Nyctereutes procyonoides (raccoon dog): 129516555
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Entry
129516555 CDS
T09008
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129516555 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npo04121
]
129516555 (LMO7)
Ubiquitin system [BR:
npo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129516555 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_2
PDZ_6
Motif
Other DBs
NCBI-GeneID:
129516555
NCBI-ProteinID:
XP_055191981
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MEEPGADCAVAFAEARRWVEAVTEKNFETKDFRASLENGVLLCDLVNKLKPGVIKKINRL
STPIAGLDNINVFLKACEQIGLKEAQLFHPGDLQDLSNRVTVRQEETDRRVKNVLITLYW
LGRKAQSNPYYNGPYLNLKAFENLLGQALTKALEDASCLKRSGRDSGYGDIWCAERGDFP
TSPGNHKREDSFESLDSLGSRSFTSCSSDITLRGGREGCESDTDSEFTSKMQDYNKDDMS
YRRISAIEPKTALPFNRFLPNKSRQPSYVPAPLRKKKPDKNEDNRRSWASPVYPEADGTF
PSGHTGNPLISHQISRAEWDFSNPACCQKEVYGSESGSDSEDERRLPDIVLDDLANRRFR
VKKRPECFISKTTSPSSCSQRFPPADPLATGLYKLTSNERRTWGTNVENWPTVQETSSSS
CYLEEEREKTRTPNIIKDDLYVRKLSPIMPNPGNAFDQFLPKCWIPEDVNWKRIKRETYK
PWYKEFQGFRRNSDSEDEDLGSDRSSSIFSRIQKAKHRLDSNCQRRSLLLELATKGARSS
RNTHAARRTSGSADEPSQFLLLQALQTYSDDILASETNIKIDPTAGPRLITRRKNLSSAP
GCKRDDLEMPTLDPDLENDDFFVRKTGAFHANPYVLRAFEDLRRFSEPDDSVERDIILQC
REGELVLPDLEKDDMIVRRIPAQKKEVPLSGAPERYQPVPLPEPWTLPPEIQAKFLCVLE
RTHPSKEKRKSCGVLVPSSRKKRDDMLTRKIQSWQLGTTVPPVSFTPGPCSEADLRRWEA
IREASRLRHRKRLMVERLFQKIYGENGSKSMSDVSAEDIQNLRQLRYEEMQKIKSQLKEQ
DQKWQDDLAKWKDRRKSYTSDLQKKKEEREEIEKQALEKSERSSKTFKEMLQDRESRNQM
STVTSRRRLHSNDDVLNEEMLSPTLTMSEASYQSERVEEKETMYSTEIPKQDSTTFVKRE
DAVTTDIQLPSQSPMEEQLPESLSSQHSPSTQMESTRVSASLPRSYQKTDTARLTSVVTP
RPFGSQARGISSLPRSYTMDDAWRYNGDVEDDKRTQNSFVSTSVQKPDTSQLASSETEIA
AVGEGVMGLPSPTPSFSSLSQDQAATSKATLSSTSGPDLVSELGEGRSSPQTEVSRSQDQ
FSDMRISINQTPGSGLDFGFTVKWAFSGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFS
YKDTKEWEATMANAKETGNLVMDIRRYGKSDWGKDQPSLPFIRHKTLNLTSMATKIIGSP
ETKWIDTTSGIYNSDKSSSLSITTDFSESLQHSNTESKEINGIRDESNTFESKASEPISL
KNLKRRSQFFEQGSSGFSYSSWVYLCGSSDSVVPDLPVPTLSTPSRWAWDQEEERRRQER
WQREQDRLLQEKYQREQEKLREEWQRAQQEAERENYKYLNEERMVLSSHSLSRPTREPAV
ATWEAAWGEGSKSSDREGTRAGEEERRPQQKEDEEEDQRKRLQEQLALEKERKLKEQQDQ
EEQEWRRRQEEAQEQKPQAERERETTVKIYQYRRPLDSYDIPKREEQSSGLLPSDRNKSR
STTELDGYPANKYGGNKYSDQIGSTSSSQRSSKKEQAPSEAELERQQILQEMRKRTSLLN
DNSWIRQRSSSVNKEPICLPGIMRRGESLDNLDSPRSSSWKPSPWLNQPSGVRASSSVQD
FSRPPPQLVSTSNRAYMRNPSSSIPPPSSAGSVQTTTAPSPTPHSPSPSLSQSGSQLRNR
SVSGKRVCSYCNSILGKGAAMIIESLGLCYHLHCFKCVACECDLGGSSSGAEVRIRNHQL
YCNDCYLRFKSGRPTAM
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcccggggccgactgcgcggtagccttcgccgaggcccggagatgggtggag
gcagtaacagagaagaattttgaaacaaaggattttcgagcttctctagagaatggtgtt
ctgttgtgtgatttggttaataaacttaagcctggtgtcattaagaagattaatagatta
tccacaccgatagcaggtttggataatataaacgtttttttgaaagcttgtgaacagatt
