aagtcccaggtagaatggatgagtgacaaattgatgagatgttttgaagacaaaagaaac
aatccatttcagtttcgtcatctctctttatgtcatggtctttctgacttggctcgagta
cctagccccaaagtagtactcgccagccagcctgacctggaatgtggattttcaagggat
ctcttcattcaatggtgtcaggaccctaaaaattcaatcattctaacttacagaactact
cctgggactttagcacgtttcctaattgataatccttctgaaaaaattacagaaatagag
ttgaggaaacgtgtgaagcttgaaggaaaagaactagaagaatacttagaaaaagagaaa
ctaaagaaagaggcagcaaaaaaacttgagcagtcaaaagaggcagacatagattccagt
gatgagagtgatgttgaggaagacattgaccagccatcagctcataagatgaagcatgac
ctgatgatgaaaggtgaaggtagtcggaaaggaagtttcttcaaacaggctaaaaagtct
taccctatgtttcctgccccagaagaaagaattaaatgggatgaatatggagaaattatc
aaaccagaagatttcttagttccagaactccaagcgactgaagaagagaaaagcaaatta
gaatctggcttgacaaatggagatgaacccatggatcaggacttatctgatgttcctacc
aagtgtatttctacaacagagtctattgaaataaaagccagagttacttacatagactat
gaaggacgctctgatggagattccattaaaaagatcattaatcagatgaaaccacgacag
ttaatcattgtccatggaccaccagaggccagtcaggatctcgcagagtgctgtcgtgca
tttggtgggaaagatattaaagtgtacatgccaaagctacatgaaacagttgatgccact
agtgaaactcatatctaccaggtgagattgaaagattcactcgtcagctcccttcagttt
tgtaaggcaaaagatgctgaattagcttggatagacggtgtcttggacatgagagtttcc
aaagtggacacaggagttattttagaagaaggagaactgaaggatgatggagaagactcc
gaaatgcaagtggacgctccttcggattccagcgttatagcacaacagaaggccatgaag
agtctgtttggggatgatgagaaagagacaggtgaagaaagcgagatcattccaaccttg
gaaccattgcctccccacgaggttcctggacatcagtcagtttttatgaacgaaccaaga
ctgtcagacttcaaacaagttcttttacgggaggggattcaagctgaatttgtaggaggt
gtgcttgtttgtaacaatcaagtagcggtccgtagaacggaaactggacgcattggatta
gaaggctgcctttgtcaagatttttataggataagagaccttttatatgaacagtatgcc
attgtgtaa
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integrated database retrieval system
