Nyctereutes procyonoides (raccoon dog): 129517705
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Entry
129517705 CDS
T09008
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
npo
Nyctereutes procyonoides (raccoon dog)
Pathway
npo04151
PI3K-Akt signaling pathway
npo04382
Cornified envelope formation
npo04510
Focal adhesion
npo04512
ECM-receptor interaction
npo04518
Integrin signaling
npo04820
Cytoskeleton in muscle cells
npo04926
Relaxin signaling pathway
npo04933
AGE-RAGE signaling pathway in diabetic complications
npo04974
Protein digestion and absorption
npo05146
Amoebiasis
npo05165
Human papillomavirus infection
npo05200
Pathways in cancer
npo05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
npo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129517705 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129517705 (COL4A5)
04518 Integrin signaling
129517705 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129517705 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129517705 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
129517705 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
129517705 (COL4A5)
09158 Development and regeneration
04382 Cornified envelope formation
129517705 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129517705 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
129517705 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129517705 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
129517705 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129517705 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npo04147
]
129517705 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
npo00536
]
129517705 (COL4A5)
Exosome [BR:
npo04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129517705 (COL4A5)
Glycosaminoglycan binding proteins [BR:
npo00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129517705 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129517705
NCBI-ProteinID:
XP_055193664
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MKLRGVSLAAGWFLLALSLWGQPAEAAACYGCSPGSKCDCSGVKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGPAGPTGLPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPTDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGMKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDVGSTGPPGLVIPRPGTGVTVGEKGN
MGLPGLPGEKGERGFPGIQGPPGLPGPPGTAVMGPPGPPGFPGERGQKGDEGPPGISIPG
SPGLDGQPGAPGLRGPPGPPGPHISPSDEICETGPPGPPGSPGDRGLQGEQGVKGDKGDT
CFNCIGTGVSGPRGQPGLPGLPGPPGSLGFPGQKGEKGHAGLTGPKGLTGIPGAPGPPGF
PGSKGEPGDVLTFPGMKGDKGELGYPGSPGLPGLPGTPGQDGLPGLPGPKGEPGGIAFKG
ERGPPGNPGLPGLPGNRGPMGPVGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTIT
QPGKPGLPGNPGRHGEVGLPGDPGLPGPPGLPGIPGNKGEPGIPGIGLPGPPGPKGFPGI
QGPPGAPGTPGRIGLEGPSGPPGFPGPKGEPGLGLPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGLPGHTGLDGLPGPKGDVGPKGQPGTVGPPGLPGIGVQGPPGPPGIPGPVGQPGLHG
IPGEKGDPGPPGFDVLGPPGERGSPGIPGAPGPMGPPGTPGLPGKAGTSGFPGAKGEMGM
MGPPGPPGPLGIPGRSGIPGLKGDNGLQGQPGPPGPAGEKGGKGEPGLPGPPGPVDPDLL
GSKGEKGDPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPSGPKGNPGLPGKPGLT
GPPGLKGSIGDMGFPGPQGVKGSPGPPGVPGQPGSPGLPGQKGEKGDPGVSGIGLPGLPG
PKGEAGLPGYPGNPGIKGSMGDTGLPGLPGTPGAKGQPGLPGFPGTPGLPGPKGINGPPG
NPGLPGEPGPVGGGGRPGPPGPPGEKGNPGQDGIPGPAGQKGEPGQPGFGIPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFQGFPGVQGPPGPPGSPGPALEGPKGNPGPQGPP
GRPGLPGPEGPRGLPGNGGIKGERGNPGQPGQPGLPGLKGDQGPPGIQGNPGRPGLNGMK
GDPGLPGVPGFPGMKGPSGVPGSAGPEGDPGLVGPPGPPGLPGPSGQSIIIKGDVGPPGI
PGQPGLKGLPGLPGPQGLPGPIGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGTRGLDGP
PGPDGMQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPHGTVQIYEGFSLLYVQGNKRAHG
QDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMEPLKGQSIQPF
ISRCAVCEAPAVVIAVHSQTIQIPHCPHGWDSLWIGYSFMMHTSAGAEGSGQALASPGSC
LEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTRISRCQV
CMKRT
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggctggttcttactggccctgagtctttgg
gggcagcccgcagaggctgcggcttgctatgggtgttctccaggatcaaaatgtgactgt
agtggtgtaaaaggagaaaagggggagagaggatttccgggtttggaaggccatccaggt
ttgcctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaagggatcagaggtcctcctggacttcctggattt
ccagggacaccgggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
atccctggatgcaatggaaccaagggagaacgtggatttccaggcagtcctggttttcct
ggtctacagggtcctccgggacctcctgggatcccaggtatgaagggagaaccaggtagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggccccgctggtcccactggtttaccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaaaggtgaaaagggtgagcaaggtcttcagggtccccctggtcct