ggattgaaagaagcccagcttttccatcctggggatctacaggatttatcaaaccgagtc
actgtcaggcaagaagagactgataggagagtgaaaaatgttttgataacactgtactgg
ttgggaagaaaagcacaaagtaacccgtactataatggaccctatcttaatttgaaagca
tttgagaatcttttaggacaagctctgactaaggctcttgaagacgctagctgtctgaaa
aggagtggcagggacagtggttacggtgatatctggtgtgctgaacgtggagattttcct
acttctccaggcaaccataagcgagaagattcatttgaaagcttggactctttggggtct
agatcattcacaagctgctcctctgatattacgttgagagggggacgtgagggttgtgaa
agtgacacagattctgaatttacatccaaaatgcaggattataataaggacgatatgtcc
tatcgaaggatttcagcaattgaaccaaaaactgctttaccgttcaatcgttttttgccc
aataaaagtagacagccatcctatgtgccagcgccattgagaaagaaaaagccggacaaa
aacgaggataacagaagaagttgggccagcccggtctatccagaagcagatggaacattt
ccaagtggacacacagggaatcctttaatttcccatcaaattagcagagcagagtgggat
ttttcaaatccagcttgctgtcagaaggaggtgtatggttctgaaagtggttctgactcc
gaggatgaacgaaggttgcctgacatagttttggatgacttagccaaccgtagattccga
gtgaaaaagaggcctgagtgtttcatctcgaaaaccacctctcctagctcttgctcacaa
aggtttcctcctgctgacccattagccactgggctgtacaaattgacgagtaacgagagg
agaacttggggcacaaatgtggagaattggccaaccgtacaagaaacttcaagctcctct
tgttacttggaagaggaaagagaaaagacaaggacacccaacatcataaaggatgatctt
tatgtgcgaaagctaagtcccatcatgccaaacccagggaatgcttttgatcagtttctt
cccaaatgctggatcccagaagatgtgaactggaaaagaataaagagagaaacttacaaa
ccatggtataaagaatttcagggattcaggaggaattcagattctgaggatgaggatttg
ggctctgacagaagctcctccatatttagtagaatccaaaaagcaaagcataggctagac
agcaactgccaaagacgttcactcttgctggaattggctaccaaaggggccaggagctcc
cggaacacccatgcagccaggagaaccagtggttctgcggatgagcccagtcagttttta
ttacttcaggcactccaaacatattctgatgacatcttagcttctgaaacaaatatcaaa
attgatcccactgccggcccaaggctcataacacgcagaaagaatctctcttctgcacca
gggtgtaaaagagatgaccttgagatgccaactctagatcccgacttggagaatgatgat
ttctttgtcagaaagactggggctttccatgcaaatccatatgttctccgggctttcgaa
gacttgagaaggttttccgagccagatgattctgtagagcgagatataattctgcagtgt
agagaaggtgaacttgtacttccagatctagaaaaagatgacatgattgttcgccgaatt
ccagcgcagaagaaagaggtgcctctgtcaggggccccagagagataccaaccagtccct
ctccctgaaccctggactcttcctccagaaattcaagcaaaatttctctgcgtacttgaa
aggacacacccatccaaagaaaaaagaaagagctgtggagtgttagtgccttcctccagg
aagaagagagatgacatgttgactcgcaagatccagtcttggcagctggggacgactgtg
cctcctgtcagtttcactcctggtccctgcagtgaggcagacctgcggaggtgggaggcc
atccgagaggccagccgacttaggcacaggaaacggctgatggttgagagactctttcaa
aagatttatggtgagaatgggagtaagtccatgagtgatgtcagcgcagaggatattcag
aacttgcgtcagctgcgttacgaggagatgcagaaaataaaatcacaattaaaagaacaa
gatcagaaatggcaagatgaccttgcaaaatggaaagatcgtcgaaaaagctacacttca
gatctgcagaagaaaaaagaagagagggaagaaattgaaaagcaggcacttgagaagtcc
gagagaagctctaagacctttaaggaaatgctacaggacagggaatcccgaaaccaaatg
tccacagtgacatcgaggaggaggttgcattctaatgatgatgtgttgaatgaagagatg
ctttctcctacactgactatgtcagaagcaagttaccagagtgagagagtagaagagaag
gaaaccatgtattctacagaaattcctaaacaagattctacaacttttgtgaaaagagag
