Nyctereutes procyonoides (raccoon dog): 129516294
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Entry
129516294 CDS
T09008
Symbol
PCDH20
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
129516294 (PCDH20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
npo01009
]
129516294 (PCDH20)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
npo04515
]
129516294 (PCDH20)
Protein phosphatases and associated proteins [BR:
npo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129516294 (PCDH20)
Cell adhesion molecules [BR:
npo04515
]
Cadherins
Protocadherins
129516294 (PCDH20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
129516294
NCBI-ProteinID:
XP_055191579
LinkDB
All DBs
Position
Unknown
AA seq
952 aa
AA seq
DB search
MRGRGNARCSRAPALSWRPATRHPRLDMGRPSRPRSSSSRSHLPHLFLLFLFVGPFSCLA
SYSRATELLYSLNEGLPAGVLIGSLAEDLRLVPRAPGRQDQLSQLPERAVAERTPPLSFS
LASRGLSGQYVTLDNRSGELHTSAQEIDREALCLEGGGGAAWGGSISISSSPSSDSCLLL
LDVLVLPQEYFRFVKVKIAIRDVNDNAPQFPVSQISVWVPENAPINTRLAIEHPAMDPDI
GTNGVQTYRLLDYHRMFTLDVEENENGERTPYLIVMGLLDRETQDQYVSIIIAEDGGSPP
LLGSATLTIGITDINDNCPLFADSQINVTVFGNATVGTPVAAVQAVDRDLGTNAQITYSY
SQKVPQASKDLFHLDETTGVIKLFSKIGGSVLQTHKLTILANGPGCIPAVTTALVTIIKV
IFRPPEIVPRYIANEVDGIVYLKELEPINTPIAFFTIRDPEGKYKVNCYLDGEGPFRLSP
YKPYNNEYLLETTKLMDYELQQFYEIAVVAWNSEGFHVKKIIKVQLLDDNDNAPVFLQPL
LELTIEENNAPNAFLTKLYATDADSGERGQVSYFLGPDAPSYFSLDSVTGILTVSTQLDR
EEKEKYRYTVRAVDSGKPPRESVATVALTVLDKNDNSPRFINKDFSFFVPENFPGYGEIG
VISVTDADAGRNGWVALSVVNQSDIFVIDTGKGMLRAKVSLDREQQSSYTLWVEAVDGGE
PALSSTAKITILLLDINDNPPLVLFPQSNMSYLLVLPSTLPGSPVTEVYAVDKDTGMNAV
IAYSIIGRRGPRPESFRIDPKTGNITLEEALLQTDYGLHRLLVKVSDHGYPEPLHSTVMV
NLFVNDTVSNESYIESLLRKEPEINIEEKEPQISIEPTHRKIESGSCVPTLVALSVISLG
SITLVTGMGIYICLRRGKKHHREDENLEVQIPLKGKIDLHMRERKPMAISNI
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgagggaacgcgcgctgctcgcgggccccggctctgagctggcgcccggcg
acccggcacccgcgcctggatatggggcgtccaagtcgtcccaggagcagcagcagccgc
agccacctgccgcatctgttcctgcttttcctcttcgtgggacccttcagctgcctcgcg
agttacagccgggccacggagcttctgtacagcctgaacgagggactgccggcgggggtg
ctcatcggcagcctggcggaggacctgcggctggtgccccgcgcgcccgggaggcaggac
cagctgtcgcagctgcccgagcgcgcggtcgcggagcgcaccccccctctctccttcagc
ctggcctcccggggactgagcggccagtacgtgaccctagacaaccgctccggggagctg
cacacttctgcccaggagatcgaccgggaggccctgtgtcttgaaggaggtggcggagcc
gcctggggcggcagcatttccatctcctcctccccttcctcggactcttgtcttttgctt
ttggatgtactggtcctgcctcaggaatactttaggtttgtcaaggtgaagatcgccatc
cgggacgtcaatgacaatgccccccagttccccgtttcccagatctctgtctgggtcccg
gaaaatgcacctataaacacccggctcgccatagagcatcctgccatggacccagatata
ggcactaatggggtgcagacctaccgcttactggactaccatcgcatgttcaccctggat
gtggaggagaacgagaatggggagcgcactccctacctcattgtcatgggactattggac
agggagacccaggaccagtacgtgagcatcatcatagcagaggatggtgggtctccacca
ctgttgggcagcgccaccctcaccattggcataactgacattaatgacaattgccctctc
ttcgctgactcacaaatcaatgtcactgtgtttgggaatgctacagtgggcacaccggtc
gcagctgtccaggctgtggatagagacttgggaaccaatgctcagatcacctactcttac
agccagaaagttccccaagcgtccaaggatttattccatctggatgaaaccaccggagtc
attaaacttttcagtaagattgggggaagtgttctgcaaactcacaagctcaccatcctt
gctaatgggccgggctgcatccctgctgtgaccacagccctggtgaccattatcaaagtt
attttcagaccacctgaaattgttcctcgttatatagcaaatgaggtagatggtattgtt
tacctgaaagaactagaacccattaacactccaattgcattcttcaccataagagatcca
gaaggtaaatacaaggtgaactgctacctggacggtgaaggaccatttaggttatcaccc
tacaaaccatacaataatgagtatttgctggaaaccacaaaactaatggactatgagcta
cagcagttctatgaaatagctgtggtggcctggaactctgagggatttcatgtcaaaaaa
attattaaagtgcaacttttagatgacaatgacaatgctcctgttttccttcaacccttg
ctggaactaactattgaagaaaataatgcacccaatgcctttttgactaagctgtatgcg
acagatgctgacagtggagagagaggccaagtttcatatttcctgggacctgatgcccca
tcatatttttccttagacagtgtcacaggaattctgacagtttccactcagctggaccga
gaagagaaagaaaagtacaggtacacagtcagagctgttgactctggaaagccacccagg
gaatcagtagccactgtggctctcacagtgttggataaaaatgacaacagtcctcggttt
atcaacaaggacttcagcttttttgtgccagaaaactttccagggtatggtgagattggg
gtaattagtgtaacagatgccgatgccggacgaaacggatgggttgccctctcggtggtg
aaccagagtgatatttttgtcatagacacaggaaagggcatgctgagagccaaagtctct
ttggacagagagcagcaaagctcctatactttgtgggttgaagctgttgacgggggtgag
cctgccctctcttcgactgcaaaaatcacaattctgcttcttgatatcaatgacaaccct
cctcttgttttatttcctcagtctaacatgtcctacctgttggtactgccttctacactt
cccggctcaccagttacagaggtctatgctgttgacaaagacacaggcatgaatgctgtc
atagcttacagcatcattggaagaagaggtcctcggcctgagtcctttaggattgaccct
aaaaccggcaacattactttggaagaggcgctgctgcagacagactatggactccatcgt
ttactagtgaaagtgagcgatcatgggtatcccgaacctctccattccacagtcatggtg
aacctgtttgtcaatgacactgtcagtaatgagagctacatcgagagtcttttaagaaag
gaaccagaaattaacatagaggagaaagaaccacagatctcaatagaaccaacccatagg
aaaatcgagtctgggtcctgtgtgcccaccctcgtagctctgtctgtaataagcttgggt
tctatcacacttgtaacagggatgggcatatacatctgtttaaggagggggaaaaagcac
cacagggaagacgaaaatttggaagtacaaattccactcaaaggaaaaattgacttgcat
atgagagagaggaaaccaatggctatttctaatatttga
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integrated database retrieval system