cctgggcagatcagtgaacagaaaagaccaactgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccaggtcct
ccaggtggtatgaaaggtgagaagggtgaacaaggagagcctggcaaaagaggtaaaccg
ggcaaagatggagagaatggccaaccaggaattccaggtttacctggtgatcctggttac
cctggtgaaccaggaagggatggagaaaagggccaaaaaggggacgttggctcaactggg
cctcctggacttgtaattcctaggcctgggaccggtgtaactgtaggagagaaaggaaac
atggggttacctggcttgcctggagaaaaaggagagcgaggatttcctggaatacagggt
ccacctggccttcctggacctccagggactgcagttatgggtcctcctggcccccctggc
tttcctggagaaaggggccagaaaggtgatgaagggccacctggaatatctattcctgga
tctcctggacttgatgggcagcctggggctcctggacttcgagggcctcctggccctcct
ggccctcacatctctcctagtgatgagatatgtgaaacaggccctcctggccctcccgga
tctccaggtgatagaggacttcaaggagaacaaggagtgaaaggtgacaaaggtgatacc
tgcttcaactgtattggaactggcgtttcagggcctcgaggtcaacctggtctcccaggt
cttccaggtcctccaggatctcttggtttccctggacagaagggagaaaaaggacatgct
ggtctaaccggtcccaaaggattaacaggcataccgggagctccaggtcctccaggcttt
cctggatctaaaggtgaacctggtgacgtcctcacttttccaggaatgaagggtgacaaa
ggagagttgggttaccctggatcccctgggcttcctggtttacctggaacccctggacag
gatggactgccagggcttcctggccccaaaggagaacctggtggaattgcttttaagggt
gaaagaggtccccctgggaatccaggcttgccaggtctcccagggaatagggggcctatg
ggccctgtgggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggtgatccaggtcagaccataacc
cagccagggaagcctggcctgcctggtaatccaggcagacatggtgaggtagggcttcca
ggtgaccctggacttcccggcccgccgggcttgccaggaatacccggtaataaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcccaaaggttttcctggaatt
caaggacctccaggagcacctgggacacctggaagaattggtctagaaggcccttctggg
ccaccaggctttccaggaccaaagggagaaccaggacttgggctgcctgggccacctgga
cccccaggactcccaggtttcaaaggaacacttggtccaaaaggagatcgtggtttccca
ggacctccaggtcttcccggacatactggcttggatgggctccctggaccaaaaggtgat
gttgggccaaagggacaacctgggacagtgggacctcctgggcttccaggaataggtgtt
cagggaccaccagggccaccagggattcctggaccagtaggtcaacctggcctacacgga
ataccaggagagaagggagatccagggcctcctgggtttgatgttctaggaccccctggt
gagagaggcagtccagggattcctggagcacctggtcctatgggacccccaggaacacca
gggcttccaggaaaagcaggaacctctggatttccaggtgccaaaggtgaaatgggtatg
atgggacctcccggccctccaggacctttgggaattcctggcaggagtggtattcctggt
ctaaaaggtgataatggtttgcagggtcagccaggacctcctggccctgcaggagaaaaa
ggtggtaaaggagagcctggccttccaggccctcctggaccagtggatccagatctgttg
ggctcaaaaggagagaagggggaccctggcttaccaggtattcccggagtttcagggcca
aaaggttaccagggtttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccatcaggtcccaaaggtaaccctggcctccctgggaaaccagggcttaca
ggacctcctgggcttaaaggaagcataggtgatatgggttttccaggtcctcagggtgtg
aaagggtctcctggacctcctggagttcctggacaacctggctccccaggattacctgga
caaaaaggtgaaaaaggtgatcctggtgtttcaggcattggtcttccaggtcttcctggc
ccaaagggtgaagctggtcttcctggatacccaggaaaccctggaatcaaaggttctatg
ggagatactggtttgcctggattaccagggacccctggagcaaaaggacaaccaggcctt
cctggattccccggaaccccaggacttcctggaccaaaaggtattaatggtcctcctggg
aaccctggccttccaggagaacctggtcccgtaggtggtggagggcgtcctgggccacca
gggcctccaggtgaaaaaggcaacccaggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaatcccaggaccccctggactcccaggactt
tctggtcaaaagggtgatggaggattacctggcattccaggaaaccctggccttcctggt
ccaaaaggagaaccaggctttcagggtttccctggtgtccagggtcccccaggccctcct
ggctctccaggtccagctctggaaggccctaaaggcaaccctgggcctcagggtcctcct
gggagaccaggtctaccaggtccagaaggtccccggggtctccctggaaatggaggtatt
aaaggagagagaggaaacccaggccaacctgggcaacctggtttgcctggcttgaaagga
gatcaaggaccaccaggaatccagggtaatcctggccgtccaggtctcaatggaatgaaa
ggagatcctggtctccctggtgttccaggatttccaggtatgaagggacccagtggagta
ccaggttcagctggccctgagggggatccaggacttgttggcccaccaggtccccctgga
ctacctggtccttcaggacagagtattataatcaaaggagatgttggtccaccagggatc
ccagggcagcctggattaaaaggtctaccaggactaccaggacctcagggcttaccaggt
ccaattggccctccaggagatccaggacgcaacggactccctggctttgacggcgctgga
gggcgcaaaggagacccaggtctgccaggccagccaggtacccgtggtttggatggtccc
cctggaccagatggaatgcaaggtcctccaggtcctccaggaacttcctctattgcccat
ggattcctcatcacacgtcacagccagacaacagatgcaccacaatgcccacatggaact
gtccagatttatgaaggcttttctctcttatatgtccaaggaaataaaagagctcacggt
caagacttggggacggctggcagttgccttcgtcgcttcagtaccatgcctttcatgttc
tgcaacatcaacaatgtttgcaactttgcttcaagaaatgactattcttactggctgtct
accccagagcccatgccaatgagcatggagcccctgaagggccagagcatccagccattc
attagtcgatgtgcagtatgcgaagctccagctgtggtgattgcagttcacagtcagacc
atccagattccccattgtcctcacggatgggattctctctggattggctattccttcatg
atgcacacgagcgcaggagcagagggctcaggtcaagccctggcctcccctggttcctgc
ttggaagagtttcgttcagctcctttcattgaatgtcatgggcggggtacctgcaactac
tatgccaactcctacagcttttggctagcaactgtagatgtgtcagatatgttcagcaaa
cctcagtcagaaacactgaaagcaggagacttgaggacacgtattagccgatgtcaagtg
tgcatgaagaggacataa
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integrated database retrieval system