gacgctgtaaccactgacattcagctaccttctcaaagccccatggaagaacaactccca
gagtctttgtcttctcagcattcaccaagtacacaaatggagtcgactcgagtttcagcc
tctctccccagaagttaccagaaaaccgatacagccaggttaacatctgtggtcacaccg
agaccttttggctctcaggcgaggggaatctcatcactcccaagatcctacacgatggat
gatgcttggaggtataatggagatgtagaagatgataagagaactcagaacagctttgtc
agcacctctgtgcaaaaaccggacacaagccagcttgcttccagcgagacagagatagca
gcggtgggagaaggtgtgatggggctgccctctcctacaccctccttctcatcactttcc
caggaccaagctgccacttctaaagccacactgtcttcaacatctggccctgatttagtg
tctgagcttggagaagggagaagctcaccacagacggaggtctcaagatcgcaggatcag
ttcagtgatatgagaatcagcataaaccagacgcctgggagcggtcttgactttgggttt
acggtaaaatgggcattttctgggatcttcgttgcatcagttgaagcaggtagtccagca
gaattttctcagctgcaggtagatgatgaaattattgctattaacaacactaagttttca
tataaggacacaaaagagtgggaggcaaccatggctaatgctaaagaaactggaaaccta
gtaatggatatcaggcgctatggaaagtctgactggggcaaagaccaaccttccctgcca
tttatacgtcataaaaccctcaatctcaccagtatggctaccaaaattataggttcacct
gaaacaaagtggattgatacaacttctggaatttacaattctgataaatcttcaagtctg
tcaataacgactgatttctcagaaagcctccagcattctaatactgaatctaaggaaatt
aatgggatccgtgatgaaagtaatacttttgaatcaaaagcctctgaacctatttctttg
aaaaacttaaaaaggcgatcacaattttttgaacaagggtcatcaggcttttcttacagt
tcatgggtctacctctgtggaagctcagattctgtggttcctgatcttcccgttccgacg
ctcagtaccccgagccgctgggcatgggatcaagaggaggagcgcaggcggcaggagaga
tggcagagggagcaggaccgcctgctgcaggagaaatatcaacgtgagcaggagaaactc
agggaagagtggcagagggctcagcaggaagctgaaagagagaactacaagtacttgaat
gaggaacggatggtcctgagctcacacagcctttcccggcccactcgggagcccgccgtt
gccacctgggaagccgcctggggtgagggttccaagtcatcagaccgggaaggcacccga
gcaggagaagaggagaggagaccacagcagaaggaggatgaggaggaggaccaaagaaag
aggctgcaggaacagctcgctctggagaaagagaggaaactgaaggagcaacaggatcaa
gaagagcaggagtggcgtcggcgtcaagaggaggcccaggagcagaagccccaggcagaa
agagagagggaaaccacagtcaaaatataccagtacagaaggcctcttgattcctatgat
ataccaaagagagaagaacagtcttcagggttgcttcctagtgacaggaataaatccaga
tccactactgaactggatggttaccctgcaaataaatatggaggcaataaatattcagac
caaattgggagcactagctcatcacagaggagctccaagaaggaacaagccccatcagaa
gcagagttagagagacaacaaattcttcaagaaatgaggaagaggacatctcttctcaat
gacaatagctggatccgacagcgcagttccagtgtaaataaagagccgatttgtctgcct
gggattatgagaagaggtgaatctctagataaccttgattccccaagatccagttcttgg
aaaccatccccttggctcaatcagccttcaggagtccgtgcttcttcctctgttcaagac
tttagtcgcccccctcctcagctggtgtccacgtcgaaccgtgcctacatgcggaatcca
tcttccagcatcccccctccttcttcagctggttctgtgcagaccaccaccgcaccttct
cccacaccacacagtccttctccttcactatcacagtcgggctcccagctacgcaacagg
tcagtgagtgggaagcgcgtgtgctcctactgtaatagcattctgggcaaaggagctgcc
atgatcatcgagtccctgggtctttgttatcatttgcattgttttaagtgtgtggcctgc
gagtgtgacctcggaggctcctcctcaggagccgaagtcagaatcagaaaccatcaactg
tactgcaacgactgctatctcagattcaaatctggacggccaactgccatgtga
DBGET
integrated database retrieval system
